DN617677

Overview
NameDN617677
Unique NameDN617677
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length652
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617677 vs. ExPASy Swiss-Prot
Match: NAT12_ARATH (Nucleobase-ascorbate transporter 12 OS=Arabidopsis thaliana GN=NAT12 PE=1 SV=3)

HSP 1 Score: 144.436 bits (363), Expect = 4.777e-34
Identity = 77/219 (35.16%), Postives = 118/219 (53.88%), Query Frame = 2
Query:   50 GFGLYEFGFPGVAKCVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYN--DAAPKTQAS----------------CRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGIGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFF 652
            G   Y +GFP V KC+EIG+ Q+++++  + YL  +      IF  +AV  S+ I W  A LLT  GAY      P    S                CR D +  + +APW R P+P QWG P F+   AF M + S +A V+S G++ A +   ++ P    V+SR +G +G   +L+GL+GT  G++   EN   +A+T++GSRRVV++ A  ++ F
Sbjct:  319 GLSFYSYGFPLVGKCLEIGVVQILLVIIFALYLRKISVLSHRIFLIYAVPLSLAITWAAAFLLTETGAYTYKGCDPNVPVSNVVSTHCRKYMTRMKYCRVDTSHALSSAPWFRFPYPLQWGVPLFNWKMAFVMCVVSVIASVDSVGSYHASSLLVASRPPTRGVVSRAIGLEGFTSVLAGLWGTGTGSTTLTENVHTIAVTKMGSRRVVELGACVLVIF 537          
BLAST of DN617677 vs. ExPASy Swiss-Prot
Match: NAT11_ARATH (Nucleobase-ascorbate transporter 11 OS=Arabidopsis thaliana GN=NAT11 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.007e-32
Identity = 73/217 (33.64%), Postives = 115/217 (53.00%), Query Frame = 2
Query:   50 GFGLYEFGFPGVAKCVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYN---------------DAAPK---TQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGIGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMI 646
            G   + +GFP    CVEI +P +++++  + YL  V   G  +F  +AV  S +++W YA  LTVGGAY+               D   K   T   CRTD +     A W+R+P+PFQWG P+F    +  M+  S VA V+S G + + +   +A      ++SRG+  +G   LL+G++G+  G++   EN   + +T+V SRR + I A F+I
Sbjct:  324 GLAFFSYGFPQAGTCVEISVPLILLLLIFTLYLRGVSLFGHRLFRIYAVPLSALLIWTYAFFLTVGGAYDYRGCNADIPSSNILIDECKKHVYTMKHCRTDASNAWRTASWVRIPYPFQWGFPNFHMRTSIIMIFVSLVASVDSVGTYHSASMIVNAKRPTRGIVSRGIALEGFCSLLAGIWGSGTGSTTLTENIHTINITKVASRRALVIGAMFLI 540          
BLAST of DN617677 vs. ExPASy Swiss-Prot
Match: S23A2_XENTR (Solute carrier family 23 member 2 OS=Xenopus tropicalis GN=slc23a2 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.713e-29
Identity = 67/196 (34.18%), Postives = 109/196 (55.61%), Query Frame = 2
Query:  101 IGLPQLVIIVFISQY-----LPHVIKRGKN--------IFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTD-RAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGIGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMI 646
            I +  + +++  SQY     LP  I + K         +F  F +I ++++ W+   + TV   +   + K     RTD R G++  APW +VP+PFQWG P+  A     M+ A   +++ES G ++A AR + A P P   ++RG+  +G+  +L G+FGT NG++ S  N G+L +T+V SRRV+Q  A FM+
Sbjct:  270 IAMLTIFLVLLFSQYARNVKLPLPIYKSKKGWTAYKLQLFKMFPIIMAILVSWLLCFIFTVTDVFPPDSSKYGYYARTDARQGVLTVAPWFKVPYPFQWGLPTVSAAGVIGMLSAVVASIIESIGDYYACARLSCAPPPPIHAINRGIFIEGLSCVLDGVFGTGNGSTSSSPNIGVLGITKVASRRVIQYGAAFML 465          
BLAST of DN617677 vs. ExPASy Swiss-Prot
Match: S23A2_HUMAN (Solute carrier family 23 member 2 OS=Homo sapiens GN=SLC23A2 PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.346e-28
Identity = 66/196 (33.67%), Postives = 109/196 (55.61%), Query Frame = 2
Query:  101 IGLPQLVIIVFISQYLPHV--------IKRG-----KNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTD-RAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGIGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMI 646
            I +  + +++  SQY  +V         K+G       +F  F +I ++++ W+   + TV   +   + K     RTD R G++  APW +VP+PFQWG P+  A     M+ A   +++ES G ++A AR + A P P   ++RG+  +G+  +L G+FGT NG++ S  N G+L +T+VGSRRV+Q  A  M+
Sbjct:  272 IAMLTIFLVLLFSQYARNVKFPLPIYKSKKGWTAYKLQLFKMFPIILAILVSWLLCFIFTVTDVFPPDSTKYGFYARTDARQGVLLVAPWFKVPYPFQWGLPTVSAAGVIGMLSAVVASIIESIGDYYACARLSCAPPPPIHAINRGIFVEGLSCVLDGIFGTGNGSTSSSPNIGVLGITKVGSRRVIQCGAALML 467          
BLAST of DN617677 vs. ExPASy Swiss-Prot
Match: S23A1_MOUSE (Solute carrier family 23 member 1 OS=Mus musculus GN=Slc23a1 PE=1 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 1.346e-28
Identity = 72/203 (35.47%), Postives = 110/203 (54.19%), Query Frame = 2
Query:   80 GVAKCVEIGLPQLVIIVFISQYLPH------VIKRGKN-------IFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDA-APWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGIGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMI 646
            G++ C       +++IV  SQYL +      V + GK        IF  F ++ +++ VW+  ++LT+               RTD  G I A +PWIR+P+P QWG P+        M  A+   ++ES G ++A AR A A P P   ++RG+  +GI  +++GL GT NG++ S  N G+L +T+VGSRRVVQ  AG M+
Sbjct:  219 GISAC------SILLIVLFSQYLRNLTFLLPVYRWGKGLTLFRVQIFKMFPIVLAIMTVWLLCYVLTLTDVLPADPTVYGFQARTDARGDIMAISPWIRIPYPCQWGLPTVTVAAVLGMFSATLAGIIESIGDYYACARLAGAPPPPVHAINRGIFTEGICCIIAGLLGTGNGSTSSSPNIGVLGITKVGSRRVVQYGAGIML 415          
BLAST of DN617677 vs. ExPASy Swiss-Prot
Match: S23A1_HUMAN (Solute carrier family 23 member 1 OS=Homo sapiens GN=SLC23A1 PE=1 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 1.346e-28
Identity = 72/203 (35.47%), Postives = 110/203 (54.19%), Query Frame = 2
Query:   80 GVAKCVEIGLPQLVIIVFISQYLPH------VIKRGKN-------IFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDA-APWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGIGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMI 646
            G++ C       +++I+  SQYL +      V + GK        IF  F ++ +++ VW+  ++LT+               RTD  G I A APWIR+P+P QWG P+  A     M  A+   ++ES G ++A AR A A P P   ++RG+  +GI  +++GL GT NG++ S  N G+L +T+VGSRRVVQ  A  M+
Sbjct:  212 GISAC------SILLIILFSQYLRNLTFLLPVYRWGKGLTLLRIQIFKMFPIMLAIMTVWLLCYVLTLTDVLPTDPKAYGFQARTDARGDIMAIAPWIRIPYPCQWGLPTVTAAAVLGMFSATLAGIIESIGDYYACARLAGAPPPPVHAINRGIFTEGICCIIAGLLGTGNGSTSSSPNIGVLGITKVGSRRVVQYGAAIML 408          
BLAST of DN617677 vs. ExPASy Swiss-Prot
Match: S23A1_RAT (Solute carrier family 23 member 1 OS=Rattus norvegicus GN=Slc23a1 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.758e-28
Identity = 71/203 (34.98%), Postives = 110/203 (54.19%), Query Frame = 2
Query:   80 GVAKCVEIGLPQLVIIVFISQYLPH------VIKRGKN-------IFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDA-APWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGIGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMI 646
            G++ C       +++IV  SQYL +      V + GK        IF  F ++ +++ VW+  ++LT+               RTD  G I A +PWIR+P+P QWG P+        M  A+   ++ES G ++A AR A A P P   ++RG+  +G+  +++GL GT NG++ S  N G+L +T+VGSRRVVQ  AG M+
Sbjct:  219 GISAC------SILLIVLFSQYLRNLTFLLPVYRWGKGLTLFRIQIFKMFPIVLAIMTVWLLCYVLTLTDVLPADPTVYGFQARTDARGDIMAISPWIRIPYPCQWGLPTVTVAAVLGMFSATLAGIIESIGDYYACARLAGAPPPPVHAINRGIFTEGVCCIIAGLLGTGNGSTSSSPNIGVLGITKVGSRRVVQYGAGIML 415          
BLAST of DN617677 vs. ExPASy Swiss-Prot
Match: S23A2_MOUSE (Solute carrier family 23 member 2 OS=Mus musculus GN=Slc23a2 PE=1 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 5.116e-28
Identity = 65/196 (33.16%), Postives = 108/196 (55.10%), Query Frame = 2
Query:  101 IGLPQLVIIVFISQYLPHV-----IKRGKN--------IFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTD-RAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGIGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMI 646
            I +  + +++  SQY  +V     I + K         +F  F +I ++++ W+   + TV   +   +       RTD R G++  APW +VP+PFQWG P+  A     M+ A   +++ES G ++A AR + A P P   ++RG+  +G+  +L G+FGT NG++ S  N G+L +T+VGSRRV+Q  A  M+
Sbjct:  270 IAMLTIFLVLLFSQYARNVKFPLPIYKSKKGWTAYKFQLFKMFPIILAILVSWLLCFIFTVTDVFPSNSTDYGYYARTDARKGVLLVAPWFKVPYPFQWGMPTVSAAGVIGMLSAVVASIIESIGDYYACARLSCAPPPPIHAINRGIFVEGLSCVLDGIFGTGNGSTSSSPNIGVLGITKVGSRRVIQYGAALML 465          
BLAST of DN617677 vs. ExPASy Swiss-Prot
Match: S23A2_RAT (Solute carrier family 23 member 2 OS=Rattus norvegicus GN=Slc23a2 PE=2 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 6.681e-28
Identity = 65/196 (33.16%), Postives = 108/196 (55.10%), Query Frame = 2
Query:  101 IGLPQLVIIVFISQYLPHV--------IKRG-----KNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTD-RAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGIGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMI 646
            I +  + +++  SQY  +V         K+G       +F  F +I ++++ W+   + TV   +   +       RTD R G++  APW +VP+PFQWG P+  A     M+ A   +++ES G ++A AR + A P P   ++RG+  +G+  +L G+FGT NG++ S  N G+L +T+VGSRRV+Q  A  M+
Sbjct:  269 IAMLTIFLVLLFSQYARNVKFPLPIYKSKKGWTAYKLQLFKMFPIILAILVSWLLCFIFTVTDVFPSNSTDYGYYARTDARKGVLLVAPWFKVPYPFQWGMPTVSAAGVIGMLSAVVASIIESIGDYYACARLSCAPPPPIHAINRGIFVEGLSCVLDGVFGTGNGSTSSSPNIGVLGITKVGSRRVIQYGAALML 464          
BLAST of DN617677 vs. ExPASy Swiss-Prot
Match: NAT9_ARATH (Putative nucleobase-ascorbate transporter 9 OS=Arabidopsis thaliana GN=NAT9 PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.482e-24
Identity = 73/206 (35.44%), Postives = 94/206 (45.63%), Query Frame = 2
Query:   50 GFGLYEFGFPGVAKCVEIGLPQLVIIVFISQYLPHVIKRGKNIFD-----RFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGIGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFF 652
            G GLY  GFP                         ++K+G  I+D     R+ ++  + +VW++A LLT  G Y+     TQ SCRTDR GLI   P            P+FD  ++FAMM ASFV L ESTG F+A ARY                                      +N GLLA+T+VGSRRV+QISA FM+FF
Sbjct:  193 GLGLYHIGFP-------------------------LVKKGPMIWDGNRCDRYGMMLCIPVVWLFAQLLTSSGVYDHKPQTTQTSCRTDRTGLITNTP-----------CPTFDITDSFAMMAASFVTLFESTGLFYASARYG-------------------------------------KNVGLLAMTKVGSRRVIQISAAFMLFF 325          
The following BLAST results are available for this feature:
BLAST of DN617677 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
NAT12_ARATH4.777e-3435.16Nucleobase-ascorbate transporter 12 OS=Arabidopsis... [more]
NAT11_ARATH2.007e-3233.64Nucleobase-ascorbate transporter 11 OS=Arabidopsis... [more]
S23A2_XENTR2.713e-2934.18Solute carrier family 23 member 2 OS=Xenopus tropi... [more]
S23A2_HUMAN1.346e-2833.67Solute carrier family 23 member 2 OS=Homo sapiens ... [more]
S23A1_MOUSE1.346e-2835.47Solute carrier family 23 member 1 OS=Mus musculus ... [more]
S23A1_HUMAN1.346e-2835.47Solute carrier family 23 member 1 OS=Homo sapiens ... [more]
S23A1_RAT1.758e-2834.98Solute carrier family 23 member 1 OS=Rattus norveg... [more]
S23A2_MOUSE5.116e-2833.16Solute carrier family 23 member 2 OS=Mus musculus ... [more]
S23A2_RAT6.681e-2833.16Solute carrier family 23 member 2 OS=Rattus norveg... [more]
NAT9_ARATH4.482e-2435.44Putative nucleobase-ascorbate transporter 9 OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01I16_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001I16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617677 ID=DN617677; Name=DN617677; organism=Citrus sinensis; type=EST; length=652bp
TACAAGGTTTTTAAGTCCACTCTCAGTGGTTCCTTTGATTTCCCTAGTTG
GTTTTGGGCTGTACGAGTTTGGTTTTCCTGGGGTTGCCAAATGTGTGGAG
ATTGGACTGCCTCAACTCGTCATTATAGTATTTATTTCACAGTATCTGCC
TCATGTGATAAAACGTGGGAAAAATATCTTTGATCGTTTTGCTGTCATAT
TTTCTGTGGTGATTGTGTGGATATATGCTCATCTACTTACTGTGGGTGGG
GCTTATAATGATGCTGCCCCTAAGACACAAGCAAGCTGCCGAACTGATCG
TGCTGGTCTCATTGATGCTGCTCCCTGGATAAGAGTTCCGTGGCCCTTCC
AATGGGGGGCGCCTTCATTTGATGCTGGTGAAGCTTTTGCCATGATGATG
GCCTCCTTTGTTGCTCTTGTTGAGTCAACTGGTGCTTTTTTTGCGGTAGC
ACGGTATGCAAGTGCAACTCCAATGCCACCTTCTGTTCTCAGCCGTGGTG
TGGGTTGGCAGGGAATTGGCATTTTGCTTTCTGGGTTATTTGGAACTGTA
AACGGAACATCGGTGTCTGTAGAGAATGCTGGTCTTTTGGCCTTGACTAG
AGTTGGCAGTCGAAGGGTTGTCCAAATATCTGCTGGATTCATGATATTCT
TC
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