DN617684

Overview
NameDN617684
Unique NameDN617684
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length577
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DN617684 vs. ExPASy Swiss-Prot
Match: ACT_MAYDE (Actin OS=Mayetiola destructor PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 7.011e-17
Identity = 40/42 (95.24%), Postives = 40/42 (95.24%), Query Frame = -2 
Query:  451 ERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 576
            ERKYSVWIGGSILASLSTFQQMWISK EYDESGP IVHRKCF
Sbjct:  335 ERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 376
[Close]
BLAST of DN617684 vs. ExPASy Swiss-Prot
Match: ACT_MANSE (Actin, muscle OS=Manduca sexta PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 7.011e-17
Identity = 40/42 (95.24%), Postives = 40/42 (95.24%), Query Frame = -2 
Query:  451 ERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 576
            ERKYSVWIGGSILASLSTFQQMWISK EYDESGP IVHRKCF
Sbjct:  335 ERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 376
[Close]
BLAST of DN617684 vs. ExPASy Swiss-Prot
Match: ACT_BRUMA (Actin OS=Brugia malayi PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 7.011e-17
Identity = 40/42 (95.24%), Postives = 40/42 (95.24%), Query Frame = -2 
Query:  451 ERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 576
            ERKYSVWIGGSILASLSTFQQMWISK EYDESGP IVHRKCF
Sbjct:  335 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 376
[Close]
BLAST of DN617684 vs. ExPASy Swiss-Prot
Match: ACT6_DROSI (Actin, indirect flight muscle OS=Drosophila simulans GN=Act88F PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 7.011e-17
Identity = 40/42 (95.24%), Postives = 40/42 (95.24%), Query Frame = -2 
Query:  451 ERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 576
            ERKYSVWIGGSILASLSTFQQMWISK EYDESGP IVHRKCF
Sbjct:  335 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 376
[Close]
BLAST of DN617684 vs. ExPASy Swiss-Prot
Match: ACT6_DROME (Actin, indirect flight muscle OS=Drosophila melanogaster GN=Act88F PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 7.011e-17
Identity = 40/42 (95.24%), Postives = 40/42 (95.24%), Query Frame = -2 
Query:  451 ERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 576
            ERKYSVWIGGSILASLSTFQQMWISK EYDESGP IVHRKCF
Sbjct:  335 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 376
[Close]
BLAST of DN617684 vs. ExPASy Swiss-Prot
Match: ACT5_DROME (Actin-87E OS=Drosophila melanogaster GN=Act87E PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 7.011e-17
Identity = 40/42 (95.24%), Postives = 40/42 (95.24%), Query Frame = -2 
Query:  451 ERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 576
            ERKYSVWIGGSILASLSTFQQMWISK EYDESGP IVHRKCF
Sbjct:  335 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 376
[Close]
BLAST of DN617684 vs. ExPASy Swiss-Prot
Match: ACT5_DIPDE (Actin-5 (Fragment) OS=Diphyllobothrium dendriticum GN=ACT5 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 7.011e-17
Identity = 40/42 (95.24%), Postives = 40/42 (95.24%), Query Frame = -2 
Query:  451 ERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 576
            ERKYSVWIGGSILASLSTFQQMWISK EYDESGP IVHRKCF
Sbjct:  330 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 371
[Close]
BLAST of DN617684 vs. ExPASy Swiss-Prot
Match: ACT5_BACDO (Actin-5, muscle-specific OS=Bactrocera dorsalis PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 7.011e-17
Identity = 40/42 (95.24%), Postives = 40/42 (95.24%), Query Frame = -2 
Query:  451 ERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 576
            ERKYSVWIGGSILASLSTFQQMWISK EYDESGP IVHRKCF
Sbjct:  335 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 376
[Close]
BLAST of DN617684 vs. ExPASy Swiss-Prot
Match: ACT4_DROME (Actin, larval muscle OS=Drosophila melanogaster GN=Act79B PE=2 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 7.011e-17
Identity = 40/42 (95.24%), Postives = 40/42 (95.24%), Query Frame = -2 
Query:  451 ERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 576
            ERKYSVWIGGSILASLSTFQQMWISK EYDESGP IVHRKCF
Sbjct:  335 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 376
[Close]
BLAST of DN617684 vs. ExPASy Swiss-Prot
Match: ACT3_DROME (Actin-57B OS=Drosophila melanogaster GN=Act57B PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 7.011e-17
Identity = 40/42 (95.24%), Postives = 40/42 (95.24%), Query Frame = -2 
Query:  451 ERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 576
            ERKYSVWIGGSILASLSTFQQMWISK EYDESGP IVHRKCF
Sbjct:  335 ERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 376
The following BLAST results are available for this feature:
BLAST of DN617684 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 326
Match NameE-valueIdentityDescription
ACT_MAYDE7.011e-1795.24Actin OS=Mayetiola destructor PE=2 SV=1[more]
ACT_MANSE7.011e-1795.24Actin, muscle OS=Manduca sexta PE=2 SV=1[more]
ACT_BRUMA7.011e-1795.24Actin OS=Brugia malayi PE=1 SV=1[more]
ACT6_DROSI7.011e-1795.24Actin, indirect flight muscle OS=Drosophila simula... [more]
ACT6_DROME7.011e-1795.24Actin, indirect flight muscle OS=Drosophila melano... [more]
ACT5_DROME7.011e-1795.24Actin-87E OS=Drosophila melanogaster GN=Act87E PE=... [more]
ACT5_DIPDE7.011e-1795.24Actin-5 (Fragment) OS=Diphyllobothrium dendriticum... [more]
ACT5_BACDO7.011e-1795.24Actin-5, muscle-specific OS=Bactrocera dorsalis PE... [more]
ACT4_DROME7.011e-1795.24Actin, larval muscle OS=Drosophila melanogaster GN... [more]
ACT3_DROME7.011e-1795.24Actin-57B OS=Drosophila melanogaster GN=Act57B PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01I20_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001I20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617684 ID=DN617684; Name=DN617684; organism=Citrus sinensis; type=EST; length=577bp
TATTGAATAACCAAATTTATTGACTGCAAGCTGACACTAATTAAAGTTTT
CTCATACAATAGCTATTAACATTAATGTTCCTTTTGAGAGGGGGAGAAAA
AAAACCTTCAAATATGAAAATTTAGAAAATGAAATAGAAAAGCATCACAA
CCACTCTTCATCTCCAGCTACAAACATCCTACTTTAAAAAAAAAAAAGGA
AAAAAAAGAAAAAAGACTTGGTTGAACACCAGATGAATGCAAGGCAAGGA
AGACGGTTGAGTACAGAAATAAGCCCCCCTCAAACGCTGTAAGAAGCTTG
TATAATAACATCAATATCGAGATATGCCTCCTTCAATGGCCCCAACCTTA
GCACTTCTCCATGTCAACCAACTTGAGTTCGCGAAACGAGACACAAAAAA
CCAACTAAATGGAAAAAAAGAACTCACCCATCAAGCACTTAAAGAACTTA
GAAGCATTTCCTGTGGACAATGGATGGACCAGACTCATCATACTCGCCCT
TTGAGATCCACATCTGCTGGAAGGTGCTGAGGGATGCAAGGATTGATCCT
CCAATCCAAACACTGTATTTTCTCTCT
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