DN617686
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617686 vs. ExPASy Swiss-Prot
Match: EXB10_ORYSJ (Expansin-B10 OS=Oryza sativa subsp. japonica GN=EXPB10 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.730e-11 Identity = 56/178 (31.46%), Postives = 83/178 (46.63%), Query Frame = 2 Query: 122 GGPWQSAHATFYGGSDASGT--MGGACGYGNLYSQGY-GVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQ-------YRAGIVPVSYRRVPCRKRGGIRFTINGFRYFN----LVLVTNVAGAGDIVRV 613 G W A T+YG +G GGACGY ++ + G+N+ + +F +G CG+CFE+KC P+ C+ I IT N P HFDL+ F +A+ +AGI+ + +RRV C+ G + T + + N VLV V G GD+V+V Sbjct: 38 GKQWLEARGTWYGKPKGAGPDDNGGACGYKDIDKAPFLGMNSCG-NDPIFKDGKGCGSCFEVKC-SKPEACSDKPVIIHITDMNTEP--------------IAAYHFDLSGHAFGAMAKEGKDEELRKAGIIDMQFRRVRCKYPGETKVTFHVEKGSNPNYFAVLVKYVGGDGDVVKV 199
BLAST of DN617686 vs. ExPASy Swiss-Prot
Match: EXPB8_ORYSJ (Expansin-B8 OS=Oryza sativa subsp. japonica GN=EXPB8 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.259e-11 Identity = 50/173 (28.90%), Postives = 78/173 (45.09%), Query Frame = 2 Query: 131 WQSAHATFYGGSDASGTM--GGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQ-------YRAGIVPVSYRRVPCRKRG---GIRFTINGFRYFNLVLVTNVAGAGDIVRV 613 W +A AT+YG + +G GGACG+ + + T+ + L+ G CG+C+ ++C +P C+ + IT N+ P + + HFDL+ F +LA+ RAGI+ V + RVPC G G + VLV G GD+ +V Sbjct: 48 WGNAKATWYGQPNGAGAADNGGACGFKKVNQYPFMGMTSCGNQPLYKGGKGCGSCYRVRCNRNPA-CSGNAQTVAITDMNYFPLS--------------QYHFDLSGIAFGRLAKPGRADDLRRAGIIDVQFARVPCEFPGLKVGFHVEEGSSPVYLAVLVEYENGDGDVAQV 205
BLAST of DN617686 vs. ExPASy Swiss-Prot
Match: EXLB1_ARATH (Expansin-like B1 OS=Arabidopsis thaliana GN=EXLB1 PE=2 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 2.259e-11 Identity = 47/163 (28.83%), Postives = 75/163 (46.01%), Query Frame = 2 Query: 137 SAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRG-GIRFTINGFRY---FNLVLVTNVAGAGDIVRV 613 ++ AT+YG D G CGYG + +S L+NNG CGAC++++C P G + + AT+ + D + P+ + +A P + Y G+V V Y+R+PCR G + + I+ Y + +LV V G DI+ V Sbjct: 29 NSRATYYGSPDCKANPRGHCGYGEFGRDINNGEVSGVSWRLWNNGTGCGACYQVRCKIPPHCSEEG---VYVVATD------SGEGDGTDFILSPKAYGRMARP-GTENQLYSFGVVNVEYQRIPCRYAGYNLVYKIHEKSYNPHYLAILVLYVGGVNDILAV 181
BLAST of DN617686 vs. ExPASy Swiss-Prot
Match: MPAL1_LOLPR (Pollen allergen Lol p 1 OS=Lolium perenne PE=1 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 2.951e-11 Identity = 56/178 (31.46%), Postives = 83/178 (46.63%), Query Frame = 2 Query: 122 GGPWQSAHATFYGGSDASGTM--GGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRP-HFDLAMPMFLKLAQ-------YRAGIVPVSYRRVPCRKRGGIRFTINGFRYFN----LVLVTNVAGAGDIVRV 613 G W A +T+YG +G GGACGY N+ + T +T +F +G CG+CFE+KC P+ C+ A+ +T T+ DN P P HFDL+ F +A+ AG + + +RRV C+ + T + + N +LV V G GD+V V Sbjct: 38 GDKWLDAKSTWYGKPTGAGPKDNGGACGYKNVDKAPFNGMTGCGNTPIFKDGRGCGSCFEIKC-TKPESCS--GEAVTVTITD----------DNE---EPIAPYHFDLSGHAFGSMAKKGEEQNVRSAGELELQFRRVKCKYPDDTKPTFHVEKASNPNYLAILVKYVDGDGDVVAV 199
BLAST of DN617686 vs. ExPASy Swiss-Prot
Match: MPAC1_CYNDA (Major pollen allergen Cyn d 1 OS=Cynodon dactylon GN=CYND1 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.854e-11 Identity = 53/178 (29.78%), Postives = 81/178 (45.51%), Query Frame = 2 Query: 122 GGPWQSAHATFYGGSD---ASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQ-------YRAGIVPVSYRRVPCRKRGGIRFTIN----GFRYFNLVLVTNVAGAGDIVRV 613 G W A ATFYG + A GGACGY ++ + TA + +F +GL C AC+E+KC +P C+ + IT N+ + HFDL+ F +A+ +AG + + +RRV C+ G + T + ++ +LV AG G+IV V Sbjct: 15 GSKWLEARATFYGSNPRGAAPDDHGGACGYKDVDKPPFDGMTACGNEPIFKDGLGCRACYEIKC-KEPVECSGEPVLVKITDKNY--------------EHIAAYHFDLSGKAFGAMAKKGQEDKLRKAGELTLQFRRVKCKYPSGTKITFHIEKGSNDHYLALLVKYAAGDGNIVAV 177
BLAST of DN617686 vs. ExPASy Swiss-Prot
Match: MPAP1_PHLPR (Pollen allergen Phl p 1 OS=Phleum pratense GN=PHLPI PE=1 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.585e-11 Identity = 56/179 (31.28%), Postives = 83/179 (46.37%), Query Frame = 2 Query: 122 GGPWQSAHATFYGGSDASGTM--GGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAIL-ITATNFCPPNFAQPSDNGGWCNPPRP-HFDLAMPMFLKLAQ-------YRAGIVPVSYRRVPCRKRGGIRFTINGFRYFN----LVLVTNVAGAGDIVRV 613 G W A +T+YG +G GGACGY ++ + T +T +F +G CG+CFE+KC P+ C+ G P ++ IT N P P HFDL+ F +A+ AG + + +RRV C+ G + T + + N +LV V G GD+V V Sbjct: 38 GDKWLDAKSTWYGKPTGAGPKDNGGACGYKDVDKPPFSGMTGCGNTPIFKSGRGCGSCFEIKC-TKPEACS-GEPVVVHITDDNE---------------EPIAPYHFDLSGHAFGAMAKKGDEQKLRSAGELELQFRRVKCKYPEGTKVTFHVEKGSNPNYLALLVKYVNGDGDVVAV 199
BLAST of DN617686 vs. ExPASy Swiss-Prot
Match: MPAP1_PHAAQ (Major pollen allergen Pha a 1 OS=Phalaris aquatica PE=1 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.585e-11 Identity = 55/178 (30.90%), Postives = 80/178 (44.94%), Query Frame = 2 Query: 122 GGPWQSAHATFYGGSDASGTM--GGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRP-HFDLAMPMFLKLAQ-------YRAGIVPVSYRRVPCRKRGGIRFTINGFRYFN----LVLVTNVAGAGDIVRV 613 G W A +T+YG +G GGACGY ++ + T +T +F +G CG+CFELKC P+ C+ + IT N P P HFDL+ F +A+ AG + + +RRV C+ G + T + + N +LV V G GD+V V Sbjct: 44 GDKWLDAKSTWYGKPTGAGPKDNGGACGYKDVDKAPFNGMTGCGNTPIFKDGRGCGSCFELKC-SKPESCSGEPITVHITDDNE---------------EPIAPYHFDLSGHAFGSMAKKGEEENVRGAGELELQFRRVKCKYPDGTKPTFHVEKGSNPNYLALLVKYVDGDGDVVAV 205
BLAST of DN617686 vs. ExPASy Swiss-Prot
Match: EXPB2_ARATH (Putative expansin-B2 OS=Arabidopsis thaliana GN=EXPB2 PE=2 SV=2) HSP 1 Score: 67.0106 bits (162), Expect = 8.585e-11 Identity = 55/172 (31.98%), Postives = 81/172 (47.09%), Query Frame = 2 Query: 131 WQSAHATFYGGSDASGTMGGACGYGNLYSQ-GYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLA------QYR-AGIVPVSYRRVPCRKRG-GIRFTINGFRYFN--LVLVTNVAGAGDIVRV 613 W A +T+YG G+ GGACGYGN +Q + +A +LF +G CGAC+++KC C+ NP + + T+ CP C HFDL+ F +A Q R G + + Y++V C G + F ++ N VLV V G G+I R+ Sbjct: 47 WSIAGSTWYGNPTGYGSDGGACGYGNAVAQPPFSKMVSAGGPSLFKSGKGCGACYQVKCTSKSA-CSK-NP-VTVVITDECP-----------GCVKESVHFDLSGTAFGAMAISGQDSQLRNVGELQILYKKVECNYIGKTVTFQVDKGSNANSFAVLVAYVNGDGEIGRI 204 The following BLAST results are available for this feature:
BLAST of DN617686 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 88
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617686 ID=DN617686; Name=DN617686; organism=Citrus sinensis; type=EST; length=616bpback to top |