DN617634

Overview
NameDN617634
Unique NameDN617634
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length538
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617634 vs. ExPASy Swiss-Prot
Match: PGKG_TRYCO (Phosphoglycerate kinase, glycosomal OS=Trypanosoma congolense GN=56PGK PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 6.232e-14
Identity = 37/51 (72.55%), Postives = 43/51 (84.31%), Query Frame = -3
Query:  372 GVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 524
            G+ +IIGGGDS +A E+ G A +MSH+STGGGASLELLEGKTLPGV  LDD
Sbjct:  457 GLMSIIGGGDSASAAEQSGEATRMSHVSTGGGASLELLEGKTLPGVAILDD 507          
BLAST of DN617634 vs. ExPASy Swiss-Prot
Match: PGK_THETN (Phosphoglycerate kinase OS=Thermoanaerobacter tengcongensis GN=pgk PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 8.139e-14
Identity = 35/49 (71.43%), Postives = 43/49 (87.76%), Query Frame = -3
Query:  372 TTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 518
            TTI+GGGDS AA+E++G ADK++HISTGGGASLE LEGK LPG+  L+D
Sbjct:  345 TTIVGGGDSAAAIEQLGYADKVTHISTGGGASLEFLEGKVLPGIDILND 393          
BLAST of DN617634 vs. ExPASy Swiss-Prot
Match: PGK_RUBXD (Phosphoglycerate kinase OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=pgk PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 8.139e-14
Identity = 35/51 (68.63%), Postives = 43/51 (84.31%), Query Frame = -3
Query:  372 GVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 524
            G T+++GGGDSVAAV K+GL D+MSHISTGGGASLE +EG+ LPGV  L +
Sbjct:  338 GATSVVGGGDSVAAVRKLGLEDRMSHISTGGGASLEYVEGRELPGVAVLPE 388          
BLAST of DN617634 vs. ExPASy Swiss-Prot
Match: PGK_LEUMM (Phosphoglycerate kinase OS=Leuconostoc mesenteroides subsp. mesenteroides (strain ATCC 8293 / NCDO 523) GN=pgk PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 8.139e-14
Identity = 34/51 (66.67%), Postives = 45/51 (88.24%), Query Frame = -3
Query:  372 GVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 524
            G TTI+GGGDS AAV+++G+ADK++HISTGGGASLE LEGK LPG+ ++ +
Sbjct:  354 GGTTIVGGGDSTAAVQQLGVADKLTHISTGGGASLEYLEGKELPGIASISE 404          
BLAST of DN617634 vs. ExPASy Swiss-Prot
Match: PGK_ACIBL (Phosphoglycerate kinase OS=Acidobacteria bacterium (strain Ellin345) GN=pgk PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 8.139e-14
Identity = 37/49 (75.51%), Postives = 42/49 (85.71%), Query Frame = -3
Query:  378 GVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 524
            G T+I+GGGDSVAAV   G+ADK++HISTGGGASLE LEGK LPGV AL
Sbjct:  352 GATSIVGGGDSVAAVHDAGVADKITHISTGGGASLEFLEGKKLPGVEAL 400          
BLAST of DN617634 vs. ExPASy Swiss-Prot
Match: PGK_SYMTH (Phosphoglycerate kinase OS=Symbiobacterium thermophilum GN=pgk PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.063e-13
Identity = 36/46 (78.26%), Postives = 40/46 (86.96%), Query Frame = -3
Query:  378 TIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 515
            TI+GGGDSVAAVE  GLAD+M+H+STGGGASLE LEGK LPGV  L
Sbjct:  343 TIVGGGDSVAAVEAAGLADRMTHVSTGGGASLEFLEGKELPGVACL 388          
BLAST of DN617634 vs. ExPASy Swiss-Prot
Match: PGK_MACCJ (Phosphoglycerate kinase OS=Macrococcus caseolyticus (strain JCSC5402) GN=pgk PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.063e-13
Identity = 36/52 (69.23%), Postives = 41/52 (78.85%), Query Frame = -3
Query:  372 KGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 527
            KG TTIIGGGDS AA   +G ADK +HISTGGGASLE LEGK LPG+ ++ D
Sbjct:  344 KGATTIIGGGDSAAAAMDLGFADKFTHISTGGGASLEYLEGKELPGIKSISD 395          
BLAST of DN617634 vs. ExPASy Swiss-Prot
Match: PGKB_TRYBB (Phosphoglycerate kinase, cytosolic OS=Trypanosoma brucei brucei PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.063e-13
Identity = 37/51 (72.55%), Postives = 42/51 (82.35%), Query Frame = -3
Query:  372 GVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 524
            G+ +IIGGGDS +A E  G A +MSH+STGGGASLELLEGKTLPGV  LDD
Sbjct:  369 GLMSIIGGGDSASAAELSGEAKRMSHVSTGGGASLELLEGKTLPGVTVLDD 419          
BLAST of DN617634 vs. ExPASy Swiss-Prot
Match: PGK_TREPS (Phosphoglycerate kinase OS=Treponema pallidum subsp. pallidum (strain SS14) GN=pgk PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.388e-13
Identity = 33/50 (66.00%), Postives = 42/50 (84.00%), Query Frame = -3
Query:  375 GVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 524
            G T+++GGGDS+AAV K GLA +MSH+STGGGASL+L EGK LPG+  L+
Sbjct:  369 GATSVVGGGDSIAAVSKFGLASRMSHVSTGGGASLKLFEGKVLPGISCLE 418          
BLAST of DN617634 vs. ExPASy Swiss-Prot
Match: PGK_TREPA (Phosphoglycerate kinase OS=Treponema pallidum GN=pgk PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.388e-13
Identity = 33/50 (66.00%), Postives = 42/50 (84.00%), Query Frame = -3
Query:  375 GVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 524
            G T+++GGGDS+AAV K GLA +MSH+STGGGASL+L EGK LPG+  L+
Sbjct:  369 GATSVVGGGDSIAAVSKFGLASRMSHVSTGGGASLKLFEGKVLPGISCLE 418          
The following BLAST results are available for this feature:
BLAST of DN617634 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 317
Match NameE-valueIdentityDescription
PGKG_TRYCO6.232e-1472.55Phosphoglycerate kinase, glycosomal OS=Trypanosoma... [more]
PGK_THETN8.139e-1471.43Phosphoglycerate kinase OS=Thermoanaerobacter teng... [more]
PGK_RUBXD8.139e-1468.63Phosphoglycerate kinase OS=Rubrobacter xylanophilu... [more]
PGK_LEUMM8.139e-1466.67Phosphoglycerate kinase OS=Leuconostoc mesenteroid... [more]
PGK_ACIBL8.139e-1475.51Phosphoglycerate kinase OS=Acidobacteria bacterium... [more]
PGK_SYMTH1.063e-1378.26Phosphoglycerate kinase OS=Symbiobacterium thermop... [more]
PGK_MACCJ1.063e-1369.23Phosphoglycerate kinase OS=Macrococcus caseolyticu... [more]
PGKB_TRYBB1.063e-1372.55Phosphoglycerate kinase, cytosolic OS=Trypanosoma ... [more]
PGK_TREPS1.388e-1366.00Phosphoglycerate kinase OS=Treponema pallidum subs... [more]
PGK_TREPA1.388e-1366.00Phosphoglycerate kinase OS=Treponema pallidum GN=p... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01H17_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001H17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617634 ID=DN617634; Name=DN617634; organism=Citrus sinensis; type=EST; length=538bp
AGTTTAATAGCATTCGTGAAGAATATTGCCTGAAAACATCATTCAAGAAA
CAATGGAAATATTGTAGTGCCAGGATTCATGCATTATCTAACAATCATCA
ACGGCTCATTGTGATCAGAAAGGAACAAGAACTTGACTTCAGGAAACTTA
TAGCCTTACCATCACAATGTTCCAAAATGGGATCAAATCCAGAAAAATGC
ATCACCATTGATGCCTGTGAGAAAGAATTTATTTTTACTCTTACAGCATC
TACAAAACCAACTCTAATGATAAAGTTTAACTTTTATCCACTCTGGGCTG
ACAACCAGCCACACATACAACTCTGGAAATGGCACATTTAAAAAAGGAAA
GTCCAGGAACTGGGTTTAAGCATCATCAAGAGCAAGCACACCAGGGAGTG
TTTTGCCCTCAAGGAGCTCTAAGCTGGCTCCACCTCCAGTGGAGATATGG
CTCATCTTGTCAGCCAGACCAACCTTCTCTACGGCTGCAACTGAGTCACC
TCCTCCAATGATTGTGGTCACTCCCTTCCCGCTGAGCT
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