DN617635

Overview
NameDN617635
Unique NameDN617635
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length398
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617635 vs. ExPASy Swiss-Prot
Match: PPIL2_ARATH (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Arabidopsis thaliana GN=PUB49 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.033e-12
Identity = 45/104 (43.27%), Postives = 56/104 (53.85%), Query Frame = 2
Query:   89 GRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADE-NFVKKHTGPGILSMANAGPGTNGSHFF 397
            G + +EL  D+ PR  ENF  LC  E+G        +Y G +FHR I  FM Q            ESI+G  F DE N    H+G G++SMAN+GP TNGS FF
Sbjct:  353 GDLNIELHCDIAPRACENFITLC--ERG--------YYNGVAFHRSIRNFMIQGGDPTGTGKGG-ESIWGKPFKDEPNSKLLHSGRGVVSMANSGPHTNGSQFF 445          
BLAST of DN617635 vs. ExPASy Swiss-Prot
Match: PPIL1_NEUCR (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Neurospora crassa GN=cyp-1 PE=3 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 1.033e-12
Identity = 44/104 (42.31%), Postives = 55/104 (52.88%), Query Frame = 2
Query:   89 GRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSHFF 397
            G   +EL+ +  P+T +NF  L   ++G        +Y  + FHR+I  FM Q             SIYG KF DE     KHTG G+LSMANAGP TNGS FF
Sbjct:   12 GTFTLELYTNHAPKTCKNFATLA--DRG--------YYDSTVFHRIIKDFMIQGGDPTGTGRGG-SSIYGEKFEDEIHPGLKHTGAGVLSMANAGPNTNGSQFF 104          
BLAST of DN617635 vs. ExPASy Swiss-Prot
Match: PPIB_TREPA (Probable peptidyl-prolyl cis-trans isomerase OS=Treponema pallidum GN=ppiB PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.033e-12
Identity = 47/104 (45.19%), Postives = 56/104 (53.85%), Query Frame = 2
Query:   89 GRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADE-NFVKKHTGPGILSMANAGPGTNGSHFF 397
            G IV+ LF +  P T  NF  L  G   V K G+P  Y+G +FHRVI  FM Q                G +F DE +   +H  PG+LSMANAGPGTNGS FF
Sbjct:   49 GTIVLSLFFEKAPLTVCNFVGLAEGTLAVCK-GRPF-YQGLTFHRVIKDFMIQGGDPQGNGTGGP----GYQFPDECDPALRHDSPGVLSMANAGPGTNGSQFF 146          
BLAST of DN617635 vs. ExPASy Swiss-Prot
Match: PPIL1_ASPNG (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspergillus niger GN=cypC PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.349e-12
Identity = 45/104 (43.27%), Postives = 54/104 (51.92%), Query Frame = 2
Query:   89 GRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADE-NFVKKHTGPGILSMANAGPGTNGSHFF 397
            G   +EL+    P+T +NF  L   ++G        +Y    FHR+IP FM Q             SIYG KF DE N   KHTG GILSMAN+GP  NGS FF
Sbjct:   12 GSFTVELYNAHAPKTCKNFATLA--QRG--------YYNNVIFHRIIPNFMVQTGDPTGTGRGG-SSIYGEKFEDEINPNLKHTGAGILSMANSGPNNNGSQFF 104          
BLAST of DN617635 vs. ExPASy Swiss-Prot
Match: CYP7_YEAST (Peptidyl-prolyl cis-trans isomerase CYP7 OS=Saccharomyces cerevisiae GN=CPR7 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.349e-12
Identity = 49/143 (34.27%), Postives = 64/143 (44.76%), Query Frame = 2
Query:   44 NPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGE-KGVGKSGKPLHYKGSSFHRVIPGFM-----------------------CQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAG-PGTNGSHFF 397
            +P V+ D+++  +P GRIV +LF +  P+T ENF  LC G+ K   K  + L YKG+ FHRV+  FM                       C             ES     F DEN + +   P  L MAN G P TN S FF
Sbjct:    4 DPLVYLDISIDKKPIGRIVCKLFREKAPKTTENFYKLCAGDVKSPLKDQQYLSYKGNGFHRVVKNFMIQAGDIVFGTQKDSSSSSVGKGGCSIYADKEEVKTDDESFCYGNFEDEN-LGEFVEPFTLGMANLGSPNTNNSQFF 145          
BLAST of DN617635 vs. ExPASy Swiss-Prot
Match: PPIL3_MOUSE (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Mus musculus GN=Ppil3 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.300e-12
Identity = 44/104 (42.31%), Postives = 53/104 (50.96%), Query Frame = 2
Query:   89 GRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADE-NFVKKHTGPGILSMANAGPGTNGSHFF 397
            G I +E+F + TP+T ENF ALC             +Y G  FHR I GFM Q             SI+  KF DE +   KH   G++SMAN GP TNGS FF
Sbjct:   10 GDIKIEVFCERTPKTCENFLALCASN----------YYNGCVFHRNIKGFMVQTGDPTGTGRGG-SSIWAKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFF 102          
BLAST of DN617635 vs. ExPASy Swiss-Prot
Match: PPIL1_CRYNE (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Cryptococcus neoformans GN=CYP1 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.300e-12
Identity = 49/121 (40.50%), Postives = 62/121 (51.24%), Query Frame = 2
Query:   41 PNPK-VFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSHFF 397
            P+P  V FD +VG        +EL+    P+T  NF  L   E+G        +Y G  FHR+IP FM Q             SIYG +FADE   + +  G GIL+MAN+GP TNGS FF
Sbjct:    4 PSPTYVTFDTSVGS-----FTVELYTAHAPKTCNNFAKLA--ERG--------YYNGVIFHRIIPNFMIQGGDPTGTGRGGT-SIYGDRFADEIHPELRFVGAGILAMANSGPNTNGSQFF 108          
BLAST of DN617635 vs. ExPASy Swiss-Prot
Match: PPI1_STAES (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=SE_0648 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.125e-12
Identity = 45/103 (43.69%), Postives = 54/103 (52.43%), Query Frame = 2
Query:   89 GRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFF 397
            G +  +LF D+ P+T ENF           K+G   +Y G +FHRVI  FM Q            ESIYGS F DE  ++     G LSMANAGP TNGS FF
Sbjct:   25 GDMTFKLFPDIAPKTVENFVTH-------SKNG---YYDGVTFHRVINDFMVQGGDPTATGMGG-ESIYGSAFEDEFSLEAFNLYGALSMANAGPNTNGSQFF 116          
BLAST of DN617635 vs. ExPASy Swiss-Prot
Match: PPI1_STAEQ (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=SERP0540 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.125e-12
Identity = 45/103 (43.69%), Postives = 54/103 (52.43%), Query Frame = 2
Query:   89 GRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFF 397
            G +  +LF D+ P+T ENF           K+G   +Y G +FHRVI  FM Q            ESIYGS F DE  ++     G LSMANAGP TNGS FF
Sbjct:   25 GDMTFKLFPDIAPKTVENFVTH-------SKNG---YYDGVTFHRVINDFMVQGGDPTATGMGG-ESIYGSAFEDEFSLEAFNLYGALSMANAGPNTNGSQFF 116          
BLAST of DN617635 vs. ExPASy Swiss-Prot
Match: PPIL1_MOUSE (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Mus musculus GN=Ppil1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 8.742e-12
Identity = 47/118 (39.83%), Postives = 61/118 (51.69%), Query Frame = 2
Query:   47 PKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSHFF 397
            P V+ + ++G      IV+EL+    P+T +NF  L    +G        +Y G+ FHR+I  FM Q             SIYG +F DE     K TG GIL+MANAGP TNGS FF
Sbjct:   12 PNVYLETSMGV-----IVLELYWKHAPKTCKNFAELA--RRG--------YYNGTKFHRIIKDFMIQGGDPTGTGRGGA-SIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFF 113          
The following BLAST results are available for this feature:
BLAST of DN617635 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190
Match NameE-valueIdentityDescription
PPIL2_ARATH1.033e-1243.27Peptidyl-prolyl cis-trans isomerase-like 2 OS=Arab... [more]
PPIL1_NEUCR1.033e-1242.31Peptidyl-prolyl cis-trans isomerase-like 1 OS=Neur... [more]
PPIB_TREPA1.033e-1245.19Probable peptidyl-prolyl cis-trans isomerase OS=Tr... [more]
PPIL1_ASPNG1.349e-1243.27Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspe... [more]
CYP7_YEAST1.349e-1234.27Peptidyl-prolyl cis-trans isomerase CYP7 OS=Saccha... [more]
PPIL3_MOUSE2.300e-1242.31Peptidyl-prolyl cis-trans isomerase-like 3 OS=Mus ... [more]
PPIL1_CRYNE2.300e-1240.50Peptidyl-prolyl cis-trans isomerase-like 1 OS=Cryp... [more]
PPI1_STAES5.125e-1243.69Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPI1_STAEQ5.125e-1243.69Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPIL1_MOUSE8.742e-1239.83Peptidyl-prolyl cis-trans isomerase-like 1 OS=Mus ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01H17_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001H17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617635 ID=DN617635; Name=DN617635; organism=Citrus sinensis; type=EST; length=398bp
TTAGTTTGTTTTTTTCTCTCCAATCAACCAATCAAAAATGCCAAACCCCA
AAGTGTTCTTCGACATGACCGTCGGCGGTCAGCCGGCCGGCAGGATCGTG
ATGGAGCTCTTCGCCGATGTCACCCCCCGAACCGCCGAGAACTTCCGCGC
CCTCTGCACCGGCGAGAAAGGCGTCGGCAAGTCCGGCAAGCCTCTCCACT
ACAAAGGCTCGTCCTTCCACCGTGTGATCCCCGGATTCATGTGCCAGGGG
GGAGACTTCACCGCCGGAAACGGAACCGGAGGCGAATCAATCTACGGCTC
GAAATTCGCCGATGAGAACTTCGTGAAGAAGCACACCGGCCCCGGAATCC
TCTCCATGGCGAATGCCGGACCCGGAACCAACGGATCTCATTTCTTCG
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