DN617675

Overview
NameDN617675
Unique NameDN617675
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length773
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DN617675_ssr182 microsatellite DN617675_ssr182:182..193. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig10386 contig Csv1_Contig10386:26..795. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617675 vs. ExPASy Swiss-Prot
Match: ANR44_CHICK (Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B OS=Gallus gallus GN=ANKRD44 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.449e-11
Identity = 50/153 (32.68%), Postives = 74/153 (48.37%), Query Frame = 3
Query:  144 DLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDRD--TALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTPLHHAARGEHVDVIRLLLASGASPTKANLYGKT 596
            D   +TP H+     A +  ++    L+  N+S        DR   TALH   L G++  V LLL +GA++ A D+     LH A   G +E+V LLIN  +   C        D +G TPLH AA    +++++ LL  G    + N+YG T
Sbjct:  104 DKNWQTPLHVAAANKALKCAEIIIPMLSSVNVS--------DRGGRTALHHAALNGHVEMVNLLLAKGANINAFDKKDRRALHWAAYMGHLEVVALLINHGAEVTC-------KDKKGYTPLHAAASNGQINIVKHLLNLGVEIDEMNIYGNT 241          
BLAST of DN617675 vs. ExPASy Swiss-Prot
Match: ANKHM_DROME (Ankyrin repeat and KH domain-containing protein mask OS=Drosophila melanogaster GN=mask PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 4.449e-11
Identity = 50/161 (31.06%), Postives = 80/161 (49.69%), Query Frame = 3
Query:  147 LESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVE-------DRDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTPLHHAARGEHVDVIRLLLASGASPTKANLYGKTPSEL 608
            ++  T  HL+   A AQ   +   +LA+   + S+D+ +E       + DTAL L C  G+   V+LL+ RGA++E +D+ G  PL  A   G  ++V +L+  ++  E      +      DTPL  A  G   +V+ LLL+ GA+    N+   TP  L
Sbjct: 2266 IQENTKLHLQPQVATAQQQFLVQNQLAVAT-TVSLDKTIEIDSETESNHDTALTLACAGGHEELVELLINRGANIEHRDKKGFTPLILAATAGHDKVVDILLKHSAELEAQSERTK------DTPLSLACSGGRYEVVELLLSVGANKEHRNVSDYTPLSL 2419          
BLAST of DN617675 vs. ExPASy Swiss-Prot
Match: V246_FOWPV (Putative ankyrin repeat protein FPV246 OS=Fowlpox virus GN=FPV246 PE=4 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.811e-11
Identity = 49/154 (31.82%), Postives = 75/154 (48.70%), Query Frame = 3
Query:  138 NMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDRDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTPLHHAARGEHVDVIRLLLASGASPTKANLYGKTP 599
            + D   ETP H     AA + G V ++  AL +   ++D       T L   C  G     +LL+E+GA     +  G  PLH+A A G +++V LL++     +   +++      G TPL H     H ++++LLL  GA+P   NLYG TP
Sbjct:  284 SFDSFGETPLH-----AATRSGSVETVN-ALISYGSTVDIKDNIGSTPLMHAC--GNKDISKLLIEKGADPNISNIHGYTPLHNAAAYGSVDVVNLLLSYGVSIDAKDKII------GSTPLDHGV--HHPEIVKLLLEKGANPNTINLYGYTP 421          
BLAST of DN617675 vs. ExPASy Swiss-Prot
Match: TNI3K_HUMAN (Serine/threonine-protein kinase TNNI3K OS=Homo sapiens GN=TNNI3K PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 5.811e-11
Identity = 42/113 (37.17%), Postives = 56/113 (49.56%), Query Frame = 3
Query:  276 TALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTPLHHAARGEHVDVIRLLLASG--ASPTKANLYGKTPSEL 608
            T LH+   YG+    +LLL+ GA +    E G  PLH A A GF+ I +LL+   S     K  +   D E   PLH  +R  H D+++ LL S     P   N+YG TP  L
Sbjct:  270 TPLHIAAYYGHEQVTRLLLKFGADVNVSGEVGDRPLHLASAKGFLNIAKLLMEEGS-----KADVNAQDNEDHVPLHFCSRFGHHDIVKYLLQSDLEVQPHVVNIYGDTPLHL 377          
BLAST of DN617675 vs. ExPASy Swiss-Prot
Match: IKBL2_BOVIN (NF-kappa-B inhibitor-like protein 2 OS=Bos taurus GN=NFKBIL2 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.589e-11
Identity = 54/176 (30.68%), Postives = 80/176 (45.45%), Query Frame = 3
Query:   87 EEDDSEEDNALFEEDGVNMDLESE---TPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDRDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTPLHHAARGEHVDVIRLLLASGASPTKANLYGKTPSE 605
            +E+D E+D+AL   +    + E+E   +PP   D      LG     + +  N  G         +T LH  C+ G L  VQ L+ +G  L  +D  G  PLH+AC  G ++IV+ L++  +  +           +G TPLH A    H +V  LL+  GAS T     G  P E
Sbjct:  472 DEEDEEDDDALEATELELSESENEADASPPLEEDEELRGCLGRQRVNKWSRRNDVG---------ETLLHRACIEGQLGRVQDLVRQGHPLNPRDYCGWTPLHEACNYGHLDIVRFLLDHGAAVDDPGGQ----GCDGITPLHDALNCGHFEVAELLIERGASVTLRTRKGHNPLE 634          
BLAST of DN617675 vs. ExPASy Swiss-Prot
Match: ANR44_MOUSE (Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B OS=Mus musculus GN=Ankrd44 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.589e-11
Identity = 51/153 (33.33%), Postives = 73/153 (47.71%), Query Frame = 3
Query:  144 DLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDRD--TALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTPLHHAARGEHVDVIRLLLASGASPTKANLYGKT 596
            D   +TP H+     A +  +V    L+  N+S        DR   TALH   L G++  V LLL +GA++ A D+     LH A   G +++V LLIN  +   C        D +G TPLH AA    + V++ LL  G    + N+YG T
Sbjct:  104 DKNWQTPLHVAAANKAVKCAEVIIPLLSSVNVS--------DRGGRTALHHAALNGHMEMVNLLLAKGANINAFDKKDRRALHWAAYMGHLDVVALLINHGAEVTC-------KDKKGYTPLHAAASNGQISVVKHLLNLGVEIDEINVYGNT 241          
BLAST of DN617675 vs. ExPASy Swiss-Prot
Match: ANR44_HUMAN (Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B OS=Homo sapiens GN=ANKRD44 PE=1 SV=3)

HSP 1 Score: 67.781 bits (164), Expect = 7.589e-11
Identity = 51/153 (33.33%), Postives = 74/153 (48.37%), Query Frame = 3
Query:  144 DLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDRD--TALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTPLHHAARGEHVDVIRLLLASGASPTKANLYGKT 596
            D   +TP H+     A +  +V    L+  N+S        DR   TALH   L G++  V LLL +GA++ A D+     LH A   G +++V LLIN  +   C        D +G TPLH AA    ++V++ LL  G    + N+YG T
Sbjct:  104 DKNWQTPLHVAAANKAVKCAEVIIPLLSSVNVS--------DRGGRTALHHAALNGHVEMVNLLLAKGANINAFDKKDRRALHWAAYMGHLDVVALLINHGAEVTC-------KDKKGYTPLHAAASNGQINVVKHLLNLGVEIDEINVYGNT 241          
The following BLAST results are available for this feature:
BLAST of DN617675 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
ANR44_CHICK4.449e-1132.68Serine/threonine-protein phosphatase 6 regulatory ... [more]
ANKHM_DROME4.449e-1131.06Ankyrin repeat and KH domain-containing protein ma... [more]
V246_FOWPV5.811e-1131.82Putative ankyrin repeat protein FPV246 OS=Fowlpox ... [more]
TNI3K_HUMAN5.811e-1137.17Serine/threonine-protein kinase TNNI3K OS=Homo sap... [more]
IKBL2_BOVIN7.589e-1130.68NF-kappa-B inhibitor-like protein 2 OS=Bos taurus ... [more]
ANR44_MOUSE7.589e-1133.33Serine/threonine-protein phosphatase 6 regulatory ... [more]
ANR44_HUMAN7.589e-1133.33Serine/threonine-protein phosphatase 6 regulatory ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01I15_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001I15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617675 ID=DN617675; Name=DN617675; organism=Citrus sinensis; type=EST; length=773bp
GTTTTCATTCTACTTTTCTCTGCAAAACACCGTTATAAAAAAGTTAATTA
GGAGAAAAAATGGCGGTACCGCGCAACGGAATGATGGAGGAAGATGATAG
CGAAGAAGATAACGCTCTCTTTGAAGAAGACGGCGTTAATATGGACCTCG
AATCGGAAACTCCACCTCACCTCCGTGACCTCGCCGCCGCCGCTCAGCTC
GGCGACGTTCATTCCCTCCGTCTCGCTCTAGATAACTTGAGTGGTAGTAT
TGATGAACCAGTAGAAGACAGGGACACTGCTCTCCATCTGACATGCCTCT
ATGGCTATCTGCCTTGTGTTCAGCTACTCTTGGAACGAGGGGCTAGTTTG
GAGGCCAAGGATGAAGATGGAGCAATTCCTCTGCATGATGCTTGTGCTGG
GGGGTTTATTGAGATAGTTCAACTTCTAATTAATAGTGCTAGCGGCACTG
AATGTGTAAAAAGGATGTTAGAAACTGTTGATGCTGAAGGTGATACTCCT
CTTCATCATGCGGCAAGAGGTGAACACGTGGATGTCATAAGATTGTTGCT
GGCTTCTGGTGCTTCTCCTACAAAGGCAAACCTCTATGGAAAGACCCCAA
GTGAGTTACCCGAGCCAGACACCGAGGCTAGGAGAATTCTAGAAGTTGCT
GCTAGTGGTCAGACCTGCCAGTAATCTCTATCGAAATAGCTGATATTATG
TGAACTTTATTTCTGTTTTGACTGCTCTCGTTACTTTTTTTTTTTTTTCA
TAGATAGGTATGTTTGGAATTCG
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