DN617665

Overview
NameDN617665
Unique NameDN617665
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length646
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617665 vs. ExPASy Swiss-Prot
Match: HEM2_CHLTE (Delta-aminolevulinic acid dehydratase OS=Chlorobium tepidum GN=hemB PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 7.392e-40
Identity = 81/140 (57.86%), Postives = 106/140 (75.71%), Query Frame = -3
Query:  213 VSIMSYTAKYASSFYGPFREALESNPRFGDKKTYVIRVIELYANYREALVEAQADESEGADILLVKPGLPYLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIILTYFALQAARCL 632
            V I+SY AKYASSFYGPFR+AL S P+FGDK TY +      AN  EA+ E + D  EGADI++VKPGL YLD++   ++++ +P+A Y VSGEY+M+KA  A   IDE+RVMMESL+C++RAGADII TY+A +AA+ L
Sbjct:  192 VGILSYAAKYASSFYGPFRDALHSAPQFGDKSTYQMNP----ANTDEAMKEVELDIIEGADIVMVKPGLAYLDIVWRTKERFDVPVAIYHVSGEYAMVKAAAANGWIDEERVMMESLLCMKRAGADIIFTYYAKEAAKKL 327          
BLAST of DN617665 vs. ExPASy Swiss-Prot
Match: HEM2_AQUAE (Delta-aminolevulinic acid dehydratase OS=Aquifex aeolicus GN=hemB PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.151e-39
Identity = 79/144 (54.86%), Postives = 108/144 (75.00%), Query Frame = -3
Query:  213 GFQHVSIMSYTAKYASSFYGPFREALESNPRFGDKKTYVIRVIELYANYREALVEAQADESEGADILLVKPGLPYLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIILTYFALQAARCL 644
            GF+H+ IM+Y+AK+AS++YGPFREA ES P FGD++TY +      AN REAL E   D  EGAD+++VKP L YLD+I  +++   +P+ AY VSGEYS+IKA G L  IDE++VM E+L+ ++RAGAD+I+TYFA  AAR +
Sbjct:  186 GFKHIPIMAYSAKFASAYYGPFREAAESAPAFGDRRTYQMDP----ANSREALKEVLMDVEEGADVVMVKPALAYLDIIAKVKENVLVPVCAYNVSGEYSLIKAAGKLGWIDEKKVMWETLLSIKRAGADMIITYFAKDAARMI 325          
BLAST of DN617665 vs. ExPASy Swiss-Prot
Match: HEM2_BACHD (Delta-aminolevulinic acid dehydratase OS=Bacillus halodurans GN=hemB PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.180e-37
Identity = 82/148 (55.41%), Postives = 104/148 (70.27%), Query Frame = -3
Query:  201 GFQHVSIMSYTAKYASSFYGPFREALESNPRFGDKKTYVIRVIELYANYREALVEAQADESEGADILLVKPGLPYLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIILTYFALQAARCLCGEK 644
            GF  V +MSY  KYAS+FYGPFR+A  S+P FGD+KTY +      AN  EAL EA++D  EGAD L+VKP L YLD+IR ++++  LP+ AY VSGEYSMIKA      IDE+  ++E L+ ++RAGAD+ILTYFA   AR L  EK
Sbjct:  185 GFTDVPVMSYAVKYASAFYGPFRDAAHSSPVFGDRKTYQMDP----ANRLEALREARSDVEEGADFLIVKPALSYLDIIREVKNETGLPVVAYNVSGEYSMIKAASLQGWIDEKSTVLEKLISMKRAGADLILTYFAKDVARWLNEEK 328          
BLAST of DN617665 vs. ExPASy Swiss-Prot
Match: HEM2_METJA (Delta-aminolevulinic acid dehydratase OS=Methanocaldococcus jannaschii GN=hemB PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.541e-37
Identity = 75/141 (53.19%), Postives = 104/141 (73.76%), Query Frame = -3
Query:  222 GFQHVSIMSYTAKYASSFYGPFREALESNPRFGDKKTYVIRVIELYANYREALVEAQADESEGADILLVKPGLPYLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIILTYFALQAA 644
            G+  V+IMSY+AKYASSFYGPFREA ES P+FGD+K+Y + +     N REAL E   D  EGAD++LVKP LPYLD+IR+ +D++ +PI  Y VSGEY+M++A      +D ++V+ E L+ ++RAGAD I+TY+A + A
Sbjct:  192 GYDDVAIMSYSAKYASSFYGPFREAAESAPKFGDRKSYQMDI----GNAREALKEIALDIEEGADLILVKPALPYLDIIRMAKDRFDVPIGGYCVSGEYAMVEAAARNGWLDREKVIYEILLSIKRAGADFIITYWAKEVA 328          
BLAST of DN617665 vs. ExPASy Swiss-Prot
Match: HEM2_SYNE7 (Delta-aminolevulinic acid dehydratase OS=Synechococcus elongatus (strain PCC 7942) GN=hemB PE=3 SV=2)

HSP 1 Score: 155.221 bits (391), Expect = 2.629e-37
Identity = 78/144 (54.17%), Postives = 104/144 (72.22%), Query Frame = -3
Query:  213 GFQHVSIMSYTAKYASSFYGPFREALESNPRFGDKKTYVIRVIELYANYREALVEAQADESEGADILLVKPGLPYLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIILTYFALQAARCL 644
            GF    IM+Y+AKYAS++YGPFR+A ES P+FGD++TY +       N REAL E + D +EGADI++VKP L Y+D+I  +++   LP+AAY VSGEYSM+KA      IDE+RV++E+L   +RAGAD+ILTY A  AAR L
Sbjct:  186 GFSDTPIMAYSAKYASAYYGPFRDAAESTPQFGDRRTYQMDP----GNSREALKEVELDVAEGADIVMVKPALSYMDIICRIKETTDLPVAAYNVSGEYSMVKAAALNGWIDEERVVLETLTSFKRAGADLILTYHAKDAARWL 325          
BLAST of DN617665 vs. ExPASy Swiss-Prot
Match: HEM2_SYNY3 (Delta-aminolevulinic acid dehydratase OS=Synechocystis sp. (strain PCC 6803) GN=hemB PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 2.907e-36
Identity = 76/143 (53.15%), Postives = 104/143 (72.73%), Query Frame = -3
Query:  213 FQHVSIMSYTAKYASSFYGPFREALESNPRFGDKKTYVIRVIELYANYREALVEAQADESEGADILLVKPGLPYLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIILTYFALQAARCL 641
            FQ++ I+SY AKYAS++YGPFR+A +S+P+FGD++TY +       N REAL E + D  EGAD+++VKP L Y+D+I  +++   LP+AAY VSGEYSM+KA      IDEQ+V +E+L   +RAGAD+ILTY A  AAR L
Sbjct:  187 FQNIPILSYAAKYASAYYGPFRDAADSSPQFGDRRTYQMDP----GNSREALKEVELDLLEGADMVMVKPALSYMDIIWRIKEMTNLPVAAYNVSGEYSMVKAAALNGWIDEQKVTLETLTSFKRAGADLILTYHAKDAARWL 325          
BLAST of DN617665 vs. ExPASy Swiss-Prot
Match: HEM2_BACSU (Delta-aminolevulinic acid dehydratase OS=Bacillus subtilis GN=hemB PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.443e-35
Identity = 74/144 (51.39%), Postives = 102/144 (70.83%), Query Frame = -3
Query:  213 GFQHVSIMSYTAKYASSFYGPFREALESNPRFGDKKTYVIRVIELYANYREALVEAQADESEGADILLVKPGLPYLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIILTYFALQAARCL 644
            GF ++ IMSY  KY+S FYGPFR+A  S P+FGD+KTY +      AN  EAL EAQ+D  EGAD L+VKP L Y+D++R +++++ LP+ AY VSGEYSM+KA      I E+ +++E L  ++RAGAD+I+TY A  AA+ L
Sbjct:  183 GFVNIPIMSYAVKYSSEFYGPFRDAANSTPQFGDRKTYQMDP----ANRMEALREAQSDVEEGADFLIVKPSLSYMDIMRDVKNEFTLPLVAYNVSGEYSMVKAAAQNGWIKEKEIVLEILTSMKRAGADLIITYHAKDAAKWL 322          
BLAST of DN617665 vs. ExPASy Swiss-Prot
Match: HEM2_HELPY (Delta-aminolevulinic acid dehydratase OS=Helicobacter pylori GN=hemB PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.214e-35
Identity = 70/144 (48.61%), Postives = 102/144 (70.83%), Query Frame = -3
Query:  213 GFQHVSIMSYTAKYASSFYGPFREALESNPRFGDKKTYVIRVIELYANYREALVEAQADESEGADILLVKPGLPYLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIILTYFALQAARCL 644
            G+ H  IMSY+ K+ASS+YGPFR+   S P FGD+K+Y +     YAN +EAL+E+  DE +GADIL+VKP L YLD+++ +RD   LP+A Y VSGEY+M+K      +I+ + V++E++ C +RAGAD+I++Y A + A  L
Sbjct:  181 GYTHTPIMSYSTKFASSYYGPFRDVANSAPSFGDRKSYQMD----YANQKEALLESLEDEKQGADILMVKPALAYLDIVKEIRDHTLLPLALYNVSGEYAMLKLAQKHNLINYESVLLETMTCFKRAGADMIISYHAKEVANLL 320          
BLAST of DN617665 vs. ExPASy Swiss-Prot
Match: HEM2_STAES (Delta-aminolevulinic acid dehydratase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=hemB PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 5.482e-35
Identity = 73/144 (50.69%), Postives = 102/144 (70.83%), Query Frame = -3
Query:  213 GFQHVSIMSYTAKYASSFYGPFREALESNPRFGDKKTYVIRVIELYANYREALVEAQADESEGADILLVKPGLPYLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIILTYFALQAARCL 644
            G+Q++ IMSY  KYASSF+GPFR+A +S P FGD+KTY +      AN  EAL E ++D  EG D+++VKP L YLD+IR +++   +P+ AY VSGEYSM KA      IDE++++ME ++ ++RAGAD+I+TYFA    R L
Sbjct:  183 GYQNIPIMSYGIKYASSFFGPFRDAADSAPSFGDRKTYQMDP----ANRLEALRELESDLKEGCDMMIVKPSLSYLDIIRDVKNNTNVPVVAYNVSGEYSMTKAAALNGWIDEEKIVMEQMISMKRAGADLIITYFAKDICRYL 322          
BLAST of DN617665 vs. ExPASy Swiss-Prot
Match: HEM2_STAEQ (Delta-aminolevulinic acid dehydratase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=hemB PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 5.482e-35
Identity = 73/144 (50.69%), Postives = 102/144 (70.83%), Query Frame = -3
Query:  213 GFQHVSIMSYTAKYASSFYGPFREALESNPRFGDKKTYVIRVIELYANYREALVEAQADESEGADILLVKPGLPYLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIILTYFALQAARCL 644
            G+Q++ IMSY  KYASSF+GPFR+A +S P FGD+KTY +      AN  EAL E ++D  EG D+++VKP L YLD+IR +++   +P+ AY VSGEYSM KA      IDE++++ME ++ ++RAGAD+I+TYFA    R L
Sbjct:  183 GYQNIPIMSYGIKYASSFFGPFRDAADSAPSFGDRKTYQMDP----ANRLEALRELESDLKEGCDMMIVKPSLSYLDIIRDVKNNTNVPVVAYNVSGEYSMTKAAALNGWIDEEKIVMEQMISMKRAGADLIITYFAKDICRYL 322          
The following BLAST results are available for this feature:
BLAST of DN617665 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
HEM2_CHLTE7.392e-4057.86Delta-aminolevulinic acid dehydratase OS=Chlorobiu... [more]
HEM2_AQUAE2.151e-3954.86Delta-aminolevulinic acid dehydratase OS=Aquifex a... [more]
HEM2_BACHD1.180e-3755.41Delta-aminolevulinic acid dehydratase OS=Bacillus ... [more]
HEM2_METJA1.541e-3753.19Delta-aminolevulinic acid dehydratase OS=Methanoca... [more]
HEM2_SYNE72.629e-3754.17Delta-aminolevulinic acid dehydratase OS=Synechoco... [more]
HEM2_SYNY32.907e-3653.15Delta-aminolevulinic acid dehydratase OS=Synechocy... [more]
HEM2_BACSU1.443e-3551.39Delta-aminolevulinic acid dehydratase OS=Bacillus ... [more]
HEM2_HELPY3.214e-3548.61Delta-aminolevulinic acid dehydratase OS=Helicobac... [more]
HEM2_STAES5.482e-3550.69Delta-aminolevulinic acid dehydratase OS=Staphyloc... [more]
HEM2_STAEQ5.482e-3550.69Delta-aminolevulinic acid dehydratase OS=Staphyloc... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01I10_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001I10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617665 ID=DN617665; Name=DN617665; organism=Citrus sinensis; type=EST; length=646bp
TTTTTTTTTTTTTTTTTGACGCAAACATAAATTTAAGCACATTATTTATT
TCATCTATTCAGAGAGCACACTGCAAACAAATTTTGAAAATTTCCTTCAA
AATTTCAAATTCATTTTTCAATGTTAAGTACTAAAAAGGATAGGGCTTCT
AGAGCTTTATCAAAACTAACAACGCCTTATTACTCTGACAGTTCTCACCT
CTTCTCACCACATAAACATCTAGCAGCTTGTAGAGCAAAATATGTGAGGA
TGATATCAGCACCAGCCCGTCGAAGGCACATCAAGGACTCCATCATAACC
CTCTGCTCATCAATCATTTTGAGAGCACCACCAGCCTTGATCATTGAGTA
TTCACCAGATACCTGATATGCAGCAATCGGCAGAGGATATTTATCCCTGA
GAAGCCTAATGACATCCAAATAAGGAAGACCCGGTTTCACCAAAAGGATG
TCAGCTCCTTCTGATTCGTCTGCTTGGGCTTCAACTAGAGCCTCTCTGTA
ATTTGCATATAATTCAATAACTCTAATCACATACGTCTTTTTATCTCCAA
AACGTGGATTTGACTCTAGTGCTTCCCGAAATGGACCATAAAATGAACTT
GCATATTTGGCTGTATAGGACATGATAGAAACATGCTGAAAACCTT
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