DN617666

Overview
NameDN617666
Unique NameDN617666
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length665
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617666 vs. ExPASy Swiss-Prot
Match: HEM2_CHLTR (Delta-aminolevulinic acid dehydratase OS=Chlamydia trachomatis GN=hemB PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 6.420e-18
Identity = 51/139 (36.69%), Postives = 84/139 (60.43%), Query Frame = 1
Query:  232 NRKSPAMRASFQETNLSPENFVYPLFIHEGEE-DTPIGAMPGCYRLGWRHGLV-QEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIRLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETV 642
            NRKS A+R+  QET L   + ++P+F+ +G      I +MPG YR  W   +V +E+ +   +G+ +V+LFP +    K   G  A +   +V + I+ +K  +P+L + +D+ALDP+++ GHDGI   + VI NDE+V
Sbjct:   13 NRKSAAVRSIIQETQLCSSDLIWPIFLKDGSGIREEIKSMPGVYR--WSLDMVSKELERLCTIGLKAVILFPVIDANKKEQFGSYASHPYNIVCKGIQAIKKSFPELCVISDIALDPFTTSGHDGIFHNNYVI-NDESV 148          
BLAST of DN617666 vs. ExPASy Swiss-Prot
Match: HEM2_METTH (Delta-aminolevulinic acid dehydratase OS=Methanobacterium thermoautotrophicum GN=hemB PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.095e-17
Identity = 62/148 (41.89%), Postives = 86/148 (58.11%), Query Frame = 1
Query:  235 RKSPAMRASFQETNLSPENFVYPLFIHE--GEEDT-PIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLF--PKVPDALKSPTGDEAYNDNGLVPRTIRLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQA 663
            RKSP +R   +ET L P + +YP+F+ E  G  D   I  MPG +R       V E ++  D G++SV++F  P   D L S     A++ +G+V RT+R LK+   DLV+ TDV L  Y+S GH GIV  DG I+NDET+  L + A
Sbjct:   16 RKSPQIRNILRETRLHPSDLIYPMFVSEKLGRGDVEAIDTMPGQFRYS-VDDAVSEASRLEDEGLSSVLIFGMPSAKDELAS----AAHDPHGVVQRTVRRLKEE-TDLVVMTDVCLCQYTSHGHCGIV-VDGEIVNDETLEVLSRIA 156          
BLAST of DN617666 vs. ExPASy Swiss-Prot
Match: HEM2_METSC (Delta-aminolevulinic acid dehydratase OS=Methanothermus sociabilis GN=hemB PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.435e-17
Identity = 55/146 (37.67%), Postives = 85/146 (58.22%), Query Frame = 1
Query:  235 RKSPAMRASFQETNLSPENFVYPLFIHEG-EEDTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLF--PKVPDALKSPTGDEAYNDNGLVPRTIRLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQA 663
            RK+  +R+  +ET LS ++ +YP+F+ EG +    I  MPG YR      L+ E  K  + G+ ++++F  PK  D      G  AY+ NG+V ++++LLK+   DLV+ TDV L  Y+  GH GIV+   ++ NDET+  L K A
Sbjct:   12 RKNSKIRSLVKETTLSKDDLIYPVFVKEGIKTKEKIPKMPGQYRYSVDE-LIDEAKKLEEKGLKAILVFGIPKKKDKY----GSSAYDPNGIVQKSVKLLKEE-TDLVVITDVCLCQYTEHGHCGIVKNKKIV-NDETLKYLSKVA 150          
BLAST of DN617666 vs. ExPASy Swiss-Prot
Match: HEM2_PROFF (Delta-aminolevulinic acid dehydratase OS=Propionibacterium freudenreichii subsp. freudenreichii GN=hemB PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.523e-16
Identity = 50/147 (34.01%), Postives = 77/147 (52.38%), Query Frame = 1
Query:  235 RKSPAMRASFQETNLSPENFVYPLFIHEG-EEDTPIGAMPGCYRLGWRH---GLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIRLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQA 663
            R++PA+R    ET L P + V P+F  EG  E   I  MPG     W+H    L + V  A D GV +V+LF    +  + P G +A+N +G++   +R   +  P+L +  DV LD ++  GH G++  DG + ND T+    K +
Sbjct:   17 RRTPAIRRMVAETRLDPADLVLPMFAVEGLTEPREIATMPGV----WQHTKESLQKAVHDAADAGVGAVMLFGTPLE--RDPIGSQAWNPHGILANAVRWAVEAEPELPVIADVCLDEFTDHGHCGVLAPDGTVDNDATLPLYAKMS 157          
BLAST of DN617666 vs. ExPASy Swiss-Prot
Match: HEM2_BACHD (Delta-aminolevulinic acid dehydratase OS=Bacillus halodurans GN=hemB PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.601e-16
Identity = 51/146 (34.93%), Postives = 87/146 (59.59%), Query Frame = 1
Query:  235 RKSPAMRASFQETNLSPENFVYPLFIHEGE---EDTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIRLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQA 663
            R++ A+R   +ET L  ++ +YP+F+ EGE   ++ P  +MP  Y+L     L  EV +   +G+ +++LF  VP A K   G  AY+++G+V + IR +K+ YPDL +  D  L  ++  GH G++ E+G I+ND ++  L + A
Sbjct:   14 RQTAAIRNMVRETKLHIDDLIYPIFVKEGEGVRQEVP--SMPNVYQLSLDQ-LDAEVDEIVSLGIPAIILFG-VP-AEKDAVGSAAYHEHGIVQQAIRQVKESYPDLTVIADTCLCQFTDHGHCGVI-EEGKILNDPSLDLLARTA 153          
BLAST of DN617666 vs. ExPASy Swiss-Prot
Match: HEM2_METJA (Delta-aminolevulinic acid dehydratase OS=Methanocaldococcus jannaschii GN=hemB PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.025e-15
Identity = 57/149 (38.26%), Postives = 84/149 (56.38%), Query Frame = 1
Query:  235 RKSPAMRASFQETNLSPENFVYPLFIHE---GEEDTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLF--PKVPDALKSPTGDEAYNDNGLVPRTIRLLKDRYPD-LVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQA 663
            RK+  +R   +ET L+  + + P+F+ E   G E   I +MP  YR     G ++E  +  D+G+ +V+LF  PK  D + S     AY+ NG+V RTIR +K+   D L++  D  L  Y+S GH GIV+ DG I+ND T+  L K A
Sbjct:   18 RKNQKIRDLVRETILTKNDLIMPIFVDENLKGNEKKEISSMPNQYRFSVE-GAIEEAKEIADLGIPAVILFGIPKHKDEIAS----SAYDKNGVVQRTIRGIKEELGDELLVIADCCLCEYTSHGHCGIVK-DGKILNDATLPILAKIA 160          
BLAST of DN617666 vs. ExPASy Swiss-Prot
Match: HEM2_AQUAE (Delta-aminolevulinic acid dehydratase OS=Aquifex aeolicus GN=hemB PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.895e-15
Identity = 47/145 (32.41%), Postives = 85/145 (58.62%), Query Frame = 1
Query:  235 RKSPAMRASFQETNLSPENFVYPLFIHEGE---EDTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIRLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQ 660
            R++  +R   +ET+L+ ++ +YP+F+  GE   E+ P  +MPG YR      +V  V + RD+G+ +++LF  +P+  K   G + +++ G++ R +R +K   PD+ + TDV    Y++ GH G++  D  + ND T+  L KQ
Sbjct:   15 RRNENIRRLVRETHLTLDDLIYPIFVRWGENVVEEVP--SMPGVYRYSVDK-VVDAVKEVRDLGIPAIILFG-IPEH-KDEVGSDTWSEEGIIQRALRKIKKEVPDIYVITDVCFCEYTTHGHCGVL-HDHDVENDLTLENLKKQ 153          
BLAST of DN617666 vs. ExPASy Swiss-Prot
Match: HEM2_CLOJO (Delta-aminolevulinic acid dehydratase (Fragment) OS=Clostridium josui GN=hemB PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.297e-14
Identity = 53/146 (36.30%), Postives = 81/146 (55.48%), Query Frame = 1
Query:  235 RKSPAMRASFQETNLSPENFVYPLFIHEGEE-DTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLF--PKVPDALKSPTGDEAYNDNGLVPRTIRLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQA 663
            R +  +R + +ET LS ++ ++PLFI EG+     I ++PG Y       + + +  A    V SV+LF  PK  D      G EAYN+NG++ + IR +K RYP + + TD+ +  Y+S GH GI+ E   + ND T+  L K A
Sbjct:    9 RTNEVLRKAVRETRLSTDSLIWPLFIVEGKNIKKEISSLPGQYHFS-PDMVGKAIEAALKADVKSVLLFGLPKHKDE----KGSEAYNENGVLQQGIREIKQRYPQMQVITDICMCEYTSHGHCGIL-EGERVDNDRTLPYLEKIA 148          
BLAST of DN617666 vs. ExPASy Swiss-Prot
Match: HEM2_STRCO (Delta-aminolevulinic acid dehydratase OS=Streptomyces coelicolor GN=hemB PE=3 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 5.625e-14
Identity = 46/145 (31.72%), Postives = 76/145 (52.41%), Query Frame = 1
Query:  235 RKSPAMRASFQETNLSPENFVYPLFIHEG-EEDTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIRLLKDRYPD-LVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQA 663
            R +P MR    ET L P +F+ P F+ EG  E  PI AMPG  +   R  L +  A+A + GV+ ++LF    D  K   G    + +G++   +R ++    D L++ +D+ LD ++  GH G++   G + ND T+ +  + A
Sbjct:   16 RTTPVMRRMVAETRLHPADFILPAFVREGVSEPVPIAAMPGVVQ-HTRDTLKKAAAEAVEAGVSGIMLFGVPEDGKKDAAGTAGTDPDGILQVALRDVRAEVGDELLVMSDLCLDEFTDHGHCGVLDGQGRVDNDATLERYAEMA 159          
BLAST of DN617666 vs. ExPASy Swiss-Prot
Match: HEM2_STAES (Delta-aminolevulinic acid dehydratase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=hemB PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.636e-13
Identity = 46/145 (31.72%), Postives = 81/145 (55.86%), Query Frame = 1
Query:  235 RKSPAMRASFQETNLSPENFVYPLFIHEGEE-DTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIRLLKDRYPDLVIYTDVALDPYSSDGHDGIVRE-DGVIMNDETVHQLCKQA 663
            R S  MR   +ET++  E+ +YP+F+ E ++  + I ++PG Y++     L +E+ +A D+G+ +++ F    D  K   G  AY+ NG+V    R+ K+ Y DL+I  D  L  Y+  GH G++ +    + ND+++  L K A
Sbjct:   10 RSSKTMRDLVRETHVRKEDLIYPIFVVEQDDIKSEIKSLPGIYQISLNL-LHEEIKEAYDLGIRAIMFFGVPND--KDDIGSGAYDHNGVVQEATRISKNLYKDLLIVADTCLCEYTDHGHCGVIDDHTHDVDNDKSLPLLVKTA 151          
The following BLAST results are available for this feature:
BLAST of DN617666 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
HEM2_CHLTR6.420e-1836.69Delta-aminolevulinic acid dehydratase OS=Chlamydia... [more]
HEM2_METTH1.095e-1741.89Delta-aminolevulinic acid dehydratase OS=Methanoba... [more]
HEM2_METSC5.435e-1737.67Delta-aminolevulinic acid dehydratase OS=Methanoth... [more]
HEM2_PROFF3.523e-1634.01Delta-aminolevulinic acid dehydratase OS=Propionib... [more]
HEM2_BACHD4.601e-1634.93Delta-aminolevulinic acid dehydratase OS=Bacillus ... [more]
HEM2_METJA1.025e-1538.26Delta-aminolevulinic acid dehydratase OS=Methanoca... [more]
HEM2_AQUAE3.895e-1532.41Delta-aminolevulinic acid dehydratase OS=Aquifex a... [more]
HEM2_CLOJO3.297e-1436.30Delta-aminolevulinic acid dehydratase (Fragment) O... [more]
HEM2_STRCO5.625e-1431.72Delta-aminolevulinic acid dehydratase OS=Streptomy... [more]
HEM2_STAES1.636e-1331.72Delta-aminolevulinic acid dehydratase OS=Staphyloc... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01I10_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001I10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617666 ID=DN617666; Name=DN617666; organism=Citrus sinensis; type=EST; length=665bp
TTAAGGTTCAATTGCGTCAAAACGAAAACCGTAACGACACGTCGTTTGGT
TGTTACAGCAAGCAAATCGCACGATGGAACGACGAAGAAGCTTGGAATCA
GTGACGCTGAGTGTGAGGCGGCTGTTGTGGCGGGAAATATTCCAGAAGCG
CCTCCCGTGCCACCAAAGCCTGCCGCGCCAGCTGGAACTCCTGTAGTTCC
TTCTCTTCCACTTAGTCGGCGGCCTCGCCGTAATCGGAAGTCCCCCGCAA
TGAGAGCATCCTTCCAGGAAACAAATCTTTCACCGGAAAATTTTGTATAT
CCACTTTTTATTCATGAAGGAGAGGAGGACACGCCTATTGGGGCCATGCC
CGGTTGTTATAGACTTGGTTGGAGACATGGACTTGTTCAAGAGGTGGCGA
AAGCACGGGATGTTGGTGTGAATAGTGTTGTGCTCTTCCCCAAAGTTCCA
GATGCTTTGAAGTCTCCCACAGGAGATGAAGCATACAATGATAATGGTCT
GGTGCCTCGTACAATACGGCTGCTCAAGGATAGATACCCTGATCTTGTAA
TTTACACTGATGTTGCTTTAGATCCATATTCCTCTGATGGGCATGATGGT
ATTGTCAGAGAAGACGGAGTCATTATGAATGATGAAACAGTGCATCAATT
ATGTAAACAAGCTGT
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