DN617664

Overview
NameDN617664
Unique NameDN617664
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length770
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5965 contig Csv1_Contig5965:44..814. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617664 vs. ExPASy Swiss-Prot
Match: NAC19_ARATH (NAC domain-containing protein 19 OS=Arabidopsis thaliana GN=NAC019 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.773e-18
Identity = 47/80 (58.75%), Postives = 57/80 (71.25%), Query Frame = -3
Query:  535 GYWKATGADKPIG-KPKTLCIKKALVFYAGKAPKGIKTNWIMHEYRPANVHRSPATKN-NLRLDDWVLCRLYNKKGRMEK 768
            GYWKATG DK I  + + + IKKALVFY GKAPKG KTNWIMHEYR       P+ +N + +LDDWVLCR+Y K+   +K
Sbjct:   93 GYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLI----EPSRRNGSTKLDDWVLCRIYKKQSSAQK 168          
BLAST of DN617664 vs. ExPASy Swiss-Prot
Match: NAC31_ARATH (Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thaliana GN=NAC031 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.990e-15
Identity = 41/91 (45.05%), Postives = 57/91 (62.64%), Query Frame = -3
Query:  505 GYWKATGADKPI---GKPKTLCIKKALVFYAGKAPKGIKTNWIMHEYRPANVHRSPATKNNLRLDDWVLCRLYNKKGRMEKHYPSDQKSIG 768
            GYWKATG DK +   G  + + +KK LVFY G+AP+G+KT W+MHEYR  N H    T      ++WV+CR++NK G        D+K++G
Sbjct:  101 GYWKATGKDKEVFSGGGGQLVGMKKTLVFYKGRAPRGLKTKWVMHEYRLENDHSHRHTCK----EEWVICRVFNKTG--------DRKNVG 179          
BLAST of DN617664 vs. ExPASy Swiss-Prot
Match: NAC22_ARATH (NAC domain-containing protein 21/22 OS=Arabidopsis thaliana GN=NAC021 PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.938e-14
Identity = 36/73 (49.32%), Postives = 50/73 (68.49%), Query Frame = -3
Query:  553 GYWKATGADKPI-GKPKTLCIKKALVFYAGKAPKGIKTNWIMHEYRPANVHRSPATKNNLRLDDWVLCRLYNK 768
            GYWKATG D+ I  K K + ++K LVFY G+AP+G KT+W+MHE+R    H  P    +   +DWVLCR+++K
Sbjct:   99 GYWKATGKDRTILRKGKLVGMRKTLVFYQGRAPRGRKTDWVMHEFRLQGSHHPPNHSLSSPKEDWVLCRVFHK 171          
BLAST of DN617664 vs. ExPASy Swiss-Prot
Match: NAC77_ORYSJ (NAC domain-containing protein 77 OS=Oryza sativa subsp. japonica GN=NAC77 PE=2 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 3.655e-13
Identity = 42/94 (44.68%), Postives = 56/94 (59.57%), Query Frame = -3
Query:  550 GYWKATGADKPI-----------------GKPKTLCIKKALVFYAGKAPKGIKTNWIMHEYR-PANVHRSPATKNNLRL---DDWVLCRLYNKK 768
            GYWKATG D+ I                  K + + +KK LVFY G+APKG KTNW+MHE+R  AN+H       NLRL   D+WV+C++++KK
Sbjct:   98 GYWKATGKDREIFRQPAAVNTSSYGGSSNKKKQLVGMKKTLVFYMGRAPKGTKTNWVMHEFRLHANLHNH---HPNLRLNPKDEWVVCKVFHKK 188          
BLAST of DN617664 vs. ExPASy Swiss-Prot
Match: NAC98_ARATH (Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana GN=NAC098 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.369e-12
Identity = 61/208 (29.33%), Postives = 92/208 (44.23%), Query Frame = -3
Query:  190 GYWKATGADKPIGKPKTLCI---KKALVFYAGKAPKGIKTNWIMHEYRPANVHRSPATKNNLRLDDWVLCRLYNKKGRMEKHYPSD---------QKSIGFPELEEDRKPNINISRQEVALGMPPHQGSPAPMMN---DLLHMDTSDSVPRLQTDSSCSEHVLSPEITCDKEVQSMPKWNDLGNALNDDYNQFNFNYMDTNSFQDDPF 768
            GYWKATG D+ I   KT  +   KK LVFY G+APKG K+NW+MHEYR            + + D+WV+ R++ K         S+           S G    ++ + P+  ISR        P   S  P+++    L + D+S S     T+++ +   ++  ++C   V +         AL  D N F+        F  DPF
Sbjct:   96 GYWKATGKDREIFSSKTCALVGMKKTLVFYKGRAPKGEKSNWVMHEYRLEGKFSYHFISRSSK-DEWVISRVFQKTTLASTGAVSEGGGGGGATVSVSSGTGPSKKTKVPS-TISRNYQEQPSSPSSVSLPPLLDPTTTLGYTDSSCSYDSRSTNTTVTASAITEHVSCFSTVPTTT------TALGLDVNSFS-RLPPPLGFDFDPF 294          
BLAST of DN617664 vs. ExPASy Swiss-Prot
Match: NAC9_ARATH (Putative NAC domain-containing protein 9 OS=Arabidopsis thaliana GN=NAC009 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.094e-12
Identity = 36/81 (44.44%), Postives = 51/81 (62.96%), Query Frame = -3
Query:  553 GYWKATGADKPIGKP---KTLCIKKALVFYAGKAPKGIKTNWIMHEYR-PANVHRSPATKNNLRL-----DDWVLCRLYNK 768
            G+WKATG D+PI      K + +KK+LVFY G+A KG+KT+W+MHE+R P+    SP +K          D W +CR++ K
Sbjct:   95 GFWKATGTDRPIYSSEGNKCIGLKKSLVFYKGRAAKGVKTDWMMHEFRLPSLSEPSPPSKRFFDSPVSPNDSWAICRIFKK 175          
BLAST of DN617664 vs. ExPASy Swiss-Prot
Match: NAC78_ARATH (NAC domain-containing protein 78 OS=Arabidopsis thaliana GN=NAC078 PE=2 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 6.893e-12
Identity = 37/96 (38.54%), Postives = 57/96 (59.38%), Query Frame = -3
Query:  484 GYWKATGADKPIGK-PKTLCIKKALVFYAGKAPKGIKTNWIMHEYRPANVHRSPATKNNLRLDDWVLCRLYNKKGRMEKHYPSDQKSIGFPELEED 768
            GYWK TG D+ I    + + +KK LV++ G+AP+G +TNW+MHEYR ++       K  +  + +VLCR++ K G      P + +  G P LEE+
Sbjct:   90 GYWKTTGKDREIRNGSRVVGMKKTLVYHKGRAPRGERTNWVMHEYRLSD---EDLKKAGVPQEAYVLCRIFQKSGT----GPKNGEQYGAPYLEEE 178          
BLAST of DN617664 vs. ExPASy Swiss-Prot
Match: NAC54_ARATH (Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thaliana GN=NAC054 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.893e-12
Identity = 37/77 (48.05%), Postives = 48/77 (62.34%), Query Frame = -3
Query:  547 GYWKATGADKPIGKPKT---LCIKKALVFYAGKAPKGIKTNWIMHEYRPANVHRSPATKNNLRLDDWVLCRLYNKKG 768
            GYWKATG D+ I   KT   L +KK LVFY G+APKG K+ W+MHEYR           ++ + D+WVLC++  K G
Sbjct:   99 GYWKATGKDREIKSSKTKSLLGMKKTLVFYKGRAPKGEKSCWVMHEYRLDGKFSYHYISSSAK-DEWVLCKVCLKSG 174          
BLAST of DN617664 vs. ExPASy Swiss-Prot
Match: NAC76_ORYSJ (NAC domain-containing protein 76 OS=Oryza sativa subsp. japonica GN=NAC76 PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.176e-11
Identity = 37/94 (39.36%), Postives = 53/94 (56.38%), Query Frame = -3
Query:  493 GYWKATGADKPI--GKPKTLCIKKALVFYAGKAPKGIKTNWIMHEYRPANVHRSPATKNNLRLDDWVLCRLYNKKGRMEKHYPSDQKSIGFPEL 768
            G+WKATG DK I       + ++K LVFY G+AP G KT+WIMHEY      R      +++ D WV+CR++ KK       P+D  ++   +L
Sbjct:   92 GFWKATGRDKAIFLANACRIGMRKTLVFYVGRAPHGKKTDWIMHEY------RLDQDNVDVQEDGWVVCRVFMKKSYQRGLNPADMAAVDDDDL 179          
BLAST of DN617664 vs. ExPASy Swiss-Prot
Match: NAC94_ARATH (Putative NAC domain-containing protein 94 OS=Arabidopsis thaliana GN=ANAC094 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.005e-11
Identity = 41/122 (33.61%), Postives = 63/122 (51.64%), Query Frame = -3
Query:  466 GYWKATGADKPI-GKPKTLCI--KKALVFYAGKAPKGIKTNWIMHEYRPANV----HRSPATKNNLRL--------------DDWVLCRLYNKKGRMEKHYPSDQKSIGFPELEEDRKPNIN 768
            G+WKATG D+PI     T CI  KK+LVFY G+A KG+KT+W+MHE+R  ++    H S    NN +               D W +CR++ K   +       Q  + +P + ++ + + N
Sbjct:   99 GFWKATGTDRPIYSLDSTRCIGLKKSLVFYRGRAAKGVKTDWMMHEFRLPSLSDSHHSSYPNYNNKKQHLNNNNNSKELPSNDAWAICRIFKKTNAVSSQRSIPQSWV-YPTIPDNNQQSHN 219          
The following BLAST results are available for this feature:
BLAST of DN617664 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
NAC19_ARATH3.773e-1858.75NAC domain-containing protein 19 OS=Arabidopsis th... [more]
NAC31_ARATH2.990e-1545.05Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thal... [more]
NAC22_ARATH1.938e-1449.32NAC domain-containing protein 21/22 OS=Arabidopsis... [more]
NAC77_ORYSJ3.655e-1344.68NAC domain-containing protein 77 OS=Oryza sativa s... [more]
NAC98_ARATH2.369e-1229.33Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thal... [more]
NAC9_ARATH3.094e-1244.44Putative NAC domain-containing protein 9 OS=Arabid... [more]
NAC78_ARATH6.893e-1238.54NAC domain-containing protein 78 OS=Arabidopsis th... [more]
NAC54_ARATH6.893e-1248.05Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thal... [more]
NAC76_ORYSJ1.176e-1139.36NAC domain-containing protein 76 OS=Oryza sativa s... [more]
NAC94_ARATH2.005e-1133.61Putative NAC domain-containing protein 94 OS=Arabi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01I09_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001I09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617664 ID=DN617664; Name=DN617664; organism=Citrus sinensis; type=EST; length=770bp
TTTTTTTAAAAAAATTTCTTCTACAATCTTGCACGAATAAGAATGCCCTA
CAATTGTGGTTTACAAAAGGATTATATAATACAGGACCTAGCATACTACG
ATGTATTGAACTTAAAATGGCTTCTGCAGAATCATAAAAAGGTCTTGATA
GGGTGATAACTGATCCATCTGATACTGAACTTGCGGGCCAAAAGGGTCGT
CTTGGAAGCTATTAGTGTCCATGTAGTTGAAATTGAACTGATTATAATCA
TCATTCAAGGCATTGCCTAGATCATTCCATTTGGGCATACTTTGGACCTC
CTTATCGCACGTGATCTCCGGCGACAACACGTGCTCGGAGCAACTCGAAT
CCGTCTGCAACCGGGGCACCGAGTCCGACGTATCCATATGTAATAGGTCA
TTCATCATTGGCGCAGGCGATCCCTGATGTGGAGGCATTCCTAATGCTAC
CTCTTGACGTGAAATGTTAATATTTGGTTTCCGATCCTCCTCCAGTTCTG
GGAATCCAATTGATTTTTGATCGCTGGGGTAATGTTTTTCCATCCTCCCC
TTCTTGTTGTACAATCGACATAATACCCAATCGTCAAGCCTTAGGTTGTT
TTTGGTGGCGGGGGATCTGTGAACATTAGCAGGGCGATATTCATGCATAA
TCCAATTAGTTTTGATTCCTTTAGGCGCTTTTCCAGCGTAGAACACAAGC
GCCTTTTTTATACAAAGAGTCTTCGGCTTCCCAATGGGCTTGTCCGCTCC
GGTCGCCTTCCAGTATCCGG
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