DN617635

Overview
NameDN617635
Unique NameDN617635
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length398
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11875 contig Csv1_Contig11875:31..428. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617635 vs. ExPASy Swiss-Prot
Match: PPIL1_HUMAN (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Homo sapiens GN=PPIL1 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 8.742e-12
Identity = 47/118 (39.83%), Postives = 61/118 (51.69%), Query Frame = 2
Query:   47 PKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSHFF 397
            P V+ + ++G      IV+EL+    P+T +NF  L    +G        +Y G+ FHR+I  FM Q             SIYG +F DE     K TG GIL+MANAGP TNGS FF
Sbjct:   12 PNVYLETSMG-----IIVLELYWKHAPKTCKNFAELA--RRG--------YYNGTKFHRIIKDFMIQGGDPTGTGRGGA-SIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFF 113          
BLAST of DN617635 vs. ExPASy Swiss-Prot
Match: PPIL1_BOVIN (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Bos taurus GN=PPIL1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 8.742e-12
Identity = 47/118 (39.83%), Postives = 61/118 (51.69%), Query Frame = 2
Query:   47 PKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSHFF 397
            P V+ + ++G      IV+EL+    P+T +NF  L    +G        +Y G+ FHR+I  FM Q             SIYG +F DE     K TG GIL+MANAGP TNGS FF
Sbjct:   12 PNVYLETSMG-----IIVLELYWKHAPKTCKNFAELA--RRG--------YYNGTKFHRIIKDFMIQGGDPTGTGRGGA-SIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFF 113          
BLAST of DN617635 vs. ExPASy Swiss-Prot
Match: PPIL2_MOUSE (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Mus musculus GN=Ppil2 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 1.142e-11
Identity = 43/104 (41.35%), Postives = 53/104 (50.96%), Query Frame = 2
Query:   89 GRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSHFF 397
            G + +EL  D+TP+T ENF  LC          K  +Y G+ FHR I  F+ Q            ES +G  F DE      HTG G+LSMAN+GP TN S FF
Sbjct:  289 GDLNLELHCDLTPKTCENFIKLC----------KKQYYDGTIFHRSIRNFVIQGGDPTGTGTGG-ESFWGKPFKDEFRPNLSHTGRGVLSMANSGPNTNKSQFF 381          
BLAST of DN617635 vs. ExPASy Swiss-Prot
Match: PPI1_STAHJ (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=SH1997 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.142e-11
Identity = 44/103 (42.72%), Postives = 53/103 (51.46%), Query Frame = 2
Query:   89 GRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFF 397
            G +  +LF D+ P+T ENF           K+G   +Y G +FHRVI  FM Q            ESIYG  F DE  ++     G LSMANAGP TNGS FF
Sbjct:   25 GDMTFKLFPDIAPKTVENFVTHA-------KNG---YYDGITFHRVINDFMIQGGDPTATGMGG-ESIYGGSFEDEFSLEAFNLYGALSMANAGPNTNGSQFF 116          
BLAST of DN617635 vs. ExPASy Swiss-Prot
Match: PPIL3_DICDI (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Dictyostelium discoideum GN=ppil3 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.543e-11
Identity = 45/105 (42.86%), Postives = 53/105 (50.48%), Query Frame = 2
Query:   89 GRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK--KHTGPGILSMANAGPGTNGSHFF 397
            G I +E+F D  P  +ENF ALC             +Y  + FHR I GFM Q            ESI+  +F DE F    KH   GILSMAN+GP TNGS FF
Sbjct:   10 GDIKVEIFCDSVPLASENFLALCASN----------YYNNTIFHRNIKGFMIQGGDPTNTGRGG-ESIWKKQFKDE-FPSHLKHNTRGILSMANSGPDTNGSQFF 102          
BLAST of DN617635 vs. ExPASy Swiss-Prot
Match: BPPI_STRP6 (Putative bifunctional phosphatase/peptidyl-prolyl cis-trans isomerase OS=Streptococcus pyogenes serotype M6 GN=M6_Spy1377 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.543e-11
Identity = 43/103 (41.75%), Postives = 52/103 (50.49%), Query Frame = 2
Query:   89 GRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFF 397
            G + + LF D  P+T  NF        G+ K G   +Y G  FHR+IP FM Q            +SIYG  F DE   + +   G LSMANAGP TNGS FF
Sbjct:  297 GDMTLVLFPDHAPKTVANFL-------GLAKEG---YYDGIIFHRIIPEFMIQGGDPTGTGMGG-QSIYGESFEDEFSDELYNLRGALSMANAGPNTNGSQFF 388          
BLAST of DN617635 vs. ExPASy Swiss-Prot
Match: PPIL3_CRYNE (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Cryptococcus neoformans GN=CYP10 PE=3 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 3.322e-11
Identity = 45/104 (43.27%), Postives = 56/104 (53.85%), Query Frame = 2
Query:   89 GRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADE-NFVKKHTGPGILSMANAGPGTNGSHFF 397
            G I +ELF +  PRTAENF ALC        SG+   Y G+ FHR I GFM Q            +SI+G  F+DE     +    G+++MANAGP TN S FF
Sbjct:   10 GDIKIELFCESVPRTAENFLALCA-------SGQ---YDGTLFHRNIRGFMIQ-GGDPTGTGKGGQSIWGRPFSDEIRQTLRFNNRGMVAMANAGPDTNKSQFF 102          
BLAST of DN617635 vs. ExPASy Swiss-Prot
Match: PPIL2_HUMAN (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Homo sapiens GN=PPIL2 PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.338e-11
Identity = 43/104 (41.35%), Postives = 53/104 (50.96%), Query Frame = 2
Query:   89 GRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSHFF 397
            G + +EL  D+TP+T ENF  LC          K  +Y G+ FHR I  F+ Q            ES +G  F DE      HTG GILSMAN+GP +N S FF
Sbjct:  289 GDLNLELHCDLTPKTCENFIRLC----------KKHYYDGTIFHRSIRNFVIQGGDPTGTGTGG-ESYWGKPFKDEFRPNLSHTGRGILSMANSGPNSNRSQFF 381          
BLAST of DN617635 vs. ExPASy Swiss-Prot
Match: PPIL2_CRYNE (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Cryptococcus neoformans GN=CYP8 PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.666e-11
Identity = 45/106 (42.45%), Postives = 54/106 (50.94%), Query Frame = 2
Query:   89 GRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK---KHTGPGILSMANAGPGTNGSHFF 397
            G + +EL  D  P+T  NF  L        K+GK   Y    FHR+IPGFM Q            ES +G  F DE+  K   KH   G+LSMAN+GP TNGS FF
Sbjct:  323 GPLNVELHGDRAPKTVYNFVQLA-------KAGK---YDNVVFHRLIPGFMVQGGDPTGTGRGG-ESYWGEPFRDEHGEKGAYKHDSRGVLSMANSGPRTNGSQFF 417          
BLAST of DN617635 vs. ExPASy Swiss-Prot
Match: CYPE_DICDI (Peptidyl-prolyl cis-trans isomerase cypE OS=Dictyostelium discoideum GN=cypE PE=1 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.400e-11
Identity = 43/104 (41.35%), Postives = 54/104 (51.92%), Query Frame = 2
Query:   89 GRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSHFF 397
            G I +EL+ +  P+  +NF  L           K  +Y  + FHR+I  FM Q            ESIYG KF DE   + KHTG GILSMAN+G  +NGS FF
Sbjct:   13 GDITLELYYNHAPKACKNFYEL----------SKRGYYDNTIFHRLIKDFMIQGGDPLGNGRGG-ESIYGKKFEDEITKELKHTGAGILSMANSGVNSNGSQFF 105          
The following BLAST results are available for this feature:
BLAST of DN617635 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190
Match NameE-valueIdentityDescription
PPIL1_HUMAN8.742e-1239.83Peptidyl-prolyl cis-trans isomerase-like 1 OS=Homo... [more]
PPIL1_BOVIN8.742e-1239.83Peptidyl-prolyl cis-trans isomerase-like 1 OS=Bos ... [more]
PPIL2_MOUSE1.142e-1141.35Peptidyl-prolyl cis-trans isomerase-like 2 OS=Mus ... [more]
PPI1_STAHJ1.142e-1142.72Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPIL3_DICDI2.543e-1142.86Peptidyl-prolyl cis-trans isomerase-like 3 OS=Dict... [more]
BPPI_STRP62.543e-1141.75Putative bifunctional phosphatase/peptidyl-prolyl ... [more]
PPIL3_CRYNE3.322e-1143.27Peptidyl-prolyl cis-trans isomerase-like 3 OS=Cryp... [more]
PPIL2_HUMAN4.338e-1141.35Peptidyl-prolyl cis-trans isomerase-like 2 OS=Homo... [more]
PPIL2_CRYNE5.666e-1142.45Peptidyl-prolyl cis-trans isomerase-like 2 OS=Cryp... [more]
CYPE_DICDI7.400e-1141.35Peptidyl-prolyl cis-trans isomerase cypE OS=Dictyo... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01H17_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001H17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617635 ID=DN617635; Name=DN617635; organism=Citrus sinensis; type=EST; length=398bp
TTAGTTTGTTTTTTTCTCTCCAATCAACCAATCAAAAATGCCAAACCCCA
AAGTGTTCTTCGACATGACCGTCGGCGGTCAGCCGGCCGGCAGGATCGTG
ATGGAGCTCTTCGCCGATGTCACCCCCCGAACCGCCGAGAACTTCCGCGC
CCTCTGCACCGGCGAGAAAGGCGTCGGCAAGTCCGGCAAGCCTCTCCACT
ACAAAGGCTCGTCCTTCCACCGTGTGATCCCCGGATTCATGTGCCAGGGG
GGAGACTTCACCGCCGGAAACGGAACCGGAGGCGAATCAATCTACGGCTC
GAAATTCGCCGATGAGAACTTCGTGAAGAAGCACACCGGCCCCGGAATCC
TCTCCATGGCGAATGCCGGACCCGGAACCAACGGATCTCATTTCTTCG
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