DN617645

Overview
NameDN617645
Unique NameDN617645
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length418
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DN617645_ssr301 microsatellite DN617645_ssr301:301..312. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of DN617645 vs. ExPASy Swiss-Prot
Match: CRK29_ARATH (Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana GN=CRK29 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 1.824e-25
Identity = 61/135 (45.19%), Postives = 86/135 (63.70%), Query Frame = -1
Query:   20 FSFGVLLLETVSGKKNRGFYHSNNE--LNLLGHVWRLWKEGKVLEMVDSSVDNYPANEVLRCIHVGLLCVQENAEERPTMASVVLMLSSETATMPQPKTPGFCLGRNPIETDSSSSKHDETFTVNQVTVTMLNAR 418
            FSFGVL++E ++GK+N     + +E   +LL  VWR W+E  +L ++D S+     NE+LRCIH+GLLCVQE+A  RPTMA+V LML+S + T+P P  P F L    I ++ SSS      + N VTV+  + R
Sbjct:  545 FSFGVLVIEIITGKRNNNGGSNGDEDAEDLLSWVWRSWREDTILSVIDPSLTAGSRNEILRCIHIGLLCVQESAATRPTMATVSLMLNSYSFTLPTPLRPAFVLESVVIPSNVSSSTEGLQMSSNDVTVSEFSPR 679          
BLAST of DN617645 vs. ExPASy Swiss-Prot
Match: CRK22_ARATH (Cysteine-rich receptor-like protein kinase 22 OS=Arabidopsis thaliana GN=CRK22 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 1.824e-25
Identity = 52/104 (50.00%), Postives = 75/104 (72.12%), Query Frame = -1
Query:  119 FSFGVLLLETVSGKKNRGFYHSNNEL---NLLGHVWRLWKEGKVLEMVDSSVD-NYPANEVLRCIHVGLLCVQENAEERPTMASVVLMLSSETATMPQPKTPGF 418
            +SFG+L+LE +SGKKN   Y ++      NL+ + WRLW+ G  L+++DSS+  NY +NEV RCIH+ LLCVQEN E+RP ++++V ML+S T ++P P  PGF
Sbjct:  539 YSFGILILEIISGKKNSSLYQNDETTTAGNLVTYAWRLWRNGSQLKLLDSSIGRNYQSNEVTRCIHIALLCVQENPEDRPKLSTIVSMLTSNTISVPAPGIPGF 642          
BLAST of DN617645 vs. ExPASy Swiss-Prot
Match: CRK5_ARATH (Cysteine-rich receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=CRK5 PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 3.110e-25
Identity = 56/135 (41.48%), Postives = 86/135 (63.70%), Query Frame = -1
Query:   20 FSFGVLLLETVSGKKNRGFYHSNNEL-NLLGHVWRLWKEGKVLEMVDSSV-DNYPANEVLRCIHVGLLCVQENAEERPTMASVVLMLSSETATMPQPKTPGFCLGRNPIETDSSSSKHDETFTVNQVTVTMLNAR 418
            +SFGVL+LE +SG+KN   Y  +    NL+ + WRLW +G  L++VDSS  D+Y  NE++RCIH+ LLCVQE+ E RPTM+++V ML++ +  +  P+ PGF    N  +   S  K     +++  ++T+L  R
Sbjct:  526 YSFGVLVLEIISGRKNSSLYQMDASFGNLVTYTWRLWSDGSPLDLVDSSFRDSYQRNEIIRCIHIALLCVQEDTENRPTMSAIVQMLTTSSIALAVPQPPGFFFRSNHEQAGPSMDK-SSLCSIDAASITILAPR 659          
BLAST of DN617645 vs. ExPASy Swiss-Prot
Match: CRK15_ARATH (Cysteine-rich receptor-like protein kinase 15 OS=Arabidopsis thaliana GN=CRK15 PE=2 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 3.110e-25
Identity = 51/101 (50.50%), Postives = 72/101 (71.29%), Query Frame = -1
Query:  119 FSFGVLLLETVSGKKNRGFYHSNNELNLLGHVWRLWKEGKVLEMVDSSV-DNYPANEVLRCIHVGLLCVQENAEERPTMASVVLMLSSETATMPQPKTPGF 418
            +SFGVL+LE +SGKKN  FY ++   +L+ H WRLW  G  L++VD  + DN   +EV+RCIH+ LLCVQE+  ERP ++++ +ML+S T T+P P  PGF
Sbjct:  523 YSFGVLVLEIISGKKNNSFYETDGAHDLVTHAWRLWSNGTALDLVDPIIIDNCQKSEVVRCIHICLLCVQEDPAERPILSTIFMMLTSNTVTLPVPLQPGF 623          
BLAST of DN617645 vs. ExPASy Swiss-Prot
Match: CRK12_ARATH (Putative cysteine-rich receptor-like protein kinase 12 OS=Arabidopsis thaliana GN=CRK12 PE=2 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 3.110e-25
Identity = 57/138 (41.30%), Postives = 91/138 (65.94%), Query Frame = -1
Query:   20 FSFGVLLLETVSGKKNRGFYHSNNEL-NLLGHVWRLWKEGKVLEMVDSSV-DNYPANEVLRCIHVGLLCVQENAEERPTMASVVLMLSSETATMPQPKTPGFCLGRNPIETDSSSSKHD---ETFTVNQVTVTMLNAR 418
            +SFGVL+LE + GKKNR FY ++ +  NL+ +VWRLW  G  LE+VD ++ +N    EV+RCIH+ LLCVQE+ ++RP ++++++ML++ +  +  P+ PGF + +N       SS+      + T N VT+T L+ R
Sbjct:  553 YSFGVLILEIICGKKNRSFYQADTKAENLVTYVWRLWTNGSPLELVDLTISENCQTEEVIRCIHIALLCVQEDPKDRPNLSTIMMMLTNSSLILSVPQPPGFFVPQNKERDSFLSSQFTMGCTSQTKNDVTITNLDPR 690          
BLAST of DN617645 vs. ExPASy Swiss-Prot
Match: CRK28_ARATH (Cysteine-rich receptor-like protein kinase 28 OS=Arabidopsis thaliana GN=CRK28 PE=2 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 5.306e-25
Identity = 60/135 (44.44%), Postives = 84/135 (62.22%), Query Frame = -1
Query:   20 FSFGVLLLETVSGKKNRGFYHSNNEL--NLLGHVWRLWKEGKVLEMVDSSVDNYPANEVLRCIHVGLLCVQENAEERPTMASVVLMLSSETATMPQPKTPGFCLGRNPIETDSSSSKHDETFTVNQVTVTMLNAR 418
            FSFGVL++E ++GK N     +++E   NLL  VWR W+E  +L ++D S+     +E+LRCIH+GLLCVQE+   RPTM SV LML+S + T+P P  P F L       + SSS      ++N VTV+ L+ R
Sbjct:  549 FSFGVLVIEIITGKGNNNGRSNDDEEAENLLSWVWRCWREDIILSVIDPSLTTGSRSEILRCIHIGLLCVQESPASRPTMDSVALMLNSYSYTLPTPSRPAFALESVMPSMNVSSSTEPLLMSLNDVTVSELSPR 683          
BLAST of DN617645 vs. ExPASy Swiss-Prot
Match: CRK21_ARATH (Cysteine-rich receptor-like protein kinase 21 OS=Arabidopsis thaliana GN=CRK21 PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 5.306e-25
Identity = 51/102 (50.00%), Postives = 77/102 (75.49%), Query Frame = -1
Query:  119 FSFGVLLLETVSGKKNRGFYHSNNEL-NLLGHVWRLWKEGKVLEMVDSSV-DNYPANEVLRCIHVGLLCVQENAEERPTMASVVLMLSSETATMPQPKTPGF 418
            +SFGVL+LE + GKKN  F+  +  + NL+ HVWRL   G +LE+VD ++ +NY  +EV+RCIH+GLLCVQEN ++RP+M+++  ML++ + T+P P+ PGF
Sbjct:  549 YSFGVLILEIIGGKKNSSFHQIDGSVSNLVTHVWRLRNNGSLLELVDPAIGENYDKDEVIRCIHIGLLCVQENPDDRPSMSTIFRMLTNVSITLPVPQPPGF 650          
BLAST of DN617645 vs. ExPASy Swiss-Prot
Match: CRK19_ARATH (Cysteine-rich receptor-like protein kinase 19 OS=Arabidopsis thaliana GN=CRK19 PE=2 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 9.050e-25
Identity = 57/135 (42.22%), Postives = 84/135 (62.22%), Query Frame = -1
Query:   20 FSFGVLLLETVSGKKNRGFYHSNNEL-NLLGHVWRLWKEGKVLEMVDSSV-DNYPANEVLRCIHVGLLCVQENAEERPTMASVVLMLSSETATMPQPKTPGFCLGRNPIETDSSSSKHDETFTVNQVTVTMLNAR 418
            +SFGVL+LE +SG KN   Y  +  + NL+ + WRLW  G   E+VD S  DNY  +E+ RCIH+ LLCVQE+AE+RPTM+S+V ML++    + +P+ PGF   R+  E    S       +V++ ++T +  R
Sbjct:  512 YSFGVLVLEIISGMKNSSLYQMDESVGNLVTYTWRLWSNGSPSELVDPSFGDNYQTSEITRCIHIALLCVQEDAEDRPTMSSIVQMLTTSLIALAEPRPPGFFF-RSKQEQAGPSIDSSTHCSVDEASITRVTPR 645          
BLAST of DN617645 vs. ExPASy Swiss-Prot
Match: CRK11_ARATH (Cysteine-rich receptor-like protein kinase 11 OS=Arabidopsis thaliana GN=CRK11 PE=2 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 9.050e-25
Identity = 56/122 (45.90%), Postives = 80/122 (65.57%), Query Frame = -1
Query:   65 FSFGVLLLETVSGKKNRGFYHSNNEL---NLLGHVWRLWKEGKVLEMVDSSVD-NYPANEVLRCIHVGLLCVQENAEERPTMASVVLMLSSETATMPQPKTPGFCLGRNPIETDSSSSKHDE 418
            +SFGVL+LE +SGKKN G Y  +      NL+ +  RLW+    LE+VD +   NY +NEV RCIH+ LLCVQEN E+RP +++++LML+S T T+P P+ PGF      ++  S  S+ D+
Sbjct:  536 YSFGVLVLEIISGKKNSGVYQMDETSTAGNLVTYASRLWRNKSPLELVDPTFGRNYQSNEVTRCIHIALLCVQENPEDRPMLSTIILMLTSNTITLPVPRLPGFFPRSRQLKLVSEGSESDQ 657          
BLAST of DN617645 vs. ExPASy Swiss-Prot
Match: CRK18_ARATH (Cysteine-rich receptor-like protein kinase 18 OS=Arabidopsis thaliana GN=CRK18 PE=2 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 1.544e-24
Identity = 54/135 (40.00%), Postives = 87/135 (64.44%), Query Frame = -1
Query:   20 FSFGVLLLETVSGKKNRGFYHSNNELN-LLGHVWRLWKEGKVLEMVDSSVD-NYPANEVLRCIHVGLLCVQENAEERPTMASVVLMLSSETATMPQPKTPGFCLGRNPIETDSSSSKHDETFTVNQVTVTMLNAR 418
            +SFGVL+LE +SGKKN  FY  +  +N L+ +VW+LW+   + E++D  ++ ++ + EV+R IH+GLLCVQEN  +RPTM+++  ML++ + T+P P  PGF     P      S+      +V++ T+T +N R
Sbjct:  525 YSFGVLILEIISGKKNSSFYQMDGLVNNLVTYVWKLWENKSLHELLDPFINQDFTSEEVIRYIHIGLLCVQENPADRPTMSTIHQMLTNSSITLPVPLPPGFFFRNGPGSNPGQSNSKSFACSVDEATITDVNPR 659          
The following BLAST results are available for this feature:
BLAST of DN617645 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
CRK29_ARATH1.824e-2545.19Cysteine-rich receptor-like protein kinase 29 OS=A... [more]
CRK22_ARATH1.824e-2550.00Cysteine-rich receptor-like protein kinase 22 OS=A... [more]
CRK5_ARATH3.110e-2541.48Cysteine-rich receptor-like protein kinase 5 OS=Ar... [more]
CRK15_ARATH3.110e-2550.50Cysteine-rich receptor-like protein kinase 15 OS=A... [more]
CRK12_ARATH3.110e-2541.30Putative cysteine-rich receptor-like protein kinas... [more]
CRK28_ARATH5.306e-2544.44Cysteine-rich receptor-like protein kinase 28 OS=A... [more]
CRK21_ARATH5.306e-2550.00Cysteine-rich receptor-like protein kinase 21 OS=A... [more]
CRK19_ARATH9.050e-2542.22Cysteine-rich receptor-like protein kinase 19 OS=A... [more]
CRK11_ARATH9.050e-2545.90Cysteine-rich receptor-like protein kinase 11 OS=A... [more]
CRK18_ARATH1.544e-2440.00Cysteine-rich receptor-like protein kinase 18 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01H23_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001H23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617645 ID=DN617645; Name=DN617645; organism=Citrus sinensis; type=EST; length=418bp
ATACCTGTTTTTTTCACTACCTGGCATTTAACATTGTAACTGTGACCTGA
TTCACTGTAAATGTTTCATCATGCTTACTTGAAGATGAATCAGTTTCAAT
GGGATTTCTCCCTAGGCAAAATCCAGGGGTTTTAGGCTGGGGCATGGTTG
CAGTTTCACTACTCAACATCAAAACTACAGATGCCATAGTTGGCCTTTCT
TCAGCATTCTCTTGGACACATAAGAGGCCGACATGTATGCATCTCAGAAC
TTCATTTGCAGGATAATTATCCACTGATGAATCTACCATTTCCAACACCT
TTCCTTCCTTCCATAGTCTCCACACATGTCCAAGCAGGTTAAGTTCATTG
TTTGAGTGATAGAATCCTCTGTTCTTCTTACCACTTACTGTCTCCAATAA
TAAGACACCGAAACTAAA
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