DN617666

Overview
NameDN617666
Unique NameDN617666
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length665
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9443 contig Csv1_Contig9443:178..842. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617666 vs. ExPASy Swiss-Prot
Match: HEM2_STAAU (Delta-aminolevulinic acid dehydratase OS=Staphylococcus aureus GN=hemB PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.532e-11
Identity = 44/145 (30.34%), Postives = 80/145 (55.17%), Query Frame = 1
Query:  235 RKSPAMRASFQETNLSPENFVYPLFIHEGEE-DTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIRLLKDRYPDLVIYTDVALDPYSSDGHDGIVRE-DGVIMNDETVHQLCKQA 663
            R S  MR   +E ++  E+ +YP+F+ E ++    I ++PG Y++     L  E+ +A D+G+ +++ F  VP++ K   G  AY  +G++ +  R+ K  Y DL+I  D  L  Y+  GH G++ +    + ND+++  L K A
Sbjct:   10 RSSATMRDMVRENHVRKEDLIYPIFVVEKDDVKKEIKSLPGVYQISLNL-LESELKEAYDLGIRAIMFFG-VPNS-KDDIGTGAYIHDGVIQQATRIAKKMYDDLLIVADTCLCEYTDHGHCGVIDDHTHDVDNDKSLPLLVKTA 151          
BLAST of DN617666 vs. ExPASy Swiss-Prot
Match: HEM2_STAAS (Delta-aminolevulinic acid dehydratase OS=Staphylococcus aureus (strain MSSA476) GN=hemB PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.532e-11
Identity = 44/145 (30.34%), Postives = 80/145 (55.17%), Query Frame = 1
Query:  235 RKSPAMRASFQETNLSPENFVYPLFIHEGEE-DTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIRLLKDRYPDLVIYTDVALDPYSSDGHDGIVRE-DGVIMNDETVHQLCKQA 663
            R S  MR   +E ++  E+ +YP+F+ E ++    I ++PG Y++     L  E+ +A D+G+ +++ F  VP++ K   G  AY  +G++ +  R+ K  Y DL+I  D  L  Y+  GH G++ +    + ND+++  L K A
Sbjct:   10 RSSATMRDMVRENHVRKEDLIYPIFVVEKDDVKKEIKSLPGVYQISLNL-LESELKEAYDLGIRAIMFFG-VPNS-KDDIGTGAYIHDGVIQQATRIAKKMYDDLLIVADTCLCEYTDHGHCGVIDDHTHDVDNDKSLPLLVKTA 151          
BLAST of DN617666 vs. ExPASy Swiss-Prot
Match: HEM2_STAAR (Delta-aminolevulinic acid dehydratase OS=Staphylococcus aureus (strain MRSA252) GN=hemB PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.532e-11
Identity = 44/145 (30.34%), Postives = 80/145 (55.17%), Query Frame = 1
Query:  235 RKSPAMRASFQETNLSPENFVYPLFIHEGEE-DTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIRLLKDRYPDLVIYTDVALDPYSSDGHDGIVRE-DGVIMNDETVHQLCKQA 663
            R S  MR   +E ++  E+ +YP+F+ E ++    I ++PG Y++     L  E+ +A D+G+ +++ F  VP++ K   G  AY  +G++ +  R+ K  Y DL+I  D  L  Y+  GH G++ +    + ND+++  L K A
Sbjct:   10 RSSATMRDMVRENHVRKEDLIYPIFVVEKDDVKKEIKSLPGVYQISLNL-LESELKEAYDLGIRAIMFFG-VPNS-KDDIGTGAYIHDGVIQQATRIAKKMYDDLLIVADTCLCEYTDHGHCGVIDDHTHDVDNDKSLPLLVKTA 151          
BLAST of DN617666 vs. ExPASy Swiss-Prot
Match: HEM2_STAAN (Delta-aminolevulinic acid dehydratase OS=Staphylococcus aureus (strain N315) GN=hemB PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.532e-11
Identity = 44/145 (30.34%), Postives = 80/145 (55.17%), Query Frame = 1
Query:  235 RKSPAMRASFQETNLSPENFVYPLFIHEGEE-DTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIRLLKDRYPDLVIYTDVALDPYSSDGHDGIVRE-DGVIMNDETVHQLCKQA 663
            R S  MR   +E ++  E+ +YP+F+ E ++    I ++PG Y++     L  E+ +A D+G+ +++ F  VP++ K   G  AY  +G++ +  R+ K  Y DL+I  D  L  Y+  GH G++ +    + ND+++  L K A
Sbjct:   10 RSSATMRDMVRENHVRKEDLIYPIFVVEKDDVKKEIKSLPGVYQISLNL-LESELKEAYDLGIRAIMFFG-VPNS-KDDIGTGAYIHDGVIQQATRIAKKMYDDLLIVADTCLCEYTDHGHCGVIDDHTHDVDNDKSLPLLVKTA 151          
BLAST of DN617666 vs. ExPASy Swiss-Prot
Match: HEM2_STAAM (Delta-aminolevulinic acid dehydratase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=hemB PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.532e-11
Identity = 44/145 (30.34%), Postives = 80/145 (55.17%), Query Frame = 1
Query:  235 RKSPAMRASFQETNLSPENFVYPLFIHEGEE-DTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIRLLKDRYPDLVIYTDVALDPYSSDGHDGIVRE-DGVIMNDETVHQLCKQA 663
            R S  MR   +E ++  E+ +YP+F+ E ++    I ++PG Y++     L  E+ +A D+G+ +++ F  VP++ K   G  AY  +G++ +  R+ K  Y DL+I  D  L  Y+  GH G++ +    + ND+++  L K A
Sbjct:   10 RSSATMRDMVRENHVRKEDLIYPIFVVEKDDVKKEIKSLPGVYQISLNL-LESELKEAYDLGIRAIMFFG-VPNS-KDDIGTGAYIHDGVIQQATRIAKKMYDDLLIVADTCLCEYTDHGHCGVIDDHTHDVDNDKSLPLLVKTA 151          
BLAST of DN617666 vs. ExPASy Swiss-Prot
Match: HEM2_STAAC (Delta-aminolevulinic acid dehydratase OS=Staphylococcus aureus (strain COL) GN=hemB PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.532e-11
Identity = 44/145 (30.34%), Postives = 80/145 (55.17%), Query Frame = 1
Query:  235 RKSPAMRASFQETNLSPENFVYPLFIHEGEE-DTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIRLLKDRYPDLVIYTDVALDPYSSDGHDGIVRE-DGVIMNDETVHQLCKQA 663
            R S  MR   +E ++  E+ +YP+F+ E ++    I ++PG Y++     L  E+ +A D+G+ +++ F  VP++ K   G  AY  +G++ +  R+ K  Y DL+I  D  L  Y+  GH G++ +    + ND+++  L K A
Sbjct:   10 RSSATMRDMVRENHVRKEDLIYPIFVVEKDDVKKEIKSLPGVYQISLNL-LESELKEAYDLGIRAIMFFG-VPNS-KDDIGTGAYIHDGVIQQATRIAKKMYDDLLIVADTCLCEYTDHGHCGVIDDHTHDVDNDKSLPLLVKTA 151          
BLAST of DN617666 vs. ExPASy Swiss-Prot
Match: HEM2_STAA8 (Delta-aminolevulinic acid dehydratase OS=Staphylococcus aureus (strain NCTC 8325) GN=hemB PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.532e-11
Identity = 44/145 (30.34%), Postives = 80/145 (55.17%), Query Frame = 1
Query:  235 RKSPAMRASFQETNLSPENFVYPLFIHEGEE-DTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIRLLKDRYPDLVIYTDVALDPYSSDGHDGIVRE-DGVIMNDETVHQLCKQA 663
            R S  MR   +E ++  E+ +YP+F+ E ++    I ++PG Y++     L  E+ +A D+G+ +++ F  VP++ K   G  AY  +G++ +  R+ K  Y DL+I  D  L  Y+  GH G++ +    + ND+++  L K A
Sbjct:   10 RSSATMRDMVRENHVRKEDLIYPIFVVEKDDVKKEIKSLPGVYQISLNL-LESELKEAYDLGIRAIMFFG-VPNS-KDDIGTGAYIHDGVIQQATRIAKKMYDDLLIVADTCLCEYTDHGHCGVIDDHTHDVDNDKSLPLLVKTA 151          
BLAST of DN617666 vs. ExPASy Swiss-Prot
Match: HEM2_ASHGO (Delta-aminolevulinic acid dehydratase OS=Ashbya gossypii GN=HEM2 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.532e-11
Identity = 47/143 (32.87%), Postives = 76/143 (53.15%), Query Frame = 1
Query:  244 PAMRASFQETNLSPENFVYPLFIHE-GEEDTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLF--PKVPDALKSPTGDEAYNDNGLVPRTIRLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQA 663
            P +R    E  L+   F++PLF+ +  +ED PI ++P   R G    L   +      G+ +V+LF  P  P++ K   G  A +  G V + I+LL+  +P+L I  DV L  Y+S GH G++ +DG I  +++V +L   A
Sbjct:   26 PLLREWQNERQLAKNMFIFPLFVSDMPDEDQPIESLPNIRRFGVNK-LAGYLKPLVAKGLRAVLLFGVPMKPNS-KDEFGSAADDPEGPVIQAIKLLRAEFPELYILCDVCLCEYTSHGHCGVLYDDGSINREQSVRRLAAVA 166          
BLAST of DN617666 vs. ExPASy Swiss-Prot
Match: HEM2_MOUSE (Delta-aminolevulinic acid dehydratase OS=Mus musculus GN=Alad PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.613e-11
Identity = 38/132 (28.79%), Postives = 70/132 (53.03%), Query Frame = 1
Query:  271 TNLSPENFVYPLFIHEGEEDT-PIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIRLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQA 663
            + +S  N +YP+F+ +  +D  PI ++PG  R G    L + +    + G+  V++F       K   G  A +++      +RLL+  +P L++  DV L PY+S GH G++ E+G  + +E+  +L + A
Sbjct:   24 STVSASNLIYPIFVTDVPDDVQPIASLPGVARYGVNQ-LEEMLRPLVEAGLRCVLIFGVPSRVPKDEQGSAADSEDSPTIEAVRLLRKTFPSLLVACDVCLCPYTSHGHCGLLSENGAFLAEESRQRLAEVA 154          
BLAST of DN617666 vs. ExPASy Swiss-Prot
Match: HEM2_RAT (Delta-aminolevulinic acid dehydratase OS=Rattus norvegicus GN=Alad PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.412e-11
Identity = 43/143 (30.07%), Postives = 76/143 (53.15%), Query Frame = 1
Query:  244 PAMRASFQET--NLSPENFVYPLFIHEGEEDT-PIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIRLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQA 663
            P +RA +Q T   +S  N +YP+F+ +  +D  PI ++PG  R G    L + +    + G+  V++F       K   G  A +++      +RLL+  +P L++  DV L PY+S GH G++ E+G  + +E+  +L + A
Sbjct:   14 PLLRA-WQTTPSTVSATNLIYPIFVTDVPDDVQPIASLPGVARYGVNQ-LEEMLRPLVEAGLRCVLIFGVPSRVPKDEQGSAADSEDSPTIEAVRLLRKTFPTLLVACDVCLCPYTSHGHCGLLSENGAFLAEESRQRLAEVA 154          
The following BLAST results are available for this feature:
BLAST of DN617666 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
HEM2_STAAU1.532e-1130.34Delta-aminolevulinic acid dehydratase OS=Staphyloc... [more]
HEM2_STAAS1.532e-1130.34Delta-aminolevulinic acid dehydratase OS=Staphyloc... [more]
HEM2_STAAR1.532e-1130.34Delta-aminolevulinic acid dehydratase OS=Staphyloc... [more]
HEM2_STAAN1.532e-1130.34Delta-aminolevulinic acid dehydratase OS=Staphyloc... [more]
HEM2_STAAM1.532e-1130.34Delta-aminolevulinic acid dehydratase OS=Staphyloc... [more]
HEM2_STAAC1.532e-1130.34Delta-aminolevulinic acid dehydratase OS=Staphyloc... [more]
HEM2_STAA81.532e-1130.34Delta-aminolevulinic acid dehydratase OS=Staphyloc... [more]
HEM2_ASHGO1.532e-1132.87Delta-aminolevulinic acid dehydratase OS=Ashbya go... [more]
HEM2_MOUSE2.613e-1128.79Delta-aminolevulinic acid dehydratase OS=Mus muscu... [more]
HEM2_RAT3.412e-1130.07Delta-aminolevulinic acid dehydratase OS=Rattus no... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01I10_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001I10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617666 ID=DN617666; Name=DN617666; organism=Citrus sinensis; type=EST; length=665bp
TTAAGGTTCAATTGCGTCAAAACGAAAACCGTAACGACACGTCGTTTGGT
TGTTACAGCAAGCAAATCGCACGATGGAACGACGAAGAAGCTTGGAATCA
GTGACGCTGAGTGTGAGGCGGCTGTTGTGGCGGGAAATATTCCAGAAGCG
CCTCCCGTGCCACCAAAGCCTGCCGCGCCAGCTGGAACTCCTGTAGTTCC
TTCTCTTCCACTTAGTCGGCGGCCTCGCCGTAATCGGAAGTCCCCCGCAA
TGAGAGCATCCTTCCAGGAAACAAATCTTTCACCGGAAAATTTTGTATAT
CCACTTTTTATTCATGAAGGAGAGGAGGACACGCCTATTGGGGCCATGCC
CGGTTGTTATAGACTTGGTTGGAGACATGGACTTGTTCAAGAGGTGGCGA
AAGCACGGGATGTTGGTGTGAATAGTGTTGTGCTCTTCCCCAAAGTTCCA
GATGCTTTGAAGTCTCCCACAGGAGATGAAGCATACAATGATAATGGTCT
GGTGCCTCGTACAATACGGCTGCTCAAGGATAGATACCCTGATCTTGTAA
TTTACACTGATGTTGCTTTAGATCCATATTCCTCTGATGGGCATGATGGT
ATTGTCAGAGAAGACGGAGTCATTATGAATGATGAAACAGTGCATCAATT
ATGTAAACAAGCTGT
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