DN617663

Overview
NameDN617663
Unique NameDN617663
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length613
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DN617663_ssr73 microsatellite DN617663_ssr73:73..90. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig5965 contig Csv1_Contig5965:572..1184. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617663 vs. ExPASy Swiss-Prot
Match: NAC29_ARATH (NAC domain-containing protein 29 OS=Arabidopsis thaliana GN=NAC029 PE=2 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 2.522e-55
Identity = 97/155 (62.58%), Postives = 119/155 (76.77%), Query Frame = 1
Query:  136 LPPGFRFHPTDEELVNHYLCRKCAGLPISVPIIAEIDLYKYDPWELPEMARYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPI-GKPKTLGIKKALVFYAGKAPKGIKTNWIMHEYRPANVHRSPATKN-NLRLDDWVLCRLYNKKG 594
            LPPGFRFHPTDEEL+ +YL  +    P  V II E+D+YK+DPW+LPE   +GE EWYFFSPR+RKYPNG RPNRAA SGYWKATG DK I      +G+KKALVFY G+ PKGIKT+WIMHEYR  +  ++   +N ++RLD+WVLCR+Y K+G
Sbjct:    9 LPPGFRFHPTDEELIVYYLRNQTMSKPCPVSIIPEVDIYKFDPWQLPEKTEFGENEWYFFSPRERKYPNGVRPNRAAVSGYWKATGTDKAIHSGSSNVGVKKALVFYKGRPPKGIKTDWIMHEYRLHDSRKASTKRNGSMRLDEWVLCRIYKKRG 163          
BLAST of DN617663 vs. ExPASy Swiss-Prot
Match: NAC9_ARATH (Putative NAC domain-containing protein 9 OS=Arabidopsis thaliana GN=NAC009 PE=2 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 8.687e-48
Identity = 88/160 (55.00%), Postives = 114/160 (71.25%), Query Frame = 1
Query:  136 LPPGFRFHPTDEELVNHYLCRKCAGLPISVPIIAEIDLYKYDPWELPEMARYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKP---KTLGIKKALVFYAGKAPKGIKTNWIMHEYR-PANVHRSPATKNNLRL-----DDWVLCRLYNK 588
            L PGFRFHPTDEELV+ YL RK    P+S+ +I ++D+YKYDPW+LP+ A  GEKEWYF+ PRDRKY N SRPNR  G+G+WKATG D+PI      K +G+KK+LVFY G+A KG+KT+W+MHE+R P+    SP +K          D W +CR++ K
Sbjct:   16 LLPGFRFHPTDEELVSFYLKRKVQHNPLSIELIRQLDIYKYDPWDLPKFAMTGEKEWYFYCPRDRKYRNSSRPNRVTGAGFWKATGTDRPIYSSEGNKCIGLKKSLVFYKGRAAKGVKTDWMMHEFRLPSLSEPSPPSKRFFDSPVSPNDSWAICRIFKK 175          
BLAST of DN617663 vs. ExPASy Swiss-Prot
Match: NAC31_ARATH (Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thaliana GN=NAC031 PE=2 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 2.795e-46
Identity = 88/159 (55.35%), Postives = 111/159 (69.81%), Query Frame = 1
Query:  127 ELELPPGFRFHPTDEELVNHYLCRKCAGLPISVPIIAEIDLYKYDPWELPEMARYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPI---GKPKTLGIKKALVFYAGKAPKGIKTNWIMHEYRPANVHRSPATKNNLRLDDWVLCRLYNKKG 594
            E  LPPGFRFHPTDEEL+  YL  K     +S   I+E+DL + +PWELPEMA+ GE+EWYF+S RDRKYP G R NRA  +GYWKATG DK +   G  + +G+KK LVFY G+AP+G+KT W+MHEYR  N H    T      ++WV+CR++NK G
Sbjct:   19 ERGLPPGFRFHPTDEELITFYLASKIFHGGLSGIHISEVDLNRCEPWELPEMAKMGEREWYFYSLRDRKYPTGLRTNRATTAGYWKATGKDKEVFSGGGGQLVGMKKTLVFYKGRAPRGLKTKWVMHEYRLENDHSHRHTCK----EEWVICRVFNKTG 173          
BLAST of DN617663 vs. ExPASy Swiss-Prot
Match: NAC98_ARATH (Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana GN=NAC098 PE=1 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 2.616e-44
Identity = 87/154 (56.49%), Postives = 105/154 (68.18%), Query Frame = 1
Query:  136 LPPGFRFHPTDEELVNHYLCRKCAGLPISVPIIAEIDLYKYDPWELPEMARYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKT---LGIKKALVFYAGKAPKGIKTNWIMHEYRPANVHRSPATKNNLRLDDWVLCRLYNK 588
            LPPGFRFHPTDEEL+ HYL RK      S   IAE+DL K +PW+LP  A+ GEKEWYFFS RDRKYP G R NRA  +GYWKATG D+ I   KT   +G+KK LVFY G+APKG K+NW+MHEYR            + + D+WV+ R++ K
Sbjct:   17 LPPGFRFHPTDEELITHYLLRKVLDGCFSSRAIAEVDLNKCEPWQLPGRAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIFSSKTCALVGMKKTLVFYKGRAPKGEKSNWVMHEYRLEGKFSYHFISRSSK-DEWVISRVFQK 169          
BLAST of DN617663 vs. ExPASy Swiss-Prot
Match: NAC94_ARATH (Putative NAC domain-containing protein 94 OS=Arabidopsis thaliana GN=ANAC094 PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 2.616e-44
Identity = 83/170 (48.82%), Postives = 111/170 (65.29%), Query Frame = 1
Query:  142 PGFRFHPTDEELVNHYLCRKCAGLPISVPIIAEIDLYKYDPWELPEMARYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPI---GKPKTLGIKKALVFYAGKAPKGIKTNWIMHEYRPANV----HRSPATKNNLRL--------------DDWVLCRLYNK 588
            PGFRFHPTDEELV+ YL RK     +   +I ++D+YKYDPW+LP++A  GEKEWYF+ PRDRKY N +RPNR  G G+WKATG D+PI      + +G+KK+LVFY G+A KG+KT+W+MHE+R  ++    H S    NN +               D W +CR++ K
Sbjct:   22 PGFRFHPTDEELVSFYLKRKVLHKSLPFDLIKKVDIYKYDPWDLPKLAAMGEKEWYFYCPRDRKYRNSTRPNRVTGGGFWKATGTDRPIYSLDSTRCIGLKKSLVFYRGRAAKGVKTDWMMHEFRLPSLSDSHHSSYPNYNNKKQHLNNNNNSKELPSNDAWAICRIFKK 191          
BLAST of DN617663 vs. ExPASy Swiss-Prot
Match: NAC54_ARATH (Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thaliana GN=NAC054 PE=1 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 4.462e-44
Identity = 85/156 (54.49%), Postives = 107/156 (68.59%), Query Frame = 1
Query:  136 LPPGFRFHPTDEELVNHYLCRKCAGLPISVPIIAEIDLYKYDPWELPEMARYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKT---LGIKKALVFYAGKAPKGIKTNWIMHEYRPANVHRSPATKNNLRLDDWVLCRLYNKKG 594
            +PPGFRFHPTDEEL+ +YL +K      S   I+++DL K +PWELPE A+ GEKEWYFF+ RDRKYP G R NRA  +GYWKATG D+ I   KT   LG+KK LVFY G+APKG K+ W+MHEYR           ++ + D+WVLC++  K G
Sbjct:   20 MPPGFRFHPTDEELITYYLLKKVLDSNFSCAAISQVDLNKSEPWELPEKAKMGEKEWYFFTLRDRKYPTGLRTNRATEAGYWKATGKDREIKSSKTKSLLGMKKTLVFYKGRAPKGEKSCWVMHEYRLDGKFSYHYISSSAK-DEWVLCKVCLKSG 174          
BLAST of DN617663 vs. ExPASy Swiss-Prot
Match: NAC42_ARATH (NAC domain-containing protein 42 OS=Arabidopsis thaliana GN=NAC042 PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.435e-42
Identity = 83/158 (52.53%), Postives = 108/158 (68.35%), Query Frame = 1
Query:  127 ELELP-PGFRFHPTDEELVNHYLCRKCAGLPISVPIIAEIDLYKYDPWELPEMARYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPI-GKPKTLGIKKALVFYAGKAPKGIKTNWIMHEYRPANVHR--SPATKNNLRLDDWVLCRLYNK 588
            E E P PGFRFHPTDEEL+ +YL RK     I + +I +ID+YKYDPW+LP ++  GEKEWYFF  R RKY N  RPNR  GSG+WKATG DKP+      +G+KK+LV+Y G A KG KT+W+MHE+R  +  +  SPA +  +    W LCR++ +
Sbjct:   14 ENEAPLPGFRFHPTDEELLGYYLRRKVENKTIKLELIKQIDIYKYDPWDLPRVSSVGEKEWYFFCMRGRKYRNSVRPNRVTGSGFWKATGIDKPVYSNLDCVGLKKSLVYYLGSAGKGTKTDWMMHEFRLPSTTKTDSPAQQAEV----WTLCRIFKR 167          
BLAST of DN617663 vs. ExPASy Swiss-Prot
Match: NAC77_ORYSJ (NAC domain-containing protein 77 OS=Oryza sativa subsp. japonica GN=NAC77 PE=2 SV=2)

HSP 1 Score: 171.014 bits (432), Expect = 4.176e-42
Identity = 88/182 (48.35%), Postives = 113/182 (62.09%), Query Frame = 1
Query:  109 KMMKGAELELPPGFRFHPTDEELVNHYLCRKCAGLPISVPIIAEIDLYKYDPWELPEMARYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPI-----------------GKPKTLGIKKALVFYAGKAPKGIKTNWIMHEYR-PANVHRSPATKNNLRL---DDWVLCRLYNKK 591
            K+ +   L LPPGFRFHPTD E++  YL +K      +   I E+DL K +PW+LP  A+ GEKEWYFFS +D KYP G R NRA   GYWKATG D+ I                  K + +G+KK LVFY G+APKG KTNW+MHE+R  AN+H       NLRL   D+WV+C++++KK
Sbjct:   10 KLEQDGGLFLPPGFRFHPTDAEVILSYLLQKLLNPSFTSLPIGEVDLNKCEPWDLPSKAKMGEKEWYFFSHKDMKYPTGMRTNRATKEGYWKATGKDREIFRQPAAVNTSSYGGSSNKKKQLVGMKKTLVFYMGRAPKGTKTNWVMHEFRLHANLHNH---HPNLRLNPKDEWVVCKVFHKK 188          
BLAST of DN617663 vs. ExPASy Swiss-Prot
Match: NAC22_ARATH (NAC domain-containing protein 21/22 OS=Arabidopsis thaliana GN=NAC021 PE=1 SV=2)

HSP 1 Score: 169.088 bits (427), Expect = 1.587e-41
Identity = 79/156 (50.64%), Postives = 107/156 (68.59%), Query Frame = 1
Query:  127 ELELPPGFRFHPTDEELVNHYLCRKCAGLPISVPIIA-EIDLYKYDPWELPEMARYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPI-GKPKTLGIKKALVFYAGKAPKGIKTNWIMHEYRPANVHRSPATKNNLRLDDWVLCRLYNK 588
            E +LPPGFRFHP D+ELV  YL R+        P++  ++DL K +PW++P+MA  G K+WYF+S RDRKY  G R NRA  +GYWKATG D+ I  K K +G++K LVFY G+AP+G KT+W+MHE+R    H  P    +   +DWVLCR+++K
Sbjct:   16 EAKLPPGFRFHPKDDELVCDYLMRRSLHNNHRPPLVLIQVDLNKCEPWDIPKMACVGGKDWYFYSQRDRKYATGLRTNRATATGYWKATGKDRTILRKGKLVGMRKTLVFYQGRAPRGRKTDWVMHEFRLQGSHHPPNHSLSSPKEDWVLCRVFHK 171          
BLAST of DN617663 vs. ExPASy Swiss-Prot
Match: NAC7_ARATH (NAC domain-containing protein 7 OS=Arabidopsis thaliana GN=NAC007 PE=2 SV=2)

HSP 1 Score: 164.851 bits (416), Expect = 2.993e-40
Identity = 77/156 (49.36%), Postives = 106/156 (67.95%), Query Frame = 1
Query:  136 LPPGFRFHPTDEELVNHYLCRKCAGLPISVPIIAEIDLYKYDPWELPEMARYGEKE---WYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIG-KPKTLGIKKALVFYAGKAPKGIKTNWIMHEYRPANVHRSPATKNNLRLDDWVLCRLYNKK 591
            +PPGFRFHPTDEELV++YL +K A   I +  I +IDLYK +PW+L E+ + G +E   WYFFS +D+KYP G+R NRA  +G+WKATG DK I  +   +G++K LVFY G+AP G K++WIMHEYR          +     + WV+CR++ K+
Sbjct:    7 VPPGFRFHPTDEELVDYYLRKKVASKRIEIDFIKDIDLYKIEPWDLQELCKIGHEEQSDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYLRHSLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETDENGTPQE-----EGWVVCRVFKKR 157          
The following BLAST results are available for this feature:
BLAST of DN617663 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
NAC29_ARATH2.522e-5562.58NAC domain-containing protein 29 OS=Arabidopsis th... [more]
NAC9_ARATH8.687e-4855.00Putative NAC domain-containing protein 9 OS=Arabid... [more]
NAC31_ARATH2.795e-4655.35Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thal... [more]
NAC98_ARATH2.616e-4456.49Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thal... [more]
NAC94_ARATH2.616e-4448.82Putative NAC domain-containing protein 94 OS=Arabi... [more]
NAC54_ARATH4.462e-4454.49Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thal... [more]
NAC42_ARATH1.435e-4252.53NAC domain-containing protein 42 OS=Arabidopsis th... [more]
NAC77_ORYSJ4.176e-4248.35NAC domain-containing protein 77 OS=Oryza sativa s... [more]
NAC22_ARATH1.587e-4150.64NAC domain-containing protein 21/22 OS=Arabidopsis... [more]
NAC7_ARATH2.993e-4049.36NAC domain-containing protein 7 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01I09_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001I09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617663 ID=DN617663; Name=DN617663; organism=Citrus sinensis; type=EST; length=613bp
AACCAGGAGCAAAACATATGAAAGACCAAGCGAGTGAGCGAGCAAGCGAG
CAAGCAGGAGAGCAAGCAAGAGAGAAGAAGAAGAAGAAGAAATCAATTAA
TTAGTTAGAAGATGATGAAGGGAGCAGAGCTAGAGTTACCGCCAGGTTTC
AGATTTCACCCGACAGACGAGGAGCTGGTGAATCACTATTTGTGTAGGAA
ATGTGCAGGGCTACCGATTTCTGTTCCTATTATTGCCGAGATTGATCTCT
ACAAATACGATCCTTGGGAGCTACCCGAAATGGCACGGTACGGCGAAAAG
GAGTGGTATTTCTTTTCTCCAAGGGACAGGAAATATCCAAACGGTTCAAG
GCCGAACCGGGCGGCCGGATCCGGATACTGGAAGGCGACCGGAGCGGACA
AGCCCATTGGGAAGCCGAAGACTCTTGGTATAAAAAAGGCGCTTGTGTTC
TACGCTGGAAAAGCGCCTAAAGGAATCAAAACTAATTGGATTATGCATGA
ATATCGCCCTGCTAATGTTCACAGATCCCCCGCCACCAAAAACAACCTAA
GGCTTGACGATTGGGTATTATGTCGATTGTACAACAAGAAGGGGAGGATG
GAAAAACATTACC
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