DN617634

Overview
NameDN617634
Unique NameDN617634
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length538
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617634 vs. ExPASy Swiss-Prot
Match: PGK_AGABI (Phosphoglycerate kinase OS=Agaricus bisporus GN=pgkA PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.217e-11
Identity = 32/52 (61.54%), Postives = 38/52 (73.08%), Query Frame = -3
Query:  372 KGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 527
            KG T I+GGGD+   V      +K+SH+STGGGASLELLEGKTLPGV  L +
Sbjct:  364 KGATVIVGGGDTATVVANHDAEEKLSHVSTGGGASLELLEGKTLPGVAELSN 415          
BLAST of DN617634 vs. ExPASy Swiss-Prot
Match: PGK2_HUMAN (Phosphoglycerate kinase 2 OS=Homo sapiens GN=PGK2 PE=1 SV=3)

HSP 1 Score: 68.5514 bits (166), Expect = 2.217e-11
Identity = 33/54 (61.11%), Postives = 39/54 (72.22%), Query Frame = -3
Query:  372 SGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 533
            + KG  T+IGGGD+     K    DK+SH+STGGGASLELLEGK LPGV AL +
Sbjct:  363 TSKGCITVIGGGDTATCCAKWNTEDKVSHVSTGGGASLELLEGKILPGVEALSN 416          
BLAST of DN617634 vs. ExPASy Swiss-Prot
Match: PGK_SYNFM (Phosphoglycerate kinase OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=pgk PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.895e-11
Identity = 31/48 (64.58%), Postives = 41/48 (85.42%), Query Frame = -3
Query:  372 TIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 515
            T+IGGGDS AAV++  + DK+S++STGGGA LE+LEG TLPGV AL++
Sbjct:  345 TVIGGGDSAAAVKQANMEDKVSYVSTGGGAFLEMLEGITLPGVAALEE 392          
BLAST of DN617634 vs. ExPASy Swiss-Prot
Match: PGK_SPICI (Phosphoglycerate kinase OS=Spiroplasma citri GN=pgk PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.895e-11
Identity = 32/50 (64.00%), Postives = 39/50 (78.00%), Query Frame = -3
Query:  378 KGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 527
            KG  T+IGGGDS AA  ++G  DK +HISTGGGASLE +EGK LPG+ A+
Sbjct:  360 KGAFTLIGGGDSAAAAIQLGYKDKFTHISTGGGASLEYMEGKPLPGIEAV 409          
BLAST of DN617634 vs. ExPASy Swiss-Prot
Match: PGKC_CRIFA (Phosphoglycerate kinase, glycosomal OS=Crithidia fasciculata GN=PGKC PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.895e-11
Identity = 33/49 (67.35%), Postives = 39/49 (79.59%), Query Frame = -3
Query:  378 GVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 524
            G+ +IIGGGD+ +A E  G A  MSH+STGGGASLELLEGK+LPGV  L
Sbjct:  365 GLMSIIGGGDTASAAELSGEAKNMSHVSTGGGASLELLEGKSLPGVTVL 413          
BLAST of DN617634 vs. ExPASy Swiss-Prot
Match: PGKB_CRIFA (Phosphoglycerate kinase, cytosolic OS=Crithidia fasciculata GN=PGKB PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.895e-11
Identity = 33/49 (67.35%), Postives = 39/49 (79.59%), Query Frame = -3
Query:  378 GVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 524
            G+ +IIGGGD+ +A E  G A  MSH+STGGGASLELLEGK+LPGV  L
Sbjct:  365 GLMSIIGGGDTASAAELSGEAKNMSHVSTGGGASLELLEGKSLPGVTVL 413          
BLAST of DN617634 vs. ExPASy Swiss-Prot
Match: PGK_STAHJ (Phosphoglycerate kinase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=pgk PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.781e-11
Identity = 33/52 (63.46%), Postives = 38/52 (73.08%), Query Frame = -3
Query:  372 KGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 527
            K  TTIIGGGDS AA   +G  D  +HISTGGGASLE LEG  LPG+ A++D
Sbjct:  344 KDATTIIGGGDSAAAAISLGFEDDFTHISTGGGASLEYLEGIELPGIKAIND 395          
BLAST of DN617634 vs. ExPASy Swiss-Prot
Match: PGK_SALAI (Phosphoglycerate kinase OS=Salinispora arenicola (strain CNS-205) GN=pgk PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.781e-11
Identity = 33/49 (67.35%), Postives = 41/49 (83.67%), Query Frame = -3
Query:  372 TIIGGGDSVAAVEKVGLADK-MSHISTGGGASLELLEGKTLPGVLALDD 515
            T++GGGDS AAV  +GL ++  SHISTGGGASLE LEGKTLPG+ AL++
Sbjct:  351 TVVGGGDSAAAVRALGLDEQAFSHISTGGGASLEYLEGKTLPGIAALEN 399          
BLAST of DN617634 vs. ExPASy Swiss-Prot
Match: PGK_MARAV (Phosphoglycerate kinase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=pgk PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.781e-11
Identity = 31/48 (64.58%), Postives = 41/48 (85.42%), Query Frame = -3
Query:  372 TIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 515
            ++ GGGD+VAAV+K G+ADK+S+ISTGGGA LE +EGKTLP V  L++
Sbjct:  336 SLAGGGDTVAAVDKYGVADKISYISTGGGAFLEFVEGKTLPAVAVLEE 383          
BLAST of DN617634 vs. ExPASy Swiss-Prot
Match: PGK_BEUC1 (Phosphoglycerate kinase OS=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) GN=pgk PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.781e-11
Identity = 34/52 (65.38%), Postives = 39/52 (75.00%), Query Frame = -3
Query:  372 GVTTIIGGGDSVAAVEKVGLADK-MSHISTGGGASLELLEGKTLPGVLALDD 524
            G  TI+GGGDS AAV  +G  +   SHISTGGGASLE LEGKTLPG+  L+D
Sbjct:  348 GAFTIVGGGDSAAAVRSLGFDEAGFSHISTGGGASLEFLEGKTLPGLAVLED 399          
The following BLAST results are available for this feature:
BLAST of DN617634 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 317
Match NameE-valueIdentityDescription
PGK_AGABI2.217e-1161.54Phosphoglycerate kinase OS=Agaricus bisporus GN=pg... [more]
PGK2_HUMAN2.217e-1161.11Phosphoglycerate kinase 2 OS=Homo sapiens GN=PGK2 ... [more]
PGK_SYNFM2.895e-1164.58Phosphoglycerate kinase OS=Syntrophobacter fumarox... [more]
PGK_SPICI2.895e-1164.00Phosphoglycerate kinase OS=Spiroplasma citri GN=pg... [more]
PGKC_CRIFA2.895e-1167.35Phosphoglycerate kinase, glycosomal OS=Crithidia f... [more]
PGKB_CRIFA2.895e-1167.35Phosphoglycerate kinase, cytosolic OS=Crithidia fa... [more]
PGK_STAHJ3.781e-1163.46Phosphoglycerate kinase OS=Staphylococcus haemolyt... [more]
PGK_SALAI3.781e-1167.35Phosphoglycerate kinase OS=Salinispora arenicola (... [more]
PGK_MARAV3.781e-1164.58Phosphoglycerate kinase OS=Marinobacter aquaeolei ... [more]
PGK_BEUC13.781e-1165.38Phosphoglycerate kinase OS=Beutenbergia cavernae (... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01H17_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001H17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617634 ID=DN617634; Name=DN617634; organism=Citrus sinensis; type=EST; length=538bp
AGTTTAATAGCATTCGTGAAGAATATTGCCTGAAAACATCATTCAAGAAA
CAATGGAAATATTGTAGTGCCAGGATTCATGCATTATCTAACAATCATCA
ACGGCTCATTGTGATCAGAAAGGAACAAGAACTTGACTTCAGGAAACTTA
TAGCCTTACCATCACAATGTTCCAAAATGGGATCAAATCCAGAAAAATGC
ATCACCATTGATGCCTGTGAGAAAGAATTTATTTTTACTCTTACAGCATC
TACAAAACCAACTCTAATGATAAAGTTTAACTTTTATCCACTCTGGGCTG
ACAACCAGCCACACATACAACTCTGGAAATGGCACATTTAAAAAAGGAAA
GTCCAGGAACTGGGTTTAAGCATCATCAAGAGCAAGCACACCAGGGAGTG
TTTTGCCCTCAAGGAGCTCTAAGCTGGCTCCACCTCCAGTGGAGATATGG
CTCATCTTGTCAGCCAGACCAACCTTCTCTACGGCTGCAACTGAGTCACC
TCCTCCAATGATTGTGGTCACTCCCTTCCCGCTGAGCT
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