DN617645

Overview
NameDN617645
Unique NameDN617645
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length418
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617645 vs. ExPASy Swiss-Prot
Match: CRK13_ARATH (Cysteine-rich receptor-like protein kinase 13 OS=Arabidopsis thaliana GN=CRK13 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 6.070e-21
Identity = 51/118 (43.22%), Postives = 76/118 (64.41%), Query Frame = -1
Query:   71 FSFGVLLLETVSGKKNRGFYHSNNELNLLGHVWRLWKEGKVLEMVDSSV-DNYPANEVLRCIHVGLLCVQENAEERPTMASVVLMLSSETATMPQPK-TPGFCLGRNPIETDSSSSKH 418
            +S+GVL+LE + GK+N  F  S+   N + +VWRLWK G  L +VD+++ +NY + EV+RCIH+ LLCVQE   +RP  + ++ ML+S +  +P PK  P F  GR    T   SS++
Sbjct:  544 YSYGVLVLEIICGKRNTSF--SSPVQNFVTYVWRLWKSGTPLNLVDATIAENYKSEEVIRCIHIALLCVQEEPTDRPDFSIIMSMLTSNSLILPVPKPPPSFIPGRPNQSTTRPSSQN 659          
BLAST of DN617645 vs. ExPASy Swiss-Prot
Match: CRK40_ARATH (Cysteine-rich receptor-like protein kinase 40 OS=Arabidopsis thaliana GN=CRK40 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 7.928e-21
Identity = 51/121 (42.15%), Postives = 74/121 (61.16%), Query Frame = -1
Query:   56 FSFGVLLLETVSGKKNRGFYHSNNELNLLGHVWRLWKEGKVLEMVDSSVDNYPANEVLRCIHVGLLCVQENAEERPTMASVVLMLSSETATMPQPKTPGFCLGRNPIETDSSSSKHDETFT 418
            +SFGV+LLE +SG++N  F        L    W+ W EGK   ++D  +   P NE+++ I +GLLCVQEN+ +RPTM+SV++ L SET  +P PK P F   R+  E+  + S  D+ FT
Sbjct:  534 YSFGVMLLEMISGERNNSFEGEG----LAAFAWKRWVEGKPEIIIDPFLIENPRNEIIKLIQIGLLCVQENSTKRPTMSSVIIWLGSETIIIPLPKAPAFTWIRSQSES-GAMSLSDDVFT 649          
BLAST of DN617645 vs. ExPASy Swiss-Prot
Match: CRK39_ARATH (Putative cysteine-rich receptor-like protein kinase 39 OS=Arabidopsis thaliana GN=CRK39 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.352e-20
Identity = 51/121 (42.15%), Postives = 72/121 (59.50%), Query Frame = -1
Query:   56 FSFGVLLLETVSGKKNRGFYHSNNELNLLGHVWRLWKEGKVLEMVDSSVDNYPANEVLRCIHVGLLCVQENAEERPTMASVVLMLSSETATMPQPKTPGFCLGRNPIETDSSSSKHDETFT 418
            +SFGV+LLE +SG++N  F        L    W+ W EGK   ++D  +   P NE+++ I +GLLCVQEN  +RPTM+SV++ L SET  +P PK P F   R+  E   + S  D+ FT
Sbjct:  539 YSFGVMLLEMISGERNNSFEGEG----LAAFAWKRWVEGKPEIIIDPFLIEKPRNEIIKLIQIGLLCVQENPTKRPTMSSVIIWLGSETNIIPLPKAPAFTGSRSQSEI-GAMSMSDDVFT 654          
BLAST of DN617645 vs. ExPASy Swiss-Prot
Match: CRK36_ARATH (Cysteine-rich receptor-like protein kinase 36 OS=Arabidopsis thaliana GN=CRK36 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.352e-20
Identity = 53/137 (38.69%), Postives = 82/137 (59.85%), Query Frame = -1
Query:   20 FSFGVLLLETVSGKKNRGFYHSNNELNLLGHVWRLWKEGKVLEMVDSSVDNYPANEVLRCIHVGLLCVQENAEERPTMASVVLMLSSE-TATMPQPKTPGFC---LGRNPIETDSSSSKHDETFTVNQVTVTMLNAR 418
            +SFGV+LLE +SG+KN+ F        L    W+ W EG++  ++D  ++  P NE+++ I +GLLCVQENA +RPTM SV+  L+ + T T+P+P    F    L   P     S  K  + F+V++V++T+L  R
Sbjct:  526 YSFGVMLLEMISGEKNKNFETEG----LPAFAWKRWIEGELESIIDPYLNENPRNEIIKLIQIGLLCVQENAAKRPTMNSVITWLARDGTFTIPKPTEAAFVTLPLSVKPENRSMSERKDKDPFSVDEVSITVLYPR 658          
BLAST of DN617645 vs. ExPASy Swiss-Prot
Match: CRK38_ARATH (Cysteine-rich receptor-like protein kinase 38 OS=Arabidopsis thaliana GN=CRK38 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.766e-20
Identity = 47/133 (35.34%), Postives = 79/133 (59.40%), Query Frame = -1
Query:   20 FSFGVLLLETVSGKKNRGFYHSNNELNLLGHVWRLWKEGKVLEMVDSSVDNYPANEVLRCIHVGLLCVQENAEERPTMASVVLMLSSETATMPQPKTPGFCLGRNPIETDSSSSKHDETFTVNQVTVTMLNAR 418
            +SFGV+LLE ++G+ N+ ++ +   L L  + W+ W  G+   ++D  +    +NE++R IH+GLLCVQEN  +RPTM+ V+  L SET  +P P   GF       E ++       T ++N++++T L+ R
Sbjct:  525 YSFGVVLLEMITGRSNKNYFEA---LGLPAYAWKCWVAGEAASIIDHVLSRSRSNEIMRFIHIGLLCVQENVSKRPTMSLVIQWLGSETIAIPLPTVAGFTNASYQAEHEAG------TLSLNELSITELSPR 648          
BLAST of DN617645 vs. ExPASy Swiss-Prot
Match: CRK27_ARATH (Cysteine-rich receptor-like protein kinase 27 OS=Arabidopsis thaliana GN=CRK27 PE=2 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 1.711e-15
Identity = 51/136 (37.50%), Postives = 77/136 (56.62%), Query Frame = -1
Query:   20 FSFGVLLLETVSGKKNRGFYHSNNELNLLGHVWRLWKEGKVLEMVDSSV-DNYPANEVLRCIHVGLLCVQENAEERPTMASVVLMLS--SETATMPQPKTPGFCLGRNPIETDSSSSKHDETFTVNQVTVTMLNAR 418
            +SFGVL+LE ++GK+N G        +L    W+ W EG  +E++D  +   +   E ++C+ + L CVQEN  +RPTM SVV MLS  SE+  +P+P  PGF          +S S      ++N V++T L+AR
Sbjct:  519 YSFGVLVLEIITGKRNSGLGLGEGT-DLPTFAWQNWIEGTSMELIDPVLLQTHDKKESMQCLEIALSCVQENPTKRPTMDSVVSMLSSDSESRQLPKPSQPGF------FRRSASFS-----ISLNDVSLTDLSAR 642          
BLAST of DN617645 vs. ExPASy Swiss-Prot
Match: CRK37_ARATH (Cysteine-rich receptor-like protein kinase 37 OS=Arabidopsis thaliana GN=CRK37 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.109e-14
Identity = 42/101 (41.58%), Postives = 61/101 (60.40%), Query Frame = -1
Query:  134 FSFGVLLLETVSGKKNRGFY--HSNNELNLLGHVWRLWKEGKVLEMVD---SSVDNYPANEVLRCIHVGLLCVQENAEERPTMASVVLMLSSE-TATMPQP 418
            +SFGV+LLE +SGK N+         E  L   VW+ W EG+  E++D   +  +N   NEV++ IH+GLLCVQE+  +RP++ S++  L    T TMP P
Sbjct:  531 YSFGVMLLEMISGKSNKKLEKEEEEEEEELPAFVWKRWIEGRFAEIIDPLAAPSNNISINEVMKLIHIGLLCVQEDISKRPSINSILFWLERHATITMPVP 631          
BLAST of DN617645 vs. ExPASy Swiss-Prot
Match: CRK43_ARATH (Putative cysteine-rich receptor-like protein kinase 43 OS=Arabidopsis thaliana GN=CRK43 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.470e-14
Identity = 39/101 (38.61%), Postives = 60/101 (59.41%), Query Frame = -1
Query:  119 FSFGVLLLETVSGKKNRGFYHSNNELNLLGHVWRLWKEGKVLEMVDSSV-DNYPANEVLRCIHVGLLCVQENAEERPTMASVVLMLSSETATMPQPKTPGF 418
            +SFGVL+LE  SG +N  F   N+   L+  VW+ +   K+ EM+D  + ++    E+ R + +GLLC QE+ + RPTM+ V+ M+SS    +P P  P F
Sbjct:  520 YSFGVLVLEITSGFRNNKFRSDNSLETLVTQVWKCFASNKMEEMIDKDMGEDTDKQEMKRVMQIGLLCTQESPQLRPTMSKVIQMVSSTDIVLPTPTKPPF 620          
BLAST of DN617645 vs. ExPASy Swiss-Prot
Match: CRK1_ARATH (Cysteine-rich receptor-like protein kinase 1 OS=Arabidopsis thaliana GN=CRK1 PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 8.786e-12
Identity = 35/101 (34.65%), Postives = 59/101 (58.42%), Query Frame = -1
Query:  119 FSFGVLLLETVSGKKNRGFYHSNNELNLLGHVWRLWKEGKVLEMVDSSVD-NYPANEVLRCIHVGLLCVQENAEERPTMASVVLMLSSETATMPQPKTPGF 418
            ++FGVL++E V+GKKN  F    +  ++L  VW  +K   +   +D  +  ++   E L+ + +GLLCVQ + E RP+M+ +V ML ++ +    PK P F
Sbjct:  503 YAFGVLIIEIVTGKKNNAFTQGTS--SVLYSVWEHFKANTLDRSIDPRLKGSFVEEEALKVLQIGLLCVQSSVELRPSMSEIVFMLQNKDSKFEYPKQPPF 601          
BLAST of DN617645 vs. ExPASy Swiss-Prot
Match: CRK3_ARATH (Cysteine-rich receptor-like protein kinase 3 OS=Arabidopsis thaliana GN=CRK3 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.556e-11
Identity = 40/104 (38.46%), Postives = 57/104 (54.81%), Query Frame = -1
Query:  122 FSFGVLLLETVSGKKNRGFYHSNNELNLLGHVWRLWKEGKVLEMVDSSV-DNYPANEVLRCIHVGLLCVQENAEERPTMASVVLM----LSSETATMPQPKTPG 418
            +SFGVL++E ++GK+N  F       ++L  VW L++   V E VD  + DN+   E  R + +GLLCVQ   ++RP M+ VV M    L   T T P    PG
Sbjct:  508 YSFGVLMIEVITGKRNNAFVQDAG--SILQSVWSLYRTSNVEEAVDPILGDNFNKIEASRLLQIGLLCVQAAFDQRPAMSVVVKMMKGSLEIHTPTQPPFLNPG 609          
The following BLAST results are available for this feature:
BLAST of DN617645 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
CRK13_ARATH6.070e-2143.22Cysteine-rich receptor-like protein kinase 13 OS=A... [more]
CRK40_ARATH7.928e-2142.15Cysteine-rich receptor-like protein kinase 40 OS=A... [more]
CRK39_ARATH1.352e-2042.15Putative cysteine-rich receptor-like protein kinas... [more]
CRK36_ARATH1.352e-2038.69Cysteine-rich receptor-like protein kinase 36 OS=A... [more]
CRK38_ARATH1.766e-2035.34Cysteine-rich receptor-like protein kinase 38 OS=A... [more]
CRK27_ARATH1.711e-1537.50Cysteine-rich receptor-like protein kinase 27 OS=A... [more]
CRK37_ARATH1.109e-1441.58Cysteine-rich receptor-like protein kinase 37 OS=A... [more]
CRK43_ARATH2.470e-1438.61Putative cysteine-rich receptor-like protein kinas... [more]
CRK1_ARATH8.786e-1234.65Cysteine-rich receptor-like protein kinase 1 OS=Ar... [more]
CRK3_ARATH2.556e-1138.46Cysteine-rich receptor-like protein kinase 3 OS=Ar... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS11_01H23_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001H23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617645 ID=DN617645; Name=DN617645; organism=Citrus sinensis; type=EST; length=418bp
ATACCTGTTTTTTTCACTACCTGGCATTTAACATTGTAACTGTGACCTGA
TTCACTGTAAATGTTTCATCATGCTTACTTGAAGATGAATCAGTTTCAAT
GGGATTTCTCCCTAGGCAAAATCCAGGGGTTTTAGGCTGGGGCATGGTTG
CAGTTTCACTACTCAACATCAAAACTACAGATGCCATAGTTGGCCTTTCT
TCAGCATTCTCTTGGACACATAAGAGGCCGACATGTATGCATCTCAGAAC
TTCATTTGCAGGATAATTATCCACTGATGAATCTACCATTTCCAACACCT
TTCCTTCCTTCCATAGTCTCCACACATGTCCAAGCAGGTTAAGTTCATTG
TTTGAGTGATAGAATCCTCTGTTCTTCTTACCACTTACTGTCTCCAATAA
TAAGACACCGAAACTAAA
back to top