DN617665

Overview
NameDN617665
Unique NameDN617665
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length646
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617665 vs. ExPASy Swiss-Prot
Match: HEM2_PROFF (Delta-aminolevulinic acid dehydratase OS=Propionibacterium freudenreichii subsp. freudenreichii GN=hemB PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 6.717e-25
Identity = 62/141 (43.97%), Postives = 91/141 (64.54%), Query Frame = -3
Query:  222 GFQHVSIMSYTAKYASSFYGPFREALESNPRFGDKKTYVIRVIELYANYREALVEAQADESEGADILLVKPGLPYLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIILTYFALQAA 644
            G     +M+Y+AKYAS F+GPFREA++S  + GD++ Y     +  AN  E+L E + D  +GAD ++VKP + YLDV+   R    +P+AAY VSGEYSMI+       +D +R +ME+L  ++RAGA  I+TY+A + A
Sbjct:  189 GHTDTVLMAYSAKYASGFFGPFREAVDSQLK-GDRRAYQ----QDPANAIESLREIELDLEQGADFVMVKPAMAYLDVLAAARAISNVPVAAYVVSGEYSMIEFAAKAGALDRKRCIMEALTSVKRAGASTIVTYWATEVA 324          
BLAST of DN617665 vs. ExPASy Swiss-Prot
Match: HEM2_SCHPO (Delta-aminolevulinic acid dehydratase OS=Schizosaccharomyces pombe GN=hem2 PE=2 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 1.401e-22
Identity = 62/136 (45.59%), Postives = 86/136 (63.24%), Query Frame = -3
Query:  237 VSIMSYTAKYASSFYGPFREALESNPRFGDKKTYVIRVIELYANYREALVEA-QADESEGADILLVKPGLPYLDVIRL---LRDKYPLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIILTYF 632
            V ++SY+AK+AS F+GPFR A    P+FGD+  Y     +L  N R     A   D  EGAD ++VKPG PYLD++ +   L D   LPIA YQVSGE+++I A  A  + + +R +ME++    RAGA+I+LTYF
Sbjct:  191 VCVISYSAKFASGFFGPFRAAANGAPKFGDRSCY-----QLPCNARGLAKRAILRDVREGADGIMVKPGTPYLDILAMASKLADD--LPIATYQVSGEFAIIHAAAAAGVFELKRHVMETMDGFMRAGANIVLTYF 319          
BLAST of DN617665 vs. ExPASy Swiss-Prot
Match: HEM2_YEAST (Delta-aminolevulinic acid dehydratase OS=Saccharomyces cerevisiae GN=HEM2 PE=1 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 7.953e-18
Identity = 55/135 (40.74%), Postives = 78/135 (57.78%), Query Frame = -3
Query:  234 IMSYTAKYASSFYGPFREALESNPRFGDKKTYVIRVIELYANYREALVEAQADESEGADILLVKPGLPYLDVIR----LLRDKYPLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIILTYFA 626
            ++SY AK++ + YGPFR+A  S P  GD+K Y +      A    A    + D SEGAD ++VKP   YLD++R    + +D   LPI AY VSGEY+M+ A     ++D + +  ES     RAGA +I+TY A
Sbjct:  204 VLSYAAKFSGNLYGPFRDAACSAPSNGDRKCYQLPP----AGRGLARRALERDMSEGADGIIVKPSTFYLDIMRDASEICKD---LPICAYHVSGEYAMLHAAAEKGVVDLKTIAFESHQGFLRAGARLIITYLA 331          
BLAST of DN617665 vs. ExPASy Swiss-Prot
Match: HEM2_CANGA (Delta-aminolevulinic acid dehydratase OS=Candida glabrata GN=HEM2 PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.022e-17
Identity = 52/131 (39.69%), Postives = 77/131 (58.78%), Query Frame = -3
Query:  237 IMSYTAKYASSFYGPFREALESNPRFGDKKTYVIRVIELYANYREALVEAQADESEGADILLVKPGLPYLDVIRLLRDKYP-LPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIILTYF 626
            ++SY AK++ + YGPFR+A  S+P  GD+K Y +      A    A      D++EGAD ++VKP   YLD++R   +    LPI AY VSGEY+M+ A     ++D + +  ES     RAGA +I++YF
Sbjct:  204 VLSYAAKFSGNLYGPFRDAACSSPSNGDRKCYQLP----QAGRGLARRALARDKNEGADGIIVKPSTFYLDIMRDASEICEDLPICAYHVSGEYAMLHAAAEKGIVDLKSIAFESHEGFLRAGARLIISYF 330          
BLAST of DN617665 vs. ExPASy Swiss-Prot
Match: HEM2_ASHGO (Delta-aminolevulinic acid dehydratase OS=Ashbya gossypii GN=HEM2 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 9.721e-16
Identity = 52/134 (38.81%), Postives = 77/134 (57.46%), Query Frame = -3
Query:  240 IMSYTAKYASSFYGPFREALESNPRFGDKKTYVIRVIELYANYREALVEA-QADESEGADILLVKPGLPYLDVI----RLLRDKYPLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIILTY 626
            +MSY AK++ + YGPFR+A  S P  GD+K Y     +L +  R     A + D  EGAD ++VKP   YLD++     + +D   +PI AY VSGEY+M+ A     ++D + +  ES     RAGA +I++Y
Sbjct:  205 VMSYAAKFSGNLYGPFRDAACSAPSQGDRKCY-----QLPSGGRGLARRALRRDLDEGADGIIVKPSTFYLDIMADASEIAKD---VPICAYHVSGEYAMLHAAAKAGVVDFKSIAFESHQGFLRAGARLIISY 330          
The following BLAST results are available for this feature:
BLAST of DN617665 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
HEM2_PROFF6.717e-2543.97Delta-aminolevulinic acid dehydratase OS=Propionib... [more]
HEM2_SCHPO1.401e-2245.59Delta-aminolevulinic acid dehydratase OS=Schizosac... [more]
HEM2_YEAST7.953e-1840.74Delta-aminolevulinic acid dehydratase OS=Saccharom... [more]
HEM2_CANGA3.022e-1739.69Delta-aminolevulinic acid dehydratase OS=Candida g... [more]
HEM2_ASHGO9.721e-1638.81Delta-aminolevulinic acid dehydratase OS=Ashbya go... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01I10_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001I10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617665 ID=DN617665; Name=DN617665; organism=Citrus sinensis; type=EST; length=646bp
TTTTTTTTTTTTTTTTTGACGCAAACATAAATTTAAGCACATTATTTATT
TCATCTATTCAGAGAGCACACTGCAAACAAATTTTGAAAATTTCCTTCAA
AATTTCAAATTCATTTTTCAATGTTAAGTACTAAAAAGGATAGGGCTTCT
AGAGCTTTATCAAAACTAACAACGCCTTATTACTCTGACAGTTCTCACCT
CTTCTCACCACATAAACATCTAGCAGCTTGTAGAGCAAAATATGTGAGGA
TGATATCAGCACCAGCCCGTCGAAGGCACATCAAGGACTCCATCATAACC
CTCTGCTCATCAATCATTTTGAGAGCACCACCAGCCTTGATCATTGAGTA
TTCACCAGATACCTGATATGCAGCAATCGGCAGAGGATATTTATCCCTGA
GAAGCCTAATGACATCCAAATAAGGAAGACCCGGTTTCACCAAAAGGATG
TCAGCTCCTTCTGATTCGTCTGCTTGGGCTTCAACTAGAGCCTCTCTGTA
ATTTGCATATAATTCAATAACTCTAATCACATACGTCTTTTTATCTCCAA
AACGTGGATTTGACTCTAGTGCTTCCCGAAATGGACCATAAAATGAACTT
GCATATTTGGCTGTATAGGACATGATAGAAACATGCTGAAAACCTT
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