DN617635

Overview
NameDN617635
Unique NameDN617635
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length398
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617635 vs. ExPASy Swiss-Prot
Match: PPID_USTMA (Peptidyl-prolyl cis-trans isomerase D OS=Ustilago maydis GN=CPR6 PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 8.701e-28
Identity = 64/126 (50.79%), Postives = 75/126 (59.52%), Query Frame = 2
Query:   35 KMPNPKVFFDMTVGGQPAGR-----IVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFF 397
            K  NP V+ D+  G  PA R     IV+EL+AD  PRTAENFR LCT    +  +G+PL ++ S FHRVIP FM Q            ESIYG KF DE+   KH  P +LSMANAG  TNGS FF
Sbjct:    9 KPGNPIVYLDLAFGSSPASRPGSNRIVLELYADRVPRTAENFRVLCTNTSKLASTGQPLSFRNSIFHRVIPKFMIQGGDFTRADGTGGESIYGEKFQDEDLTGKHDVPFLLSMANAGANTNGSQFF 134          
BLAST of DN617635 vs. ExPASy Swiss-Prot
Match: PPIB_NEUCR (Peptidyl-prolyl cis-trans isomerase B OS=Neurospora crassa GN=cpr-2 PE=3 SV=3)

HSP 1 Score: 121.709 bits (304), Expect = 1.136e-27
Identity = 64/116 (55.17%), Postives = 74/116 (63.79%), Query Frame = 2
Query:   50 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFF 397
            KV+FD+  G +P GRIVM L+    P+TAENFRAL TGEKG G       Y+GS+FHRVI  FM Q            +SIYG KF DENF  KH+  G+LSMANAG  TNGS FF
Sbjct:   36 KVYFDIEQGDKPLGRIVMGLYGKTVPKTAENFRALATGEKGFG-------YEGSTFHRVIKQFMIQGGDFTKGDGTGGKSIYGDKFPDENFKLKHSKKGLLSMANAGKDTNGSQFF 144          
BLAST of DN617635 vs. ExPASy Swiss-Prot
Match: PPIB_SCHPO (Peptidyl-prolyl cis-trans isomerase B OS=Schizosaccharomyces pombe GN=cyp4 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.484e-27
Identity = 65/132 (49.24%), Postives = 80/132 (60.61%), Query Frame = 2
Query:    8 VFFSPINQSKMPN--PKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFF 397
            +FF  I+ ++ P     V+FD+  G +  GR+ + LF    P+TAENFRAL TGEKG G       Y+GS FHRVIP FM Q            +SIYGS+F DENF   H  PG+LSMANAGP +NGS FF
Sbjct:   12 LFFGLISANRGPKVTDTVYFDLQQGDEFLGRVTIGLFGKTVPKTAENFRALATGEKGFG-------YEGSIFHRVIPNFMIQGGDITKGDGTGGKSIYGSRFPDENFKLSHQRPGLLSMANAGPDSNGSQFF 136          
BLAST of DN617635 vs. ExPASy Swiss-Prot
Match: CYPH_NEUCR (Peptidyl-prolyl cis-trans isomerase, mitochondrial OS=Neurospora crassa GN=NCU00726 PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.484e-27
Identity = 66/130 (50.77%), Postives = 75/130 (57.69%), Query Frame = 2
Query:   50 KVFFDMTVGGQ--------------PAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFF 397
            KVFFD+   G                +GRI   L+ DV P+TA NF+ LCTG+ G G       YKGSSFHR+IP FM Q            +SIYG KFADENF KKH  PG+LSMANAGP TNGS FF
Sbjct:   46 KVFFDLEWEGPVLGPNNKPTSEIKAQSGRINFTLYDDVVPKTARNFKELCTGQNGFG-------YKGSSFHRIIPEFMLQGGDFTRGNGTGGKSIYGEKFADENFAKKHVRPGLLSMANAGPNTNGSQFF 168          
BLAST of DN617635 vs. ExPASy Swiss-Prot
Match: PPIA_PARPR (Peptidyl-prolyl cis-trans isomerase OS=Paramecium primaurelia PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 2.532e-27
Identity = 63/115 (54.78%), Postives = 71/115 (61.74%), Query Frame = 2
Query:   53 VFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFF 397
            VFFD+  GG    +IV +L+ DV P+TA NFR L TG +G G       YKGS FHRVI  FM Q            +SIYG KFADENF  KHT P +LSMANAGP TNGS FF
Sbjct:    4 VFFDVQFGGDAPKKIVFKLYDDVVPKTAANFRELATGSRGFG-------YKGSVFHRVITDFMAQGGDFTNFNGTGGKSIYGEKFADENFKLKHTKPALLSMANAGPNTNGSQFF 111          
BLAST of DN617635 vs. ExPASy Swiss-Prot
Match: PPIB_CHICK (Peptidyl-prolyl cis-trans isomerase B OS=Gallus gallus GN=PPIB PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 4.318e-27
Identity = 63/116 (54.31%), Postives = 72/116 (62.07%), Query Frame = 2
Query:   50 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFF 397
            KVFFD+ VG + AGR+V+ LF    P+T ENF AL TGEKG G       +KGS FHRVI  FM Q            +SIYG +F DENF  KH GPG +SMANAG  TNGS FF
Sbjct:   36 KVFFDLRVGEEDAGRVVIGLFGKTVPKTVENFVALATGEKGFG-------FKGSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGDRFPDENFKLKHYGPGWVSMANAGKDTNGSQFF 144          
BLAST of DN617635 vs. ExPASy Swiss-Prot
Match: PPIB2_RHIOR (Peptidyl-prolyl cis-trans isomerase B2 OS=Rhizopus oryzae GN=cyp9 PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 7.366e-27
Identity = 62/131 (47.33%), Postives = 79/131 (60.31%), Query Frame = 2
Query:    5 FVFFSPINQSKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFF 397
            F F S  ++  +   K++FD+  G +  GRIV  L+    P+TAENF+ L TG+ G G       YKGS+FHRVI  FM Q            +SIYGS+F DENF  +HT PG+LSMANAGP +NGS FF
Sbjct:   20 FRFVSAESKGPVITDKIYFDIKQGEESLGRIVFGLYGKTVPKTAENFKQLATGQNGYG-------YKGSTFHRVIDQFMIQGGDFTNHDGTGGKSIYGSRFPDENFKLRHTVPGLLSMANAGPDSNGSQFF 143          
BLAST of DN617635 vs. ExPASy Swiss-Prot
Match: PPIB1_RHIOR (Peptidyl-prolyl cis-trans isomerase B1 OS=Rhizopus oryzae GN=cyp8 PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 7.366e-27
Identity = 62/131 (47.33%), Postives = 79/131 (60.31%), Query Frame = 2
Query:    5 FVFFSPINQSKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFF 397
            F F S   +  +   K++FD+  G +  GRIV+ L+    P+TAENF+ L TGE G G       YKGS+FHRVI  FM Q            +SIYG++FADENF  +H+ PG+LSMANAG  TNGS FF
Sbjct:   20 FSFVSAEGRGPVITDKIYFDIKQGDESLGRIVLGLYGKTVPKTAENFKQLATGENGYG-------YKGSTFHRVIKKFMIQGGDFTNHDGTGGKSIYGNRFADENFKLRHSTPGLLSMANAGRDTNGSQFF 143          
BLAST of DN617635 vs. ExPASy Swiss-Prot
Match: CYPH_UROFA (Peptidyl-prolyl cis-trans isomerase OS=Uromyces fabae GN=PIG28 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 7.366e-27
Identity = 62/114 (54.39%), Postives = 69/114 (60.53%), Query Frame = 2
Query:   56 FFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFF 397
            +FD++  G+P GRIV EL+ DV PRT  NFR LC    G G       +K S FHRVIP FM Q            ESIYG KF DENF KKH   G+LSMANAGP TNGS FF
Sbjct:    5 YFDVSSNGKPLGRIVFELYDDVVPRTTNNFRQLCLNPPGKG-------FKHSIFHRVIPDFMIQGGDFTNGNGTGGESIYGKKFEDENFQKKHVERGMLSMANAGPNTNGSQFF 111          
BLAST of DN617635 vs. ExPASy Swiss-Prot
Match: CYP8_CAEEL (Peptidyl-prolyl cis-trans isomerase 8 OS=Caenorhabditis elegans GN=cyn-8 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 9.620e-27
Identity = 62/118 (52.54%), Postives = 71/118 (60.17%), Query Frame = 2
Query:   44 NPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFF 397
            N + FFD+++ G+PAGRIV  L+    PRT ENFRA CTGE G   +G    Y+GS FHRVI GFM Q             SIYG  F DEN   KH  P +LSMAN GP TNGS FF
Sbjct:    8 NKRAFFDISINGEPAGRIVFSLWNHCCPRTVENFRAFCTGELGK-MNGHYASYQGSVFHRVIKGFMIQGGDITHGNGTGGYSIYGRTFDDENLALKHKKPYLLSMANRGPDTNGSQFF 124          
The following BLAST results are available for this feature:
BLAST of DN617635 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190
Match NameE-valueIdentityDescription
PPID_USTMA8.701e-2850.79Peptidyl-prolyl cis-trans isomerase D OS=Ustilago ... [more]
PPIB_NEUCR1.136e-2755.17Peptidyl-prolyl cis-trans isomerase B OS=Neurospor... [more]
PPIB_SCHPO1.484e-2749.24Peptidyl-prolyl cis-trans isomerase B OS=Schizosac... [more]
CYPH_NEUCR1.484e-2750.77Peptidyl-prolyl cis-trans isomerase, mitochondrial... [more]
PPIA_PARPR2.532e-2754.78Peptidyl-prolyl cis-trans isomerase OS=Paramecium ... [more]
PPIB_CHICK4.318e-2754.31Peptidyl-prolyl cis-trans isomerase B OS=Gallus ga... [more]
PPIB2_RHIOR7.366e-2747.33Peptidyl-prolyl cis-trans isomerase B2 OS=Rhizopus... [more]
PPIB1_RHIOR7.366e-2747.33Peptidyl-prolyl cis-trans isomerase B1 OS=Rhizopus... [more]
CYPH_UROFA7.366e-2754.39Peptidyl-prolyl cis-trans isomerase OS=Uromyces fa... [more]
CYP8_CAEEL9.620e-2752.54Peptidyl-prolyl cis-trans isomerase 8 OS=Caenorhab... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01H17_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001H17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617635 ID=DN617635; Name=DN617635; organism=Citrus sinensis; type=EST; length=398bp
TTAGTTTGTTTTTTTCTCTCCAATCAACCAATCAAAAATGCCAAACCCCA
AAGTGTTCTTCGACATGACCGTCGGCGGTCAGCCGGCCGGCAGGATCGTG
ATGGAGCTCTTCGCCGATGTCACCCCCCGAACCGCCGAGAACTTCCGCGC
CCTCTGCACCGGCGAGAAAGGCGTCGGCAAGTCCGGCAAGCCTCTCCACT
ACAAAGGCTCGTCCTTCCACCGTGTGATCCCCGGATTCATGTGCCAGGGG
GGAGACTTCACCGCCGGAAACGGAACCGGAGGCGAATCAATCTACGGCTC
GAAATTCGCCGATGAGAACTTCGTGAAGAAGCACACCGGCCCCGGAATCC
TCTCCATGGCGAATGCCGGACCCGGAACCAACGGATCTCATTTCTTCG
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