DN617635

Overview
NameDN617635
Unique NameDN617635
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length398
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11875 contig Csv1_Contig11875:31..428. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617635 vs. ExPASy Swiss-Prot
Match: PPIA_FELCA (Peptidyl-prolyl cis-trans isomerase A OS=Felis catus GN=PPIA PE=2 SV=3)

HSP 1 Score: 154.066 bits (388), Expect = 2.066e-37
Identity = 76/120 (63.33%), Postives = 84/120 (70.00%), Query Frame = 2
Query:   38 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFF 397
            M NP VFFD+ V G+P GR+  +LFAD  P+TAENFRAL TGEKG G       YKGS FHR+IPGFMCQ            +SIYG KF DENF+ KHTGPGILSMANAGP TNGS FF
Sbjct:    1 MVNPIVFFDIAVDGEPLGRVSFDLFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFDDENFILKHTGPGILSMANAGPNTNGSQFF 113          
BLAST of DN617635 vs. ExPASy Swiss-Prot
Match: PPIF_HUMAN (Peptidyl-prolyl cis-trans isomerase, mitochondrial OS=Homo sapiens GN=PPIF PE=1 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 2.699e-37
Identity = 75/126 (59.52%), Postives = 86/126 (68.25%), Query Frame = 2
Query:   20 PINQSKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFF 397
            P + S   NP V+ D+   G+P GR+V+EL ADV P+TAENFRALCTGEKG G       YKGS+FHRVIP FMCQ            +SIYGS+F DENF  KH GPG+LSMANAGP TNGS FF
Sbjct:   37 PSSSSSSGNPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFG-------YKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFF 155          
BLAST of DN617635 vs. ExPASy Swiss-Prot
Match: PPID_BOVIN (40 kDa peptidyl-prolyl cis-trans isomerase OS=Bos taurus GN=PPID PE=1 SV=6)

HSP 1 Score: 153.68 bits (387), Expect = 2.699e-37
Identity = 75/123 (60.98%), Postives = 87/123 (70.73%), Query Frame = 2
Query:   32 SKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKS-GKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFF 397
            S   NP+VFFD+ +GG+  GRIV+ELFAD+ P+TAENFRALCTGEKG+G + GKPLH+KG  FHR+I  FM Q            ESIYG KF DENF  KH   G+LSMANAG  TNGS FF
Sbjct:   11 SNPSNPRVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDKEGLLSMANAGSNTNGSQFF 133          
BLAST of DN617635 vs. ExPASy Swiss-Prot
Match: PPID_HUMAN (40 kDa peptidyl-prolyl cis-trans isomerase OS=Homo sapiens GN=PPID PE=1 SV=3)

HSP 1 Score: 153.295 bits (386), Expect = 3.524e-37
Identity = 75/123 (60.98%), Postives = 87/123 (70.73%), Query Frame = 2
Query:   32 SKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKS-GKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFF 397
            S   NP+VFFD+ +GG+  GRIV+ELFAD+ P+TAENFRALCTGEKG+G + GKPLH+KG  FHR+I  FM Q            ESIYG KF DENF  KH   G+LSMANAG  TNGS FF
Sbjct:   11 SNPSNPRVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGHTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDREGLLSMANAGRNTNGSQFF 133          
BLAST of DN617635 vs. ExPASy Swiss-Prot
Match: PPIA_HEMPU (Peptidyl-prolyl cis-trans isomerase OS=Hemicentrotus pulcherrimus PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 3.524e-37
Identity = 78/120 (65.00%), Postives = 84/120 (70.00%), Query Frame = 2
Query:   38 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFF 397
            M  P+VFFD+   G+  GRIVMEL ADV P+TAENFRALCTGEKG G       YKGS+FHRVIPGFMCQ            +SIYG KFADENF  KHT PGILSMANAG  TNGS FF
Sbjct:    1 MAKPQVFFDLQANGENLGRIVMELRADVVPKTAENFRALCTGEKGFG-------YKGSTFHRVIPGFMCQGGDFTRHNGTGGKSIYGEKFADENFTLKHTQPGILSMANAGVNTNGSQFF 113          
BLAST of DN617635 vs. ExPASy Swiss-Prot
Match: PPIF_RAT (Peptidyl-prolyl cis-trans isomerase, mitochondrial OS=Rattus norvegicus GN=Ppif PE=1 SV=2)

HSP 1 Score: 152.525 bits (384), Expect = 6.012e-37
Identity = 75/122 (61.48%), Postives = 84/122 (68.85%), Query Frame = 2
Query:   32 SKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFF 397
            S   NP V+ D+   GQP GR+V+EL ADV P+TAENFRALCTGEKG G       YKGS+FHRVIP FMCQ            +SIYGS+F DENF  KH GPG+LSMANAGP TNGS FF
Sbjct:   40 SSSQNPLVYLDVGADGQPLGRVVLELKADVVPKTAENFRALCTGEKGFG-------YKGSTFHRVIPAFMCQAGDFTNHNGTGGKSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFF 154          
BLAST of DN617635 vs. ExPASy Swiss-Prot
Match: PPIA1_RHIOR (Peptidyl-prolyl cis-trans isomerase A1 OS=Rhizopus oryzae GN=cyp2 PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 6.012e-37
Identity = 78/120 (65.00%), Postives = 84/120 (70.00%), Query Frame = 2
Query:   38 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFF 397
            M NPKVFFD++   +P GRIVMEL ADV P+TAENFRALCTGEKG G       YKG SFHRVIP FM Q            +SIYG+KF DENF  KHTGPG LSMANAGP TNGS FF
Sbjct:    1 MSNPKVFFDVSANSKPLGRIVMELRADVVPQTAENFRALCTGEKGFG-------YKGCSFHRVIPEFMLQGGDFTNHNGTGGKSIYGNKFRDENFTLKHTGPGDLSMANAGPNTNGSQFF 113          
BLAST of DN617635 vs. ExPASy Swiss-Prot
Match: PPIF_MOUSE (Peptidyl-prolyl cis-trans isomerase, mitochondrial OS=Mus musculus GN=Ppif PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 1.025e-36
Identity = 75/122 (61.48%), Postives = 83/122 (68.03%), Query Frame = 2
Query:   32 SKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFF 397
            S   NP V+ D+   GQP GR+V+EL ADV P+TAENFRALCTGEKG G       YKGS+FHRVIP FMCQ             SIYGS+F DENF  KH GPG+LSMANAGP TNGS FF
Sbjct:   40 SSSGNPLVYLDVGADGQPLGRVVLELKADVVPKTAENFRALCTGEKGFG-------YKGSTFHRVIPAFMCQAGDFTNHNGTGGRSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFF 154          
BLAST of DN617635 vs. ExPASy Swiss-Prot
Match: PPIF_BOVIN (Peptidyl-prolyl cis-trans isomerase, mitochondrial OS=Bos taurus GN=PPIF PE=1 SV=2)

HSP 1 Score: 151.369 bits (381), Expect = 1.339e-36
Identity = 75/124 (60.48%), Postives = 85/124 (68.55%), Query Frame = 2
Query:   26 NQSKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFF 397
            + S   NP V+ D+   GQP GR+V+EL ADV P+TAENFRALCTGEKG G       YKGS+FHRVIP FMCQ            +SIYGS+F DENF  KH GPG+LSMANAGP TNGS FF
Sbjct:   40 SSSSSGNPLVYLDVGADGQPLGRVVLELKADVVPKTAENFRALCTGEKGFG-------YKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGSRFPDENFKLKHEGPGVLSMANAGPNTNGSQFF 156          
BLAST of DN617635 vs. ExPASy Swiss-Prot
Match: CYP11_RHIOR (Peptidyl-prolyl cis-trans isomerase cyp11 OS=Rhizopus oryzae GN=cyp11 PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 1.749e-36
Identity = 75/121 (61.98%), Postives = 85/121 (70.25%), Query Frame = 2
Query:   38 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGK-SGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSHFF 397
            M NP+VFFD+ V G   GRIV+ELFAD  P+TAENFRALCTGEKG+GK S  PLHYKGS FHR+I GFMCQ            ESIYG+ F DE+F +KH   G+LSMAN GP T  S FF
Sbjct:    1 MINPRVFFDIDVDGNRIGRIVIELFADQVPKTAENFRALCTGEKGIGKVSNMPLHYKGSIFHRIIKGFMCQGGDFTHRTGKGGESIYGANFPDESFSRKHDTHGLLSMANRGPNTQTSQFF 121          
The following BLAST results are available for this feature:
BLAST of DN617635 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190
Match NameE-valueIdentityDescription
PPIA_FELCA2.066e-3763.33Peptidyl-prolyl cis-trans isomerase A OS=Felis cat... [more]
PPIF_HUMAN2.699e-3759.52Peptidyl-prolyl cis-trans isomerase, mitochondrial... [more]
PPID_BOVIN2.699e-3760.9840 kDa peptidyl-prolyl cis-trans isomerase OS=Bos ... [more]
PPID_HUMAN3.524e-3760.9840 kDa peptidyl-prolyl cis-trans isomerase OS=Homo... [more]
PPIA_HEMPU3.524e-3765.00Peptidyl-prolyl cis-trans isomerase OS=Hemicentrot... [more]
PPIF_RAT6.012e-3761.48Peptidyl-prolyl cis-trans isomerase, mitochondrial... [more]
PPIA1_RHIOR6.012e-3765.00Peptidyl-prolyl cis-trans isomerase A1 OS=Rhizopus... [more]
PPIF_MOUSE1.025e-3661.48Peptidyl-prolyl cis-trans isomerase, mitochondrial... [more]
PPIF_BOVIN1.339e-3660.48Peptidyl-prolyl cis-trans isomerase, mitochondrial... [more]
CYP11_RHIOR1.749e-3661.98Peptidyl-prolyl cis-trans isomerase cyp11 OS=Rhizo... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01H17_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001H17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617635 ID=DN617635; Name=DN617635; organism=Citrus sinensis; type=EST; length=398bp
TTAGTTTGTTTTTTTCTCTCCAATCAACCAATCAAAAATGCCAAACCCCA
AAGTGTTCTTCGACATGACCGTCGGCGGTCAGCCGGCCGGCAGGATCGTG
ATGGAGCTCTTCGCCGATGTCACCCCCCGAACCGCCGAGAACTTCCGCGC
CCTCTGCACCGGCGAGAAAGGCGTCGGCAAGTCCGGCAAGCCTCTCCACT
ACAAAGGCTCGTCCTTCCACCGTGTGATCCCCGGATTCATGTGCCAGGGG
GGAGACTTCACCGCCGGAAACGGAACCGGAGGCGAATCAATCTACGGCTC
GAAATTCGCCGATGAGAACTTCGTGAAGAAGCACACCGGCCCCGGAATCC
TCTCCATGGCGAATGCCGGACCCGGAACCAACGGATCTCATTTCTTCG
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