DN617666

Overview
NameDN617666
Unique NameDN617666
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length665
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9443 contig Csv1_Contig9443:178..842. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617666 vs. ExPASy Swiss-Prot
Match: HEM2_STAEQ (Delta-aminolevulinic acid dehydratase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=hemB PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.636e-13
Identity = 46/145 (31.72%), Postives = 81/145 (55.86%), Query Frame = 1
Query:  235 RKSPAMRASFQETNLSPENFVYPLFIHEGEE-DTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIRLLKDRYPDLVIYTDVALDPYSSDGHDGIVRE-DGVIMNDETVHQLCKQA 663
            R S  MR   +ET++  E+ +YP+F+ E ++  + I ++PG Y++     L +E+ +A D+G+ +++ F    D  K   G  AY+ NG+V    R+ K+ Y DL+I  D  L  Y+  GH G++ +    + ND+++  L K A
Sbjct:   10 RSSKTMRDLVRETHVRKEDLIYPIFVVEQDDIKSEIKSLPGIYQISLNL-LHEEIKEAYDLGIRAIMFFGVPND--KDDIGSGAYDHNGVVQEATRISKNLYKDLLIVADTCLCEYTDHGHCGVIDDHTHDVDNDKSLPLLVKTA 151          
BLAST of DN617666 vs. ExPASy Swiss-Prot
Match: HEM2_CANGA (Delta-aminolevulinic acid dehydratase OS=Candida glabrata GN=HEM2 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.137e-13
Identity = 48/142 (33.80%), Postives = 74/142 (52.11%), Query Frame = 1
Query:  244 PAMRASFQETNLSPENFVYPLFIHE-GEEDTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFP-KVPDALKSPTGDEAYNDNGLVPRTIRLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQA 663
            P +R    E  L     ++PLFI +  +E TPI ++P   R G    LV  V    + G+ SV+LF   + +  K P G  A +  G V + I+LL+  +P+L I  DV L  Y+S GH G++ +DG I  + +V ++   A
Sbjct:   25 PLLREWQSERQLKKNMLIFPLFISDIPDEATPIDSLPNIKRFGINK-LVDYVKPLVEKGLRSVILFGVPLKEGTKDPVGTAADDPEGPVIQAIKLLRKEFPELYIICDVCLCEYTSHGHCGVLYDDGTINRERSVSRIAAVA 165          
BLAST of DN617666 vs. ExPASy Swiss-Prot
Match: HEM2_SYNE7 (Delta-aminolevulinic acid dehydratase OS=Synechococcus elongatus (strain PCC 7942) GN=hemB PE=3 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 2.791e-13
Identity = 48/147 (32.65%), Postives = 77/147 (52.38%), Query Frame = 1
Query:  235 RKSPAMRASFQETNLSPENFVYPLFIHEGEEDTP-IGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIRLLKDRYPDLVIYTDVALDPYSSDGHDGIVRE---DGVIMNDETVHQLCKQA 663
            R S  +R   +ET L+  +F+YPLF   GE     + +MPG Y+L     +V+E  +  D+G+ S++LF    D     TG  A++D G+V +    +K+  P+L++  D  L  Y+  GH G +      G ++ND T+  L K A
Sbjct:   11 RSSETLRRMVRETTLTSADFIYPLFAVPGEGVAKEVTSMPGVYQLSIDK-IVEEAKEVYDLGIPSIILFGIPTDKDNDATG--AWHDCGIVQKAATAVKEAVPELIVAADTCLCEYTPHGHCGYLEVGDLSGRVLNDPTLELLRKTA 154          
BLAST of DN617666 vs. ExPASy Swiss-Prot
Match: HEM2_HELPY (Delta-aminolevulinic acid dehydratase OS=Helicobacter pylori GN=hemB PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.791e-13
Identity = 48/143 (33.57%), Postives = 80/143 (55.94%), Query Frame = 1
Query:  235 RKSPAMRASFQETNLSPENFVYPLFIHEGEE--DTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLF--PKVPDALKSPTGDEAYNDNGLVPRTIRLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQL 651
            R S  +RA  +ET L+ ++F+ PLF+ E +      I +MPG Y++     L++E  +   +GV +V+LF  PK  DA    TG  A N + +V +  + +K R+ DL++  D+    Y+  GH GI+ E+  + ND+T+  L
Sbjct:    9 RSSENLRAMLRETRLNIDDFIAPLFVIESDSCIKNEISSMPGVYQMSMEP-LLKECEELVGLGVKAVLLFGIPKHKDA----TGSHALNKDHIVAKAAKEIKKRFKDLIVIADLCFCEYTDHGHCGIL-ENASVSNDKTLEIL 145          
BLAST of DN617666 vs. ExPASy Swiss-Prot
Match: HEM2_HELPJ (Delta-aminolevulinic acid dehydratase OS=Helicobacter pylori J99 GN=hemB PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.122e-13
Identity = 47/140 (33.57%), Postives = 78/140 (55.71%), Query Frame = 1
Query:  235 RKSPAMRASFQETNLSPENFVYPLFIHEGEED--TPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLF--PKVPDALKSPTGDEAYNDNGLVPRTIRLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETV 642
            R S  +RA  +ET L+  +F+ PLF+ E +      I +MPG Y++     L++E  +   +G+ +V+LF  PK  DA    TG  A N + +V +  R +K R+ DL++  D+    Y+  GH GI+ E+  + ND+T+
Sbjct:    9 RSSENLRAMVRETRLNINDFIAPLFVIESDSGIKNEISSMPGVYQMSIEP-LLKECEELVGLGIKAVLLFGIPKHKDA----TGSHALNKDHIVAKATREIKKRFKDLIVIADLCFCEYTDHGHCGIL-ENASVSNDKTL 142          
BLAST of DN617666 vs. ExPASy Swiss-Prot
Match: HEM2_MYCLE (Delta-aminolevulinic acid dehydratase OS=Mycobacterium leprae GN=hemB PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.363e-12
Identity = 47/138 (34.06%), Postives = 70/138 (50.72%), Query Frame = 1
Query:  235 RKSPAMRASFQETNLSPENFVYPLFIHEG-EEDTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIR-LLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETV 642
            R +PAMR    +T+L P N V P+F+ +G +E  PI +MPG  +   R  L +    A D GV  + LF    D  K  TG    + +G++   +R L +D     V+  D  LD ++  GH G++   G + ND TV
Sbjct:   15 RSTPAMRRLVAQTSLEPRNLVLPMFVADGIDELRPIASMPGVVQ-HTRDSLRRAAVAAVDAGVGGLNLFGVPRDQDKDATGSAGVDPDGILNVALRDLAEDLGDATVLMADTCLDEFTDHGHCGVLDGQGRVDNDATV 151          
BLAST of DN617666 vs. ExPASy Swiss-Prot
Match: HEM2_SYNY3 (Delta-aminolevulinic acid dehydratase OS=Synechocystis sp. (strain PCC 6803) GN=hemB PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.264e-12
Identity = 46/147 (31.29%), Postives = 75/147 (51.02%), Query Frame = 1
Query:  235 RKSPAMRASFQETNLSPENFVYPLFIHEGEEDTP-IGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIRLLKDRYPDLVIYTDVALDPYSSDGHDGIVRE---DGVIMNDETVHQLCKQA 663
            R++  +R   +E  L+  + +YPLF   G      + +MPG Y+L     +V E  + RD+G+ +++LF    D     TG  A++D G+V +    +K   PDLV+  D  L  Y++ GH G +      G ++ND T+  L K A
Sbjct:   11 RQTDVLRRMVRENTLTVNDLIYPLFAVPGNAIAKEVVSMPGVYQLSVDK-IVDEAKEVRDLGIPAIILFGIPEDKDTDATG--AWHDCGIVQKATEAVKKAVPDLVVIVDTCLCEYTNHGHCGYLETGDLTGRVLNDPTLELLKKTA 154          
BLAST of DN617666 vs. ExPASy Swiss-Prot
Match: HEM2_YEAST (Delta-aminolevulinic acid dehydratase OS=Saccharomyces cerevisiae GN=HEM2 PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.173e-11
Identity = 49/146 (33.56%), Postives = 77/146 (52.74%), Query Frame = 1
Query:  244 PAMRASFQETNLSPENFVYPLFIHEGEED-TPIGAMPGCYRLG---WRHGLVQEVAKARDVGVNSVVLF--PKVPDALKSPTGDEAYNDNGLVPRTIRLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQA 663
            P +R    E  L+    ++PLFI +  +D T I ++P   R+G    +  L   VAK    G+ SV+LF  P +P   K P G  A +  G V + I+ +++ +P+L I  DV L  Y+S GH G++ +DG I  + +V +L   A
Sbjct:   25 PLLRQWQSERQLTKNMLIFPLFISDNPDDFTEIDSLPNINRIGVNRLKDYLKPLVAK----GLRSVILFGVPLIPGT-KDPVGTAADDPAGPVIQGIKFIREYFPELYIICDVCLCEYTSHGHCGVLYDDGTINRERSVSRLAAVA 165          
BLAST of DN617666 vs. ExPASy Swiss-Prot
Match: HEM2_BOVIN (Delta-aminolevulinic acid dehydratase OS=Bos taurus GN=ALAD PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.173e-11
Identity = 42/133 (31.58%), Postives = 72/133 (54.14%), Query Frame = 1
Query:  271 TNLSPENFVYPLFIHEGEEDT-PIGAMPGCYRLGWRHGLVQEVAKAR-DVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIRLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQA 663
            T+LS  N +YP+F+ +  +D  PI ++PG  R G     ++E+ K   + G+  V++F       K   G  A +++      IRLL+  +P L++  DV L PY+S GH G++ E+G    +E+  +L + A
Sbjct:   24 TSLSASNLIYPIFVTDVPDDKQPIASLPGVARYGVNR--LEEMLKPLVEEGLRCVLIFGVPSRVPKDERGSAADSEDSPAIEAIRLLRKNFPSLLVACDVCLCPYTSHGHCGLLSENGSFQAEESRQRLAEVA 154          
BLAST of DN617666 vs. ExPASy Swiss-Prot
Match: HEM2_STAAW (Delta-aminolevulinic acid dehydratase OS=Staphylococcus aureus (strain MW2) GN=hemB PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.532e-11
Identity = 44/145 (30.34%), Postives = 80/145 (55.17%), Query Frame = 1
Query:  235 RKSPAMRASFQETNLSPENFVYPLFIHEGEE-DTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIRLLKDRYPDLVIYTDVALDPYSSDGHDGIVRE-DGVIMNDETVHQLCKQA 663
            R S  MR   +E ++  E+ +YP+F+ E ++    I ++PG Y++     L  E+ +A D+G+ +++ F  VP++ K   G  AY  +G++ +  R+ K  Y DL+I  D  L  Y+  GH G++ +    + ND+++  L K A
Sbjct:   10 RSSATMRDMVRENHVRKEDLIYPIFVVEKDDVKKEIKSLPGVYQISLNL-LESELKEAYDLGIRAIMFFG-VPNS-KDDIGTGAYIHDGVIQQATRIAKKMYDDLLIVADTCLCEYTDHGHCGVIDDHTHDVDNDKSLPLLVKTA 151          
The following BLAST results are available for this feature:
BLAST of DN617666 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
HEM2_STAEQ1.636e-1331.72Delta-aminolevulinic acid dehydratase OS=Staphyloc... [more]
HEM2_CANGA2.137e-1333.80Delta-aminolevulinic acid dehydratase OS=Candida g... [more]
HEM2_SYNE72.791e-1332.65Delta-aminolevulinic acid dehydratase OS=Synechoco... [more]
HEM2_HELPY2.791e-1333.57Delta-aminolevulinic acid dehydratase OS=Helicobac... [more]
HEM2_HELPJ8.122e-1333.57Delta-aminolevulinic acid dehydratase OS=Helicobac... [more]
HEM2_MYCLE2.363e-1234.06Delta-aminolevulinic acid dehydratase OS=Mycobacte... [more]
HEM2_SYNY35.264e-1231.29Delta-aminolevulinic acid dehydratase OS=Synechocy... [more]
HEM2_YEAST1.173e-1133.56Delta-aminolevulinic acid dehydratase OS=Saccharom... [more]
HEM2_BOVIN1.173e-1131.58Delta-aminolevulinic acid dehydratase OS=Bos tauru... [more]
HEM2_STAAW1.532e-1130.34Delta-aminolevulinic acid dehydratase OS=Staphyloc... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01I10_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001I10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617666 ID=DN617666; Name=DN617666; organism=Citrus sinensis; type=EST; length=665bp
TTAAGGTTCAATTGCGTCAAAACGAAAACCGTAACGACACGTCGTTTGGT
TGTTACAGCAAGCAAATCGCACGATGGAACGACGAAGAAGCTTGGAATCA
GTGACGCTGAGTGTGAGGCGGCTGTTGTGGCGGGAAATATTCCAGAAGCG
CCTCCCGTGCCACCAAAGCCTGCCGCGCCAGCTGGAACTCCTGTAGTTCC
TTCTCTTCCACTTAGTCGGCGGCCTCGCCGTAATCGGAAGTCCCCCGCAA
TGAGAGCATCCTTCCAGGAAACAAATCTTTCACCGGAAAATTTTGTATAT
CCACTTTTTATTCATGAAGGAGAGGAGGACACGCCTATTGGGGCCATGCC
CGGTTGTTATAGACTTGGTTGGAGACATGGACTTGTTCAAGAGGTGGCGA
AAGCACGGGATGTTGGTGTGAATAGTGTTGTGCTCTTCCCCAAAGTTCCA
GATGCTTTGAAGTCTCCCACAGGAGATGAAGCATACAATGATAATGGTCT
GGTGCCTCGTACAATACGGCTGCTCAAGGATAGATACCCTGATCTTGTAA
TTTACACTGATGTTGCTTTAGATCCATATTCCTCTGATGGGCATGATGGT
ATTGTCAGAGAAGACGGAGTCATTATGAATGATGAAACAGTGCATCAATT
ATGTAAACAAGCTGT
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