DN617643

Overview
NameDN617643
Unique NameDN617643
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length462
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2169 contig Csv1_Contig2169:46..507. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of DN617643 vs. ExPASy Swiss-Prot
Match: EF1A1_RHIRA (Elongation factor 1-alpha OS=Rhizomucor racemosus GN=TEF-1 PE=3 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 9.833e-64
Identity = 118/135 (87.41%), Postives = 123/135 (91.11%), Query Frame = 2 
Query:   56 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTRE 460
            MGKEKTH+N+VVIGHVDSGKSTTTGHLIYK GGIDKR IE FEKEAAE+ K SFKYAWVLDKLKAERERGITIDIALWKFET +Y  TVIDAPGHRDFIKNMITGTSQADCA+LII   TG FEAGISKDGQTRE
Sbjct:    1 MGKEKTHVNVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEEFEKEAAELGKGSFKYAWVLDKLKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIAGGTGEFEAGISKDGQTRE 135
[Close]
BLAST of DN617643 vs. ExPASy Swiss-Prot
Match: EF1A_CAEEL (Elongation factor 1-alpha OS=Caenorhabditis elegans GN=eft-3 PE=2 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 1.284e-63
Identity = 117/135 (86.67%), Postives = 123/135 (91.11%), Query Frame = 2 
Query:   56 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTRE 460
            MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLDKLKAERERGITIDIALWKFET +YY T+IDAPGHRDFIKNMITGTSQADCAVL++   TG FEAGISK+GQTRE
Sbjct:    1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTRE 135
[Close]
BLAST of DN617643 vs. ExPASy Swiss-Prot
Match: EF1A_ORYLA (Elongation factor 1-alpha OS=Oryzias latipes GN=eef1a PE=2 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 1.677e-63
Identity = 117/135 (86.67%), Postives = 125/135 (92.59%), Query Frame = 2 
Query:   56 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTRE 460
            MGKEK HINIVVIGHVDSGKST+TGHLIYK GGIDKR IE+FEKEAAEM K SFKYAWVLDKLKAERERGITIDIALWKFET++YY T+IDAPGHRDFIKNMITGTSQADCAVLI+ +  G FEAGISK+GQTRE
Sbjct:    1 MGKEKIHINIVVIGHVDSGKSTSTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGVGEFEAGISKNGQTRE 135
[Close]
BLAST of DN617643 vs. ExPASy Swiss-Prot
Match: EF1A_AURPU (Elongation factor 1-alpha OS=Aureobasidium pullulans GN=TEF1 PE=3 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 1.677e-63
Identity = 117/135 (86.67%), Postives = 125/135 (92.59%), Query Frame = 2 
Query:   56 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTRE 460
            MGKEK+HIN+VVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEAAE+ K SFKYAWVLDKLK+ERERGITIDIALWKFET +Y  TVIDAPGHRDFIKNMITGTSQADCA+LII + TG FEAGISKDGQTRE
Sbjct:    1 MGKEKSHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAELGKGSFKYAWVLDKLKSERERGITIDIALWKFETPKYMVTVIDAPGHRDFIKNMITGTSQADCAILIIAAGTGEFEAGISKDGQTRE 135
[Close]
BLAST of DN617643 vs. ExPASy Swiss-Prot
Match: EF1A_TRIRE (Elongation factor 1-alpha OS=Trichoderma reesei GN=tef1 PE=3 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 2.190e-63
Identity = 119/136 (87.50%), Postives = 126/136 (92.65%), Query Frame = 2 
Query:   56 MGKE-KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTRE 460
            MGKE KTHIN+VVIGHVDSGKSTTTGHLIY+ GGIDKR IE+FEKEAAE+ K SFKYAWVLDKLKAERERGITIDIALWKFET +YY TVIDAPGHRDFIKNMITGTSQADCA+LII + TG FEAGISKDGQTRE
Sbjct:    1 MGKEDKTHINVVVIGHVDSGKSTTTGHLIYQCGGIDKRTIEKFEKEAAELGKGSFKYAWVLDKLKAERERGITIDIALWKFETPKYYVTVIDAPGHRDFIKNMITGTSQADCAILIIAAGTGEFEAGISKDGQTRE 136
[Close]
BLAST of DN617643 vs. ExPASy Swiss-Prot
Match: EF1A_ONCVO (Elongation factor 1-alpha OS=Onchocerca volvulus PE=2 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 2.190e-63
Identity = 117/135 (86.67%), Postives = 123/135 (91.11%), Query Frame = 2 
Query:   56 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTRE 460
            MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLDKLKAERERGI IDIALWKFET +YY T+IDAPGHRDFIKNMITGTSQADCAVL++   TG FEAGISK+GQTRE
Sbjct:    1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGIQIDIALWKFETPKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTRE 135
[Close]
BLAST of DN617643 vs. ExPASy Swiss-Prot
Match: EF1A_SORMA (Elongation factor 1-alpha OS=Sordaria macrospora GN=TEF PE=3 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 2.861e-63
Identity = 119/136 (87.50%), Postives = 125/136 (91.91%), Query Frame = 2 
Query:   56 MGKE-KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTRE 460
            MGKE K HIN+VVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEAAE+ K SFKYAWVLDKLKAERERGITIDIALWKFET +YY TVIDAPGHRDFIKNMITGTSQADCA+LII + TG FEAGISKDGQTRE
Sbjct:    1 MGKEDKAHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAELGKGSFKYAWVLDKLKAERERGITIDIALWKFETPKYYVTVIDAPGHRDFIKNMITGTSQADCAILIIAAGTGEFEAGISKDGQTRE 136
[Close]
BLAST of DN617643 vs. ExPASy Swiss-Prot
Match: EF1A_ARTSA (Elongation factor 1-alpha OS=Artemia salina PE=1 SV=2)

HSP 1 Score: 240.35 bits (612), Expect = 2.861e-63
Identity = 117/135 (86.67%), Postives = 123/135 (91.11%), Query Frame = 2 
Query:   56 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTRE 460
            MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLDKLKAERERGITIDIALWKFET +YY T+IDAPGHRDFIKNMITGTSQADCAVLI+ +  G FEAGISK+GQTRE
Sbjct:    1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGVGEFEAGISKNGQTRE 135
[Close]
BLAST of DN617643 vs. ExPASy Swiss-Prot
Match: EF1A_YEAST (Elongation factor 1-alpha OS=Saccharomyces cerevisiae GN=TEF1 PE=1 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 3.736e-63
Identity = 117/135 (86.67%), Postives = 123/135 (91.11%), Query Frame = 2 
Query:   56 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTRE 460
            MGKEK+HIN+VVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEAAE+ K SFKYAWVLDKLKAERERGITIDIALWKFET +Y  TVIDAPGHRDFIKNMITGTSQADCA+LII    G FEAGISKDGQTRE
Sbjct:    1 MGKEKSHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAELGKGSFKYAWVLDKLKAERERGITIDIALWKFETPKYQVTVIDAPGHRDFIKNMITGTSQADCAILIIAGGVGEFEAGISKDGQTRE 135
[Close]
BLAST of DN617643 vs. ExPASy Swiss-Prot
Match: EF1A_APIME (Elongation factor 1-alpha OS=Apis mellifera PE=3 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 3.736e-63
Identity = 117/135 (86.67%), Postives = 123/135 (91.11%), Query Frame = 2 
Query:   56 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTRE 460
            MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLDKLKAERERGITIDIALWKFET +YY T+IDAPGHRDFIKNMITGTSQADCAVLI+ +  G FEAGISK+GQTRE
Sbjct:    1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGIGEFEAGISKNGQTRE 135
The following BLAST results are available for this feature:
BLAST of DN617643 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EF1A1_RHIRA9.833e-6487.41Elongation factor 1-alpha OS=Rhizomucor racemosus ... [more]
EF1A_CAEEL1.284e-6386.67Elongation factor 1-alpha OS=Caenorhabditis elegan... [more]
EF1A_ORYLA1.677e-6386.67Elongation factor 1-alpha OS=Oryzias latipes GN=ee... [more]
EF1A_AURPU1.677e-6386.67Elongation factor 1-alpha OS=Aureobasidium pullula... [more]
EF1A_TRIRE2.190e-6387.50Elongation factor 1-alpha OS=Trichoderma reesei GN... [more]
EF1A_ONCVO2.190e-6386.67Elongation factor 1-alpha OS=Onchocerca volvulus P... [more]
EF1A_SORMA2.861e-6387.50Elongation factor 1-alpha OS=Sordaria macrospora G... [more]
EF1A_ARTSA2.861e-6386.67Elongation factor 1-alpha OS=Artemia salina PE=1 S... [more]
EF1A_YEAST3.736e-6386.67Elongation factor 1-alpha OS=Saccharomyces cerevis... [more]
EF1A_APIME3.736e-6386.67Elongation factor 1-alpha OS=Apis mellifera PE=3 S... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01H21_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001H21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617643 ID=DN617643; Name=DN617643; organism=Citrus sinensis; type=EST; length=462bp
GAGAGAACCATTTTCGCGAATATCATTTTAATAAGGTTTTTTCTAGATTT
GCATAATGGGTAAGGAGAAGACTCACATCAACATTGTGGTCATCGGCCAT
GTCGACTCTGGAAAGTCGACCACCACCGGACACTTGATCTACAAGCTTGG
TGGTATTGACAAGCGTGTGATCGAGAGGTTCGAGAAGGAAGCTGCTGAGA
TGAACAAGAGGTCATTCAAATACGCCTGGGTGCTCGACAAGCTCAAGGCT
GAGCGTGAACGTGGTATTACCATTGATATTGCCTTGTGGAAGTTCGAGAC
CACCAGGTACTACTGCACCGTCATTGATGCTCCTGGACATCGTGACTTTA
TCAAGAACATGATTACCGGTACCTCACAGGCTGACTGTGCCGTCCTTATC
ATTGACTCTACCACCGGTGGTTTTGAAGCTGGTATCTCCAAGGATGGTCA
GACTCGTGAGCA
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