DN617686
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617686 vs. ExPASy Swiss-Prot
Match: EXP17_ORYSJ (Expansin-A17 OS=Oryza sativa subsp. japonica GN=EXPA17 PE=2 SV=2) HSP 1 Score: 196.052 bits (497), Expect = 1.225e-49 Identity = 93/164 (56.71%), Postives = 112/164 (68.29%), Query Frame = 2 Query: 131 WQSAHATFYGGSDASGT-MGGACGY-GNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVS 616 W ATFYG G GGACGY N Y TAALST LF +G CG C+EL+C P WCNPG+P+++IT TN CPPN+ P+D+GGWCNPPR HFD+A P FLKLAQ AGIVPV YRRVPC++ GG+RF + G Y+ L+ V NV GAGD+ +S Sbjct: 52 WHDGSATFYGDPSGMGDDFGGACGYVSNDIVSLYSTKTAALSTPLFADGNGCGQCYELRCVKSP-WCNPGSPSVVITGTNLCPPNWYLPNDDGGWCNPPRHHFDMAPPSFLKLAQRVAGIVPVQYRRVPCQRTGGVRFCLQGNHYWLLLYVMNVGGAGDVSSLS 214
BLAST of DN617686 vs. ExPASy Swiss-Prot
Match: EXP20_ORYSJ (Expansin-A20 OS=Oryza sativa subsp. japonica GN=EXPA20 PE=2 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.147e-47 Identity = 92/168 (54.76%), Postives = 112/168 (66.67%), Query Frame = 2 Query: 119 AGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKC--GGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVS 616 A W ATFYGG+D SGTMGGACGYGNLY Q YG+N AALST LFN+G SCG C+ + C G P WC G AI +T TN+ GGWCN RP+FD++ P + + Y AGIVP+ Y++V C + GG+RF INGF YF LVLVTN+AG+G IV +S Sbjct: 19 ARSDWLPGTATFYGGADGSGTMGGACGYGNLYDQRYGINNAALSTPLFNDGASCGQCYLIICDYGKAPDWCKLGK-AITVTGTNY-----------GGWCNATRPYFDMSQPAWENIGIYSAGIVPILYQQVKCWRYGGVRFIINGFNYFELVLVTNMAGSGSIVSMS 174
BLAST of DN617686 vs. ExPASy Swiss-Prot
Match: EXP13_ARATH (Expansin-A13 OS=Arabidopsis thaliana GN=EXPA13 PE=2 SV=2) HSP 1 Score: 182.57 bits (462), Expect = 1.402e-45 Identity = 84/161 (52.17%), Postives = 108/161 (67.08%), Query Frame = 2 Query: 131 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRV 613 W+ A AT+Y ++ +GGACGYG+L GYG+ T LS LF G CGACFEL+C D +WC PG +I++TATNFC PN+ D GG CNPP HF L + F K+A ++AG +PV YRR+ CRK G +RFT++G F VL+TNVAG+GDI V Sbjct: 40 WRPARATYYAATNPRDAVGGACGYGDLVKSGYGMATVGLSETLFERGQICGACFELRCVDDLRWCIPGT-SIILTATNFCAPNYGFDPDGGGHCNPPNKHFVLPIEAFEKIAIWKAGNMPVQYRRINCRKEGSMRFTVDGGGIFISVLITNVAGSGDIAAV 199
BLAST of DN617686 vs. ExPASy Swiss-Prot
Match: EXP12_ARATH (Expansin-A12 OS=Arabidopsis thaliana GN=EXPA12 PE=2 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 2.025e-44 Identity = 83/165 (50.30%), Postives = 114/165 (69.09%), Query Frame = 2 Query: 131 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCG--GDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQY-RAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVS 616 W AHAT+YG +D+ ++GGACGY N Y G+G +TAALS LF +G SCG C++++C DP+WC G A+ +TATNFCP N +N GWCN PR HFD++ P F ++A+ GIVPV YRRV C++RGG+RFT+ G FN+V+++NV G G + V+ Sbjct: 27 WIRAHATYYGVNDSPASLGGACGYDNPYHAGFGAHTAALSGELFRSGESCGGCYQVRCDFPADPKWCLRG-AAVTVTATNFCPTN-----NNNGWCNLPRHHFDMSSPAFFRIARRGNEGIVPVFYRRVGCKRRGGVRFTMRGQGNFNMVMISNVGGGGSVRSVA 185
BLAST of DN617686 vs. ExPASy Swiss-Prot
Match: EXP10_ORYSJ (Expansin-A10 OS=Oryza sativa subsp. japonica GN=EXPA10 PE=2 SV=2) HSP 1 Score: 177.948 bits (450), Expect = 3.453e-44 Identity = 82/165 (49.70%), Postives = 113/165 (68.48%), Query Frame = 2 Query: 110 GVFAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDI 604 G A W+SA A++Y +D +GGACG+G+L GYG+ T LSTALF G +CG C+E+KC D ++C PG +I++TATNFC PNF P+D GG CNPP HF L + F K+A ++AG++P+ YRRV C + GG+RF + G +F VL++NV GAGD+ Sbjct: 26 GSSALSEWRSAKASYYA-ADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVDDLKYCLPGT-SIVVTATNFCAPNFGLPADAGGVCNPPNHHFLLPIQSFEKIALWKAGVMPIQYRRVNCLRDGGVRFAVAGRSFFLTVLISNVGGAGDV 188
BLAST of DN617686 vs. ExPASy Swiss-Prot
Match: EXP21_ARATH (Expansin-A21 OS=Arabidopsis thaliana GN=EXPA21 PE=2 SV=3) HSP 1 Score: 172.94 bits (437), Expect = 1.111e-42 Identity = 86/163 (52.76%), Postives = 107/163 (65.64%), Query Frame = 2 Query: 131 WQSAHATFYGGSDASGT-MGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVS 616 W A A +YG GT + GACGYG+L GYG+ TAALSTALFN+G SCGAC+E+ C +PQ C G+ I ITAT+ CPP A WC P HFDL++PMF+K+AQ +A +VPV YRRVPC K GG++F + G +L NV GAGDI+ VS Sbjct: 45 WYDARAAYYGDIHGGGTELEGACGYGDLNKHGYGLATAALSTALFNSGASCGACYEIMCSPNPQGCLSGS--IKITATDLCPPGSA-------WCYLPNKHFDLSLPMFIKIAQVKAKMVPVRYRRVPCAKTGGVKFEVKGNPNILTILPYNVGGAGDIIAVS 198
BLAST of DN617686 vs. ExPASy Swiss-Prot
Match: EXP20_ARATH (Expansin-A20 OS=Arabidopsis thaliana GN=EXPA20 PE=2 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 2.561e-39 Identity = 74/163 (45.40%), Postives = 107/163 (65.64%), Query Frame = 2 Query: 131 WQSAHATFYGGSDASGTM--GGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRV 613 W+ A AT D S ++ GGACGYG+L + +A LS LFN G SCGAC E++C +WC G+P++++TAT+FCPPN SD GGWCN P+ H +L+ F +A+ RA ++P+ YRRV C +RGG+RF+++G +F VL++NV G++V V Sbjct: 28 WKIATATLSRDRDGSSSVATGGACGYGDLRQSSFAGYSAGLSGKLFNRGSSCGACLEVRCVNHIRWCLQGSPSVVVTATDFCPPNSGLSSDYGGWCNFPKEHLELSHAAFTGIAETRAEMIPIQYRRVKCGRRGGLRFSLSGSSHFFQVLISNVGLDGEVVGV 190
BLAST of DN617686 vs. ExPASy Swiss-Prot
Match: EXP26_ORYSJ (Expansin-A26 OS=Oryza sativa subsp. japonica GN=EXPA26 PE=2 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 2.832e-38 Identity = 89/178 (50.00%), Postives = 114/178 (64.04%), Query Frame = 2 Query: 98 AKIPGVFAG----GPWQSAHATFYGGSDASGTM-GGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVS 616 AK+P V G GPW HATFYGG DASGT GGACGY + + GYG TAA+S ALF+NG CGAC+ELK GD +++TATN PP NG HFDL MP FL +A+ + G+VPVSYR+V C ++GGI++TI G +N+V+V NV GAGD+V+++ Sbjct: 67 AKMPHVNHGRYKCGPWVDGHATFYGGRDASGTTEGGACGYKD--ADGYGAMTAAVSPALFDNGAGCGACYELK--GD------SGKTVVVTATNQAPPPV-----NG----MKGEHFDLTMPAFLSIAEEKLGVVPVSYRKVACVRQGGIKYTITGNPSYNMVMVKNVGGAGDVVKLT 225
BLAST of DN617686 vs. ExPASy Swiss-Prot
Match: EXP16_ORYSJ (Expansin-A16 OS=Oryza sativa subsp. japonica GN=EXPA16 PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 3.131e-37 Identity = 70/143 (48.95%), Postives = 95/143 (66.43%), Query Frame = 2 Query: 185 GGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRV 613 GGACGYG+L YG TA +S ALF G +CG C+E++C WC G+P +++TAT+FC PN D GGWCN P+ HF+++ FL++A+ +A IVPV +RRV C + GG+RFTI G F VL+TNVA G++ V Sbjct: 52 GGACGYGDLDIFRYGRYTAGVSGALFGRGSACGGCYEVRCVNHVLWCLRGSPTVVVTATDFCAPNLGLSDDYGGWCNFPKEHFEMSEAAFLRVAKAKADIVPVQFRRVSCDRAGGMRFTITGGASFLQVLITNVAADGEVAAV 194
BLAST of DN617686 vs. ExPASy Swiss-Prot
Match: EXB14_ORYSJ (Putative expansin-B14 OS=Oryza sativa subsp. japonica GN=EXPB14 PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.119e-18 Identity = 60/172 (34.88%), Postives = 89/172 (51.74%), Query Frame = 2 Query: 131 WQSAHATFYGGSDASGTMGGACGY-GNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQ-------YRAGIVPVSYRRVPCRKRG---GIRFTINGFRYFNLVLVTNVAGAGDIVRV 613 W AT+YG ++ SGT GGACGY G++ + AA S +++ +G CG+C+++KC G+P C+ G P + + T+ CP GG C HFDL+ F +A+ AG +PV Y RVPC+ +G R +Y+ VLV + G GD+ V Sbjct: 38 WSIGGATWYGPANGSGTDGGACGYQGDVGQPPFNSMIAAGSPSIYESGKGCGSCYQVKCSGNPS-CS-GKP-VTVVLTDLCP---------GGACLEEPVHFDLSGTAFGAMAKPGQDDQLRNAGKLPVQYARVPCKWQGVDIAFRVDAGSNQYYLAVLVEDEDGDGDLSAV 197 The following BLAST results are available for this feature:
BLAST of DN617686 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 88
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617686 ID=DN617686; Name=DN617686; organism=Citrus sinensis; type=EST; length=616bpback to top |