DN617686
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617686 vs. ExPASy Swiss-Prot
Match: EXP15_ORYSJ (Expansin-A15 OS=Oryza sativa subsp. japonica GN=EXPA15 PE=2 SV=2) HSP 1 Score: 231.491 bits (589), Expect = 2.632e-60 Identity = 104/163 (63.80%), Postives = 127/163 (77.91%), Query Frame = 2 Query: 131 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCG--GDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRV 613 W S ATFYGGSDASGTMGGACGYGNLY GYG NTAALS+ALFN+G SCG C+++ C +P+WC G + IT TN CPPN+A S++GGWCNPPR HFD+A P +L++ Y+AGIVPV Y+RVPC K+GG+RFT+ GF YF LVL++NVAG+G I V Sbjct: 32 WSSGTATFYGGSDASGTMGGACGYGNLYWSGYGTNTAALSSALFNDGASCGQCYQIACDHQAEPRWCLQGR-TVTITGTNLCPPNYALSSNDGGWCNPPRTHFDMAEPAWLQIGIYKAGIVPVLYQRVPCVKQGGVRFTMGGFNYFELVLISNVAGSGSIQSV 193
BLAST of DN617686 vs. ExPASy Swiss-Prot
Match: EXPA1_ORYSJ (Expansin-A1 OS=Oryza sativa subsp. japonica GN=EXPA1 PE=2 SV=2) HSP 1 Score: 230.72 bits (587), Expect = 4.489e-60 Identity = 108/169 (63.91%), Postives = 125/169 (73.96%), Query Frame = 2 Query: 116 FAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCG--GDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVS 616 F W A ATFYGGSDASGTMGGACGYG+LYS GYG NTAALST LFN+G SCG C+ + C D ++C G ++ ITATN CPPN+A P+D GGWCNPPR HFD+A P +LK+ Y GIVPV Y+RVPC K+GG+RFTING YF LVLV+NV G G I VS Sbjct: 29 FTASGWNKAFATFYGGSDASGTMGGACGYGDLYSTGYGTNTAALSTVLFNDGASCGQCYRIMCDYQADRRFCISGT-SVTITATNLCPPNYALPNDAGGWCNPPRQHFDMAEPAWLKIGVYVGGIVPVMYQRVPCAKQGGVRFTINGRDYFELVLVSNVGGVGSIQSVS 196
BLAST of DN617686 vs. ExPASy Swiss-Prot
Match: EXP25_ORYSJ (Expansin-A25 OS=Oryza sativa subsp. japonica GN=EXPA25 PE=2 SV=2) HSP 1 Score: 229.95 bits (585), Expect = 7.658e-60 Identity = 103/164 (62.80%), Postives = 128/164 (78.05%), Query Frame = 2 Query: 131 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKC--GGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVS 616 W ATFYGG+DASGTMGGACGYGNLY+ GYG NTAALS+ LFN+G SCG C+ + C PQWC G A+ ITATN CPPN+A PS++GGWCNPPRPHFD+A P +L++ Y+AGI+PV Y++V C ++GGIRFT+ GF +F LVLV+NVAG+G + VS Sbjct: 27 WNKGTATFYGGADASGTMGGACGYGNLYTAGYGTNTAALSSVLFNDGWSCGQCYLIMCDAAATPQWCRAG-AAVTITATNLCPPNWALPSNSGGWCNPPRPHFDMAEPAWLQIGIYKAGIIPVLYQQVKCWRQGGIRFTMGGFNFFELVLVSNVAGSGSVRSVS 189
BLAST of DN617686 vs. ExPASy Swiss-Prot
Match: EXP31_ORYSJ (Expansin-A31 OS=Oryza sativa subsp. japonica GN=EXPA31 PE=2 SV=2) HSP 1 Score: 229.565 bits (584), Expect = 1.000e-59 Identity = 106/174 (60.92%), Postives = 128/174 (73.56%), Query Frame = 2 Query: 98 AKIPGVFAGGP---WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGD--PQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDI 604 A + AGG W A ATFYGGSD SGTMGGACGYGNLY QGYGV+ AALS ALFN+G SCG C+ + C PQWC G A+ +TATN CPPN+A PSD GGWCNPPRPHFD++ P + ++ Y+AGIVPV Y+RV C ++GG+RFT+ G YF LVL+TNVAG+G + Sbjct: 14 AVVAACAAGGAVADWSPATATFYGGSDGSGTMGGACGYGNLYDQGYGVDNAALSQALFNDGASCGQCYLIVCDTSRAPQWCKAGT-AVTVTATNLCPPNWALPSDGGGWCNPPRPHFDMSQPAWEQIGVYQAGIVPVLYQRVRCWRQGGVRFTVAGLNYFELVLITNVAGSGSV 186
BLAST of DN617686 vs. ExPASy Swiss-Prot
Match: EXP18_ARATH (Expansin-A18 OS=Arabidopsis thaliana GN=EXPA18 PE=2 SV=1) HSP 1 Score: 228.024 bits (580), Expect = 2.910e-59 Identity = 103/163 (63.19%), Postives = 121/163 (74.23%), Query Frame = 2 Query: 116 FAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDI 604 +AG PW++A ATFYG S TMGGACGYGN+Y GYGV T ALSTALFN G +CG CF+LKC P C G+PA ++TATN CPPN+ Q S+NGGWCNPPR HFDL P F+K+A ++AGI+PVSYRRV C+K GGIRF G Y+ LV V NV G GDI Sbjct: 26 YAGTPWRTASATFYGDDTGSATMGGACGYGNMYDSGYGVATTALSTALFNEGYACGQCFQLKCVSSPN-CYYGSPATVVTATNICPPNYGQASNNGGWCNPPRVHFDLTKPAFMKIANWKAGIIPVSYRRVACKKIGGIRFKFEGNGYWLLVYVMNVGGPGDI 187
BLAST of DN617686 vs. ExPASy Swiss-Prot
Match: EXP27_ORYSJ (Putative expansin-A27 OS=Oryza sativa subsp. japonica GN=EXPA27 PE=3 SV=2) HSP 1 Score: 227.639 bits (579), Expect = 3.800e-59 Identity = 104/168 (61.90%), Postives = 125/168 (74.40%), Query Frame = 2 Query: 119 AGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDP--QWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVS 616 A W A ATFYGG+D SGTMGGACGYGNLY QGYG+ AALSTALFN+G +CG C+ + C D +WC P A+ +TATN CPPN+A PSD GGWCNPPR HFD++ P + ++ YRAGIVPV YRRV C +RGG+RFT+ GF +F LVLV NVAG+G + VS Sbjct: 23 AADDWIPATATFYGGNDGSGTMGGACGYGNLYDQGYGLENAALSTALFNDGAACGQCYLIVCDTDKAGRWCKPRG-AVTVTATNLCPPNWALPSDGGGWCNPPRRHFDMSQPAWERIGVYRAGIVPVLYRRVRCWRRGGVRFTVGGFDHFELVLVANVAGSGSVAAVS 189
BLAST of DN617686 vs. ExPASy Swiss-Prot
Match: EXPA3_ORYSJ (Expansin-A3 OS=Oryza sativa subsp. japonica GN=EXPA3 PE=2 SV=2) HSP 1 Score: 227.254 bits (578), Expect = 4.963e-59 Identity = 101/162 (62.35%), Postives = 126/162 (77.78%), Query Frame = 2 Query: 134 QSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCG-GDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVS 616 QSA ATFYGG D SGTMGGACGYGNLY+ GYG+ AALS+ALFN+G CGAC+ + C +WC PG +I ITATN CPPN+A PS++GGWCNPPR HFD++ P + +A Y+AGIVPV+Y+RVPC++ GGIRF I+G YF LV VTNV G+G + ++S Sbjct: 29 QSAFATFYGGKDGSGTMGGACGYGNLYNAGYGLYNAALSSALFNDGAMCGACYTITCDTSQTKWCKPGGNSITITATNLCPPNWALPSNSGGWCNPPRQHFDMSQPAWENIAVYQAGIVPVNYKRVPCQRSGGIRFAISGHDYFELVTVTNVGGSGVVAQMS 190
BLAST of DN617686 vs. ExPASy Swiss-Prot
Match: EXP33_ORYSJ (Expansin-A33 OS=Oryza sativa subsp. japonica GN=EXPA33 PE=3 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 2.463e-58 Identity = 102/163 (62.58%), Postives = 125/163 (76.69%), Query Frame = 2 Query: 131 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCG-GDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVS 616 W A ATFYGGSD +GTMGGACGYGNLY+ GYG+N AALS+ALFN+G CGAC+ + C WC PG +I ITATN CPPN+A+ SD GGWCNPPR HFD++ P + +A Y+AGIVPV+++RVPC+K GGIRFTI+G YF LV V NV G+G + +VS Sbjct: 23 WTPATATFYGGSDGAGTMGGACGYGNLYNAGYGLNNAALSSALFNDGAMCGACYTIACDTSQSTWCKPGT-SITITATNLCPPNYAKKSDAGGWCNPPRKHFDMSQPAWTSIAIYQAGIVPVNFKRVPCQKSGGIRFTISGRDYFELVTVFNVGGSGVVAQVS 184
BLAST of DN617686 vs. ExPASy Swiss-Prot
Match: EXP11_ARATH (Expansin-A11 OS=Arabidopsis thaliana GN=EXPA11 PE=2 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 5.488e-58 Identity = 104/162 (64.20%), Postives = 123/162 (75.93%), Query Frame = 2 Query: 137 SAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKC--GGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVS 616 + HATFYGGSDASGTMGGACGYG+LYS GYG TAALSTALFN+G SCG C+ + C D +WC G +++ITATNFCPPNFA P++NGGWCNPP HFD+A P + K+ YR GIVPV ++RV C K+GG+RF ING YF LV + NV GAG I VS Sbjct: 28 NGHATFYGGSDASGTMGGACGYGDLYSAGYGTMTAALSTALFNDGASCGECYRITCDHAADSRWCLKG-ASVVITATNFCPPNFALPNNNGGWCNPPLKHFDMAQPAWEKIGIYRGGIVPVVFQRVSCYKKGGVRFRINGRDYFELVNIQNVGGAGSIKSVS 188
BLAST of DN617686 vs. ExPASy Swiss-Prot
Match: EXP12_ORYSJ (Expansin-A12 OS=Oryza sativa subsp. japonica GN=EXPA12 PE=2 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 9.361e-58 Identity = 99/160 (61.88%), Postives = 126/160 (78.75%), Query Frame = 2 Query: 137 SAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCG-GDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRV 613 S ATFYGGSDASGTMGGACGYGNLYS GYG NTAALS+ALFN+G +CG C+++ C + +WC G ++ ITATN CPP++++PS++GGWCNPPR HFD+A P + ++ YR GIVPV+++RV C ++GG+RFTING YF LVL+TNV G G I V Sbjct: 26 SGTATFYGGSDASGTMGGACGYGNLYSTGYGTNTAALSSALFNDGAACGECYQITCDQSNSKWCKAGT-SVTITATNLCPPDYSKPSNDGGWCNPPRQHFDMAQPAWEQIGVYRGGIVPVNFQRVSCTRKGGVRFTINGNSYFELVLITNVGGPGSIKSV 184 The following BLAST results are available for this feature:
BLAST of DN617686 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 88
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617686 ID=DN617686; Name=DN617686; organism=Citrus sinensis; type=EST; length=616bpback to top |