DN617635

Overview
NameDN617635
Unique NameDN617635
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length398
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617635 vs. ExPASy Swiss-Prot
Match: PPIA_STRCH (Peptidyl-prolyl cis-trans isomerase A OS=Streptomyces chrysomallus GN=ppiA PE=1 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 1.214e-29
Identity = 68/116 (58.62%), Postives = 74/116 (63.79%), Query Frame = 2
Query:   50 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFF 397
            KV+FD+T+   PAGRI   LF DV P+TAENFRAL TGEKG G       Y GSSFHRVI  FM Q            +SIYG KFADENF  KH   G+LSMANAG  TNGS FF
Sbjct:    4 KVYFDITIDDAPAGRITFNLFDDVVPKTAENFRALATGEKGFG-------YAGSSFHRVITDFMLQGGDFTRGDGTGGKSIYGEKFADENFQLKHDRVGLLSMANAGKNTNGSQFF 112          
BLAST of DN617635 vs. ExPASy Swiss-Prot
Match: PPIH_RHIOR (Peptidyl-prolyl cis-trans isomerase H OS=Rhizopus oryzae GN=cyp7 PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 2.071e-29
Identity = 64/123 (52.03%), Postives = 81/123 (65.85%), Query Frame = 2
Query:   32 SKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIY-GSKFADENFVKKHTGPGILSMANAGPGTNGSHFF 397
            +++  P VFFD+++G  P GR+ MELF+D+ PRTAENFR LCTGE    ++G P  YK   FHRVI  FM Q              IY G +FADENF++KHTG G+LSMAN+GP +NG  FF
Sbjct:    6 NQVERPVVFFDISIGDVPVGRMKMELFSDIVPRTAENFRQLCTGE--YKRNGVPQGYKNCLFHRVIKDFMVQGGDFIKGDGTGAMCIYGGDRFADENFIEKHTGAGLLSMANSGPNSNGCQFF 126          
BLAST of DN617635 vs. ExPASy Swiss-Prot
Match: PPIB_ARTBE (Peptidyl-prolyl cis-trans isomerase B OS=Arthroderma benhamiae GN=CPR2 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 3.533e-29
Identity = 69/133 (51.88%), Postives = 82/133 (61.65%), Query Frame = 2
Query:    5 FVFFSPINQSKMPN--PKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFF 397
            F+F     ++K P    KV+FD+   GQP GRIVM L+    P+TAENFRAL TGEKG G       Y+GS+FHRVI  FM Q            +SIYG+KF DENF  +HT  G+LSMANAG  TNGS FF
Sbjct:   19 FLFMGQTVEAKGPKITSKVYFDIEHDGQPLGRIVMGLYGKTVPKTAENFRALATGEKGFG-------YEGSTFHRVIKDFMIQGGDFTNGDGTGGKSIYGNKFEDENFKLRHTKKGVLSMANAGKDTNGSQFF 144          
BLAST of DN617635 vs. ExPASy Swiss-Prot
Match: PPIB_ORPSP (Peptidyl-prolyl cis-trans isomerase B OS=Orpinomyces sp. (strain PC-2) GN=CYPB PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 7.870e-29
Identity = 65/116 (56.03%), Postives = 75/116 (64.66%), Query Frame = 2
Query:   50 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFF 397
            KV+FD+  G +  GRIV+ L+ +V P+T ENFRAL TGEKG G       YK S FHRVI  FM Q            +SIYG +FADENF  +HTGPGILSMANAG  TNGS FF
Sbjct:   31 KVYFDIKQGDKDLGRIVLGLYGEVVPKTVENFRALATGEKGYG-------YKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFADENFKLRHTGPGILSMANAGRDTNGSQFF 139          
BLAST of DN617635 vs. ExPASy Swiss-Prot
Match: PPIB_ASPFU (Peptidyl-prolyl cis-trans isomerase B OS=Aspergillus fumigatus GN=cpr2 PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 1.753e-28
Identity = 65/116 (56.03%), Postives = 75/116 (64.66%), Query Frame = 2
Query:   50 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFF 397
            KVFFD+  G +P GRIV+ L+    P+TAENFRAL TGEKG G       Y+GS+FHRVI  FM Q            +SIYG KFADENF  +HT  G+LSMANAG  TNGS FF
Sbjct:   37 KVFFDIEHGDKPLGRIVLGLYGKTVPKTAENFRALATGEKGFG-------YEGSTFHRVIKSFMIQGGDFTRGDGTGGKSIYGEKFADENFKLRHTRKGLLSMANAGKDTNGSQFF 145          
BLAST of DN617635 vs. ExPASy Swiss-Prot
Match: PPIB_GIBZE (Peptidyl-prolyl cis-trans isomerase B OS=Gibberella zeae GN=CPR2 PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 2.991e-28
Identity = 64/116 (55.17%), Postives = 73/116 (62.93%), Query Frame = 2
Query:   50 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFF 397
            KV+FD+T G QP GR+VM L+    P T ENFRAL TGEKG G       Y+GS+FHRVI  FM Q            +SIYG +F DENF  KHT  G+LSMANAG  TNGS FF
Sbjct:   36 KVYFDITQGDQPLGRVVMGLYGKTVPETTENFRALATGEKGFG-------YEGSAFHRVIKNFMIQGGDFTKGDGTGGKSIYGDRFKDENFKLKHTKKGLLSMANAGRDTNGSQFF 144          
BLAST of DN617635 vs. ExPASy Swiss-Prot
Match: PPIB_ASPNG (Peptidyl-prolyl cis-trans isomerase B OS=Aspergillus niger GN=cypB PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 2.991e-28
Identity = 64/116 (55.17%), Postives = 75/116 (64.66%), Query Frame = 2
Query:   50 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFF 397
            KVFFD+  G +P GR+V+ L+    P+TAENFRAL TGEKG G       Y+GS+FHRVI  FM Q            +SIYG KFADENF  +HT  G+LSMANAG  TNGS FF
Sbjct:   36 KVFFDIEHGDKPLGRVVLGLYGKTVPKTAENFRALATGEKGFG-------YEGSTFHRVIKDFMIQGGDFTRGDGTGGKSIYGEKFADENFKLRHTRKGLLSMANAGKDTNGSQFF 144          
BLAST of DN617635 vs. ExPASy Swiss-Prot
Match: NKTR_MOUSE (NK-tumor recognition protein OS=Mus musculus GN=Nktr PE=1 SV=3)

HSP 1 Score: 123.25 bits (308), Expect = 3.906e-28
Identity = 60/118 (50.85%), Postives = 77/118 (65.25%), Query Frame = 2
Query:   47 PKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKS-GKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFF 397
            P+  FD+ +  +P GRI+ +LF+D+ P+T +NF  LC+GEKG+GK+ GK L YKGS+FHRV+  FM Q            ESIYG  F DENF+ KH    +LSMAN G  TNGS FF
Sbjct:    7 PQCHFDIEINREPVGRIMFQLFSDICPKTCKNFLCLCSGEKGLGKTTGKKLCYKGSTFHRVVKNFMIQGGDFSEGNGKGGESIYGGYFKDENFILKHDRAFLLSMANRGKHTNGSQFF 124          
BLAST of DN617635 vs. ExPASy Swiss-Prot
Match: NKTR_HUMAN (NK-tumor recognition protein OS=Homo sapiens GN=NKTR PE=1 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 3.906e-28
Identity = 60/118 (50.85%), Postives = 77/118 (65.25%), Query Frame = 2
Query:   47 PKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKS-GKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFF 397
            P+  FD+ +  +P GRI+ +LF+D+ P+T +NF  LC+GEKG+GK+ GK L YKGS+FHRV+  FM Q            ESIYG  F DENF+ KH    +LSMAN G  TNGS FF
Sbjct:    7 PQCHFDIEINREPVGRIMFQLFSDICPKTCKNFLCLCSGEKGLGKTTGKKLCYKGSTFHRVVKNFMIQGGDFSEGNGKGGESIYGGYFKDENFILKHDRAFLLSMANRGKHTNGSQFF 124          
BLAST of DN617635 vs. ExPASy Swiss-Prot
Match: PPIB_YARLI (Peptidyl-prolyl cis-trans isomerase B OS=Yarrowia lipolytica GN=CPR2 PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 5.101e-28
Identity = 66/116 (56.90%), Postives = 72/116 (62.07%), Query Frame = 2
Query:   50 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFF 397
            KV+FD+  G +  G+IVM L+ DV P+T ENFRALCTGE G G       YKGS FHRVI  FM Q            ESIYG KF DENF  KHT P  LSMANAG  TNGS FF
Sbjct:   33 KVYFDIKQGEESLGKIVMGLYGDVVPKTVENFRALCTGETGKG-------YKGSKFHRVIKNFMIQGGDFTRGDGTGGESIYGRKFPDENFQLKHTKPYKLSMANAGRDTNGSQFF 141          
The following BLAST results are available for this feature:
BLAST of DN617635 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190
Match NameE-valueIdentityDescription
PPIA_STRCH1.214e-2958.62Peptidyl-prolyl cis-trans isomerase A OS=Streptomy... [more]
PPIH_RHIOR2.071e-2952.03Peptidyl-prolyl cis-trans isomerase H OS=Rhizopus ... [more]
PPIB_ARTBE3.533e-2951.88Peptidyl-prolyl cis-trans isomerase B OS=Arthroder... [more]
PPIB_ORPSP7.870e-2956.03Peptidyl-prolyl cis-trans isomerase B OS=Orpinomyc... [more]
PPIB_ASPFU1.753e-2856.03Peptidyl-prolyl cis-trans isomerase B OS=Aspergill... [more]
PPIB_GIBZE2.991e-2855.17Peptidyl-prolyl cis-trans isomerase B OS=Gibberell... [more]
PPIB_ASPNG2.991e-2855.17Peptidyl-prolyl cis-trans isomerase B OS=Aspergill... [more]
NKTR_MOUSE3.906e-2850.85NK-tumor recognition protein OS=Mus musculus GN=Nk... [more]
NKTR_HUMAN3.906e-2850.85NK-tumor recognition protein OS=Homo sapiens GN=NK... [more]
PPIB_YARLI5.101e-2856.90Peptidyl-prolyl cis-trans isomerase B OS=Yarrowia ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01H17_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001H17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617635 ID=DN617635; Name=DN617635; organism=Citrus sinensis; type=EST; length=398bp
TTAGTTTGTTTTTTTCTCTCCAATCAACCAATCAAAAATGCCAAACCCCA
AAGTGTTCTTCGACATGACCGTCGGCGGTCAGCCGGCCGGCAGGATCGTG
ATGGAGCTCTTCGCCGATGTCACCCCCCGAACCGCCGAGAACTTCCGCGC
CCTCTGCACCGGCGAGAAAGGCGTCGGCAAGTCCGGCAAGCCTCTCCACT
ACAAAGGCTCGTCCTTCCACCGTGTGATCCCCGGATTCATGTGCCAGGGG
GGAGACTTCACCGCCGGAAACGGAACCGGAGGCGAATCAATCTACGGCTC
GAAATTCGCCGATGAGAACTTCGTGAAGAAGCACACCGGCCCCGGAATCC
TCTCCATGGCGAATGCCGGACCCGGAACCAACGGATCTCATTTCTTCG
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