DN617666

Overview
NameDN617666
Unique NameDN617666
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length665
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9443 contig Csv1_Contig9443:178..842. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617666 vs. ExPASy Swiss-Prot
Match: HEM2_CHLP8 (Delta-aminolevulinic acid dehydratase OS=Chlorobaculum parvum (strain NCIB 8327) GN=hemB PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.519e-22
Identity = 60/144 (41.67%), Postives = 89/144 (61.81%), Query Frame = 1
Query:  235 RKSPAMRASFQETNLSPENFVYPLFIHEGEEDTP-IGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIRLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQA 663
            R++ A+R   QE  L+  + V+PLF+  G      + +MPG +R       V+E  +  D+G+  + LF  +P+  K+  G EAYNDNG++ + IR +K   P+L I TDVALDP++  GHDG+V+ DG+I+NDETV  L K A
Sbjct:   17 RRTAALRNLVQENTLTVNDLVFPLFVMPGTNAVEEVSSMPGSFRFTIDRA-VEECKELYDLGIQGIDLFG-IPEQ-KTEDGSEAYNDNGILQQAIRAIKKAVPELCIMTDVALDPFTPFGHDGLVK-DGIILNDETVEVLQKMA 156          
BLAST of DN617666 vs. ExPASy Swiss-Prot
Match: HEM2_BRAJA (Delta-aminolevulinic acid dehydratase OS=Bradyrhizobium japonicum GN=hemB PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.058e-20
Identity = 55/145 (37.93%), Postives = 85/145 (58.62%), Query Frame = 1
Query:  232 NRKSPAMRASFQETNLSPENFVYPLFIHEGEEDTP-IGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIRLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQA 663
            NRK+   R   +E  L+ ++ ++PLF+ +G      I +MPG  RL      V+E  +A  + +  + LFP    +L+   G EA N N LV + +R +K  +P++ +  DVALDP++S GHDG++  DG I+NDETV  L +QA
Sbjct:   35 NRKAEWARRMVRENVLTTDDLIWPLFLIDGNNKREQIASMPGVERLSVDQA-VREAERAMKLTIPCIALFPYTDPSLRDEEGSEACNPNNLVCQAVRAIKKEFPEIGVLCDVALDPFTSHGHDGLI-ADGAILNDETVAVLVRQA 177          
BLAST of DN617666 vs. ExPASy Swiss-Prot
Match: HEM2_PSEAE (Delta-aminolevulinic acid dehydratase OS=Pseudomonas aeruginosa GN=hemB PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.996e-19
Identity = 53/145 (36.55%), Postives = 85/145 (58.62%), Query Frame = 1
Query:  232 NRKSPAMRASFQETNLSPENFVYPLFIHEG-EEDTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIRLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQA 663
            NR+    R   +E  L+ ++ + P+F+ +G  +   I +MPG  RL     L+ E  +   +G+ ++ LFP  P   KS    EAYN  G+  R  R L++R+P+L I TDVALDP+++ G DGI+ +DG ++ND ++  L +QA
Sbjct:   18 NRRDDFSRRLVRENVLTVDDLILPVFVLDGVNQRESIPSMPGVERLSIDQLLI-EAEEWVALGIPALALFPVTPVEKKSLDAAEAYNPEGIAQRATRALRERFPELGIITDVALDPFTTHGQDGILDDDGYVLNDVSIDVLVRQA 161          
BLAST of DN617666 vs. ExPASy Swiss-Prot
Match: HEM2_BACSU (Delta-aminolevulinic acid dehydratase OS=Bacillus subtilis GN=hemB PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.446e-19
Identity = 54/144 (37.50%), Postives = 88/144 (61.11%), Query Frame = 1
Query:  235 RKSPAMRASFQETNLSPENFVYPLFIHEG-EEDTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIRLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQA 663
            R S AMR   +ET L P +F+YP+F+ EG E    + +MP  + +     L  EVA+   +G+ SV++F  +P+  K   G +AY+D+G+V + I  +K+ +P++V+  D  L  Y+  GH G+V+ DGVI+NDE++  L + A
Sbjct:   12 RTSKAMREMVKETRLHPSDFIYPIFVVEGLEGKKAVPSMPDVHHVSLDL-LKDEVAELVKLGIQSVIVFG-IPEE-KDDCGTQAYHDHGIVQKAITEIKEHFPEMVVVADTCLCEYTDHGHCGLVK-DGVILNDESLELLAQTA 151          
BLAST of DN617666 vs. ExPASy Swiss-Prot
Match: HEM2_SHIFL (Delta-aminolevulinic acid dehydratase OS=Shigella flexneri GN=hemB PE=3 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 7.584e-19
Identity = 55/144 (38.19%), Postives = 84/144 (58.33%), Query Frame = 1
Query:  235 RKSPAMRASFQETNLSPENFVYPLFIHEGEED-TPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIRLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQA 663
            RKSPA+RA F+ET LS  + V P+F+ E  +D   + AMPG  R+  +H L +E+ +  + G+ SV+ F          TG +A+ ++GLV R  R+ K   P++++ +D     Y+S GH G++ E GV  ND T+  L KQA
Sbjct:   12 RKSPALRAMFEETTLSLNDLVLPIFVEEEIDDYKAVEAMPGVMRIPEKH-LAREIERIANAGIRSVMTFGISHHT--DETGSDAWREDGLVARMSRICKQTVPEMIVMSDTCFCEYTSHGHCGVLCEHGV-DNDATLENLGKQA 151          
BLAST of DN617666 vs. ExPASy Swiss-Prot
Match: HEM2_ECOLI (Delta-aminolevulinic acid dehydratase OS=Escherichia coli (strain K12) GN=hemB PE=1 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 7.584e-19
Identity = 55/144 (38.19%), Postives = 84/144 (58.33%), Query Frame = 1
Query:  235 RKSPAMRASFQETNLSPENFVYPLFIHEGEED-TPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIRLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQA 663
            RKSPA+RA F+ET LS  + V P+F+ E  +D   + AMPG  R+  +H L +E+ +  + G+ SV+ F          TG +A+ ++GLV R  R+ K   P++++ +D     Y+S GH G++ E GV  ND T+  L KQA
Sbjct:   12 RKSPALRAMFEETTLSLNDLVLPIFVEEEIDDYKAVEAMPGVMRIPEKH-LAREIERIANAGIRSVMTFGISHHT--DETGSDAWREDGLVARMSRICKQTVPEMIVMSDTCFCEYTSHGHCGVLCEHGV-DNDATLENLGKQA 151          
BLAST of DN617666 vs. ExPASy Swiss-Prot
Match: HEM2_CHLPN (Delta-aminolevulinic acid dehydratase OS=Chlamydia pneumoniae GN=hemB PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 7.584e-19
Identity = 51/139 (36.69%), Postives = 85/139 (61.15%), Query Frame = 1
Query:  232 NRKSPAMRASFQETNLSPENFVYPLFIHEGEE-DTPIGAMPGCYRLGWRHGLV-QEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIRLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETV 642
            NRK+ A+R    ET+LSP++ + P F+  G      I ++PG +R  W   L+ +E+ +    G+ +V+LFP +PD LK   G  + N   ++  +I  +K+ +P L + +D+ALDPY++ GHDGI   +G ++NDE+V
Sbjct:   13 NRKTAAIRDLLAETHLSPKDLIAPFFVKYGNNIKEEIPSLPGVFR--WSLDLLLKEIERLCTYGLRAVMLFPIIPDDLKDAYGSYSSNPKNILCHSIHEIKNAFPHLCLISDIALDPYTTHGHDGIFL-NGEVLNDESV 148          
BLAST of DN617666 vs. ExPASy Swiss-Prot
Match: HEM2_RHOCA (Delta-aminolevulinic acid dehydratase OS=Rhodobacter capsulatus GN=hemB PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.207e-18
Identity = 52/144 (36.11%), Postives = 83/144 (57.64%), Query Frame = 1
Query:  235 RKSPAMRASFQETNLSPENFVYPLFIHEGE-EDTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIRLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQA 663
            R++ A+R   QE  LS ++ ++P+FI +    D  I +MPG  R     G ++    +RD G +  +  P    A+K+ T + A+  +    R I  +K   P++ I TD+ALDPY+++GHDG+VR DG+++NDET   L K A
Sbjct:   17 RRTEALRDLAQENRLSVKDLIWPIFITDVPGADVEISSMPGVVRRTM-DGALKAAEGSRDAGHSRDLPVPLTDPAVKTETCEMAWQPDNFTNRVIAAMKQAVPEVAIMTDIALDPYNANGHDGLVR-DGILLNDETTEALVKMA 158          
BLAST of DN617666 vs. ExPASy Swiss-Prot
Match: HEM2_ARCFU (Delta-aminolevulinic acid dehydratase OS=Archaeoglobus fulgidus GN=hemB PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.882e-18
Identity = 54/139 (38.85%), Postives = 85/139 (61.15%), Query Frame = 1
Query:  250 MRASFQETNLSPENFVYPLFIHEG-EEDTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIRLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQA 663
            +R  F+E  LSPEN + P+F+ E  +E  PI +MP  +R+     + +EV +  +  + S +LF  +P + K  TG  AY+ NG++ + +R +K  +PD VI TDV L  Y++ GH G+V+ DG I+NDET+  + K A
Sbjct:   17 LRWMFREARLSPENLITPIFVDENIKEKKPIESMPDYFRIPLEM-VDKEVEECLEKDLRSFILFG-IP-SYKDETGSSAYDQNGVIQKAVRRIKAEFPDAVIVTDVCLCEYTTHGHCGVVK-DGEIVNDETLPIIGKTA 151          
BLAST of DN617666 vs. ExPASy Swiss-Prot
Match: HEM2_CHLMU (Delta-aminolevulinic acid dehydratase OS=Chlamydia muridarum GN=hemB PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 4.916e-18
Identity = 52/141 (36.88%), Postives = 86/141 (60.99%), Query Frame = 1
Query:  232 NRKSPAMRASFQETNLSPENFVYPLFIHEGE---EDTPIGAMPGCYRLGWRHGLV-QEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIRLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETV 642
            NRKS A+R+  +ETN+   + ++P+F+ EG    E+ P  +MPG YR  W    + +E+ +   +G+ +V+LFP + D  K   G  A +   +V R I+ +K  +P L + +D+ALDP+++ GHDGI   + V +NDE+V
Sbjct:   13 NRKSAAIRSMIRETNMVSSDLIWPIFLKEGSGIREEIP--SMPGVYR--WSLDTISRELERLCLIGLKAVILFPVIEDQKKDQFGAYASHPYNIVCRGIQEIKKSFPQLCVISDIALDPFTTSGHDGIFYNNEV-LNDESV 148          
The following BLAST results are available for this feature:
BLAST of DN617666 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
HEM2_CHLP82.519e-2241.67Delta-aminolevulinic acid dehydratase OS=Chlorobac... [more]
HEM2_BRAJA1.058e-2037.93Delta-aminolevulinic acid dehydratase OS=Bradyrhiz... [more]
HEM2_PSEAE1.996e-1936.55Delta-aminolevulinic acid dehydratase OS=Pseudomon... [more]
HEM2_BACSU4.446e-1937.50Delta-aminolevulinic acid dehydratase OS=Bacillus ... [more]
HEM2_SHIFL7.584e-1938.19Delta-aminolevulinic acid dehydratase OS=Shigella ... [more]
HEM2_ECOLI7.584e-1938.19Delta-aminolevulinic acid dehydratase OS=Escherich... [more]
HEM2_CHLPN7.584e-1936.69Delta-aminolevulinic acid dehydratase OS=Chlamydia... [more]
HEM2_RHOCA2.207e-1836.11Delta-aminolevulinic acid dehydratase OS=Rhodobact... [more]
HEM2_ARCFU2.882e-1838.85Delta-aminolevulinic acid dehydratase OS=Archaeogl... [more]
HEM2_CHLMU4.916e-1836.88Delta-aminolevulinic acid dehydratase OS=Chlamydia... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01I10_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001I10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617666 ID=DN617666; Name=DN617666; organism=Citrus sinensis; type=EST; length=665bp
TTAAGGTTCAATTGCGTCAAAACGAAAACCGTAACGACACGTCGTTTGGT
TGTTACAGCAAGCAAATCGCACGATGGAACGACGAAGAAGCTTGGAATCA
GTGACGCTGAGTGTGAGGCGGCTGTTGTGGCGGGAAATATTCCAGAAGCG
CCTCCCGTGCCACCAAAGCCTGCCGCGCCAGCTGGAACTCCTGTAGTTCC
TTCTCTTCCACTTAGTCGGCGGCCTCGCCGTAATCGGAAGTCCCCCGCAA
TGAGAGCATCCTTCCAGGAAACAAATCTTTCACCGGAAAATTTTGTATAT
CCACTTTTTATTCATGAAGGAGAGGAGGACACGCCTATTGGGGCCATGCC
CGGTTGTTATAGACTTGGTTGGAGACATGGACTTGTTCAAGAGGTGGCGA
AAGCACGGGATGTTGGTGTGAATAGTGTTGTGCTCTTCCCCAAAGTTCCA
GATGCTTTGAAGTCTCCCACAGGAGATGAAGCATACAATGATAATGGTCT
GGTGCCTCGTACAATACGGCTGCTCAAGGATAGATACCCTGATCTTGTAA
TTTACACTGATGTTGCTTTAGATCCATATTCCTCTGATGGGCATGATGGT
ATTGTCAGAGAAGACGGAGTCATTATGAATGATGAAACAGTGCATCAATT
ATGTAAACAAGCTGT
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