DN617641
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617641 vs. ExPASy Swiss-Prot
Match: ATL3K_ARATH (RING-H2 finger protein ATL3K OS=Arabidopsis thaliana GN=ATL3K PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.112e-11 Identity = 40/107 (37.38%), Postives = 57/107 (53.27%), Query Frame = 2 Query: 389 PPIIFATQEDFFDEDHGPVLDHPIWYINTIGLPQSVIDSIAVFKYKKDVGLI---------EG--TDCSVCLSEFQEDESLRLLPKCSHAFHISCIDTWLKVAYKLP 676 P IIF ++D D + G V+ GL SVI+S F + KD+ + EG T CS+CL E+ E+E LR++P+C H FH+ C+D WLK+ P Sbjct: 79 PRIIFVAEDD--DLESGNVV--------VGGLDHSVINSYPKFHFTKDITAVVNGDGFHDGEGRETTCSICLCEYMEEEMLRMMPECKHYFHVYCLDAWLKLNGSCP 175
BLAST of DN617641 vs. ExPASy Swiss-Prot
Match: ATL4C_ARATH (Putative RING-H2 finger protein ATL4C OS=Arabidopsis thaliana GN=ATL4C PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.144e-11 Identity = 30/62 (48.39%), Postives = 41/62 (66.13%), Query Frame = 2 Query: 479 GLPQSVIDSIAVFKYKKDVGLI---EGTDCSVCLSEFQEDESLRLLPKCSHAFHISCIDTWL 655 GL + VI+S F Y + GL G +C++CLSEF++ E+LR +P CSH FH +CID WL Sbjct: 94 GLEKEVIESFPTFLYSEVKGLKIGKGGVECAICLSEFEDQETLRWMPPCSHTFHANCIDVWL 155
BLAST of DN617641 vs. ExPASy Swiss-Prot
Match: ATL3L_ARATH (RING-H2 finger protein ATL3L OS=Arabidopsis thaliana GN=ATL3L PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.144e-11 Identity = 29/65 (44.62%), Postives = 39/65 (60.00%), Query Frame = 2 Query: 482 LPQSVIDSIAVFKYKKDVGLIEGTDCSVCLSEFQEDESLRLLPKCSHAFHISCIDTWLKVAYKLP 676 L +V++ I +F Y +CSVCLSEF+ED+ R+LPKC H FH+ CIDTW + P Sbjct: 88 LDPTVLEKIPIFVYSVKTHESPLEECSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFRSRSSCP 152
BLAST of DN617641 vs. ExPASy Swiss-Prot
Match: ATL1C_ARATH (RING-H2 finger protein ATL1C OS=Arabidopsis thaliana GN=ATL1C PE=1 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 6.473e-11 Identity = 30/63 (47.62%), Postives = 40/63 (63.49%), Query Frame = 2 Query: 479 GLPQSVIDSIAVFKYKKDVGLI---EGTDCSVCLSEFQEDESLRLLPKCSHAFHISCIDTWLK 658 GL SVI++ F Y L E +C VCL+EF++DE+LRL+P+C H FH CID WL+ Sbjct: 89 GLDASVIETFPTFPYSTVKTLRIGKEALECPVCLNEFEDDETLRLIPQCCHVFHPGCIDAWLR 151 HSP 2 Score: 21.1718 bits (43), Expect = 6.473e-11 Identity = 7/9 (77.78%), Postives = 7/9 (77.78%), Query Frame = 3 Query: 657 RSHTNCPLC 683 RS T CPLC Sbjct: 151 RSQTTCPLC 159 The following BLAST results are available for this feature:
BLAST of DN617641 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DN617641 ID=DN617641; Name=DN617641; organism=Citrus sinensis; type=EST; length=684bpback to top |