DN617634

Overview
NameDN617634
Unique NameDN617634
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length538
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DN617634 vs. ExPASy Swiss-Prot
Match: PGK_TREDE (Phosphoglycerate kinase OS=Treponema denticola GN=pgk PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.483e-15
Identity = 39/51 (76.47%), Postives = 42/51 (82.35%), Query Frame = -3 
Query:  375 KGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 527
            KG  TI+GGGDSVAAV K  LADKMSH+STGGGASLE LEGK LPG+  LD
Sbjct:  367 KGALTIVGGGDSVAAVNKFNLADKMSHVSTGGGASLEFLEGKVLPGIACLD 417
[Close]
BLAST of DN617634 vs. ExPASy Swiss-Prot
Match: PGK_LACSS (Phosphoglycerate kinase OS=Lactobacillus sakei subsp. sakei (strain 23K) GN=pgk PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.483e-15
Identity = 37/51 (72.55%), Postives = 45/51 (88.24%), Query Frame = -3 
Query:  372 GVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 524
            G TTI+GGGDS AAV+K+G+ DK++HISTGGGASLE LEGKTLPG+ A+ D
Sbjct:  353 GATTIVGGGDSTAAVKKLGVGDKLTHISTGGGASLEYLEGKTLPGIAAISD 403
[Close]
BLAST of DN617634 vs. ExPASy Swiss-Prot
Match: PGK_PELPB (Phosphoglycerate kinase OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=pgk PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.937e-15
Identity = 39/54 (72.22%), Postives = 46/54 (85.19%), Query Frame = -3 
Query:  372 SGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 533
            + +G TTIIGGGDS AAV K GLA++M+HISTGGGASLE LEGK LPG+ AL+D
Sbjct:  344 TAEGATTIIGGGDSAAAVAKAGLANEMTHISTGGGASLEFLEGKELPGIAALND 397
[Close]
BLAST of DN617634 vs. ExPASy Swiss-Prot
Match: PGK_BACSU (Phosphoglycerate kinase OS=Bacillus subtilis GN=pgk PE=1 SV=3)

HSP 1 Score: 82.0333 bits (201), Expect = 1.937e-15
Identity = 40/52 (76.92%), Postives = 44/52 (84.62%), Query Frame = -3 
Query:  372 KGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 527
            K   ++IGGGDS AAVEK GLADKMSHISTGGGASLE +EGK LPGV AL+D
Sbjct:  342 KDTYSVIGGGDSAAAVEKFGLADKMSHISTGGGASLEFMEGKELPGVAALND 393
[Close]
BLAST of DN617634 vs. ExPASy Swiss-Prot
Match: PGK_CHLL2 (Phosphoglycerate kinase OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=pgk PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.530e-15
Identity = 39/51 (76.47%), Postives = 44/51 (86.27%), Query Frame = -3 
Query:  372 GVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 524
            G TTIIGGGDS AAV K GLAD+++HISTGGGASLE LEGK LPG+ AL+D
Sbjct:  347 GATTIIGGGDSAAAVAKAGLADQITHISTGGGASLEFLEGKELPGIAALND 397
[Close]
BLAST of DN617634 vs. ExPASy Swiss-Prot
Match: PGK_BACHK (Phosphoglycerate kinase OS=Bacillus thuringiensis subsp. konkukian GN=pgk PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.530e-15
Identity = 38/52 (73.08%), Postives = 45/52 (86.54%), Query Frame = -3 
Query:  372 KGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 527
            +G  ++IGGGDS AAVEK G+ADKMSHISTGGGASLE +EGK LPGV+ L+D
Sbjct:  342 EGTYSVIGGGDSAAAVEKFGMADKMSHISTGGGASLEFMEGKELPGVVCLND 393
[Close]
BLAST of DN617634 vs. ExPASy Swiss-Prot
Match: PGK_BACCZ (Phosphoglycerate kinase OS=Bacillus cereus (strain ZK / E33L) GN=pgk PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.530e-15
Identity = 38/52 (73.08%), Postives = 45/52 (86.54%), Query Frame = -3 
Query:  372 KGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 527
            +G  ++IGGGDS AAVEK G+ADKMSHISTGGGASLE +EGK LPGV+ L+D
Sbjct:  342 EGTYSVIGGGDSAAAVEKFGMADKMSHISTGGGASLEFMEGKELPGVVCLND 393
[Close]
BLAST of DN617634 vs. ExPASy Swiss-Prot
Match: PGK_BACCQ (Phosphoglycerate kinase OS=Bacillus cereus (strain Q1) GN=pgk PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.530e-15
Identity = 38/52 (73.08%), Postives = 45/52 (86.54%), Query Frame = -3 
Query:  372 KGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 527
            +G  ++IGGGDS AAVEK G+ADKMSHISTGGGASLE +EGK LPGV+ L+D
Sbjct:  342 EGTYSVIGGGDSAAAVEKFGMADKMSHISTGGGASLEFMEGKELPGVVCLND 393
[Close]
BLAST of DN617634 vs. ExPASy Swiss-Prot
Match: PGK_BACCN (Phosphoglycerate kinase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=pgk PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.530e-15
Identity = 38/52 (73.08%), Postives = 45/52 (86.54%), Query Frame = -3 
Query:  372 KGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 527
            +G  ++IGGGDS AAVEK G+ADKMSHISTGGGASLE +EGK LPGV+ L+D
Sbjct:  342 EGTYSVIGGGDSAAAVEKFGMADKMSHISTGGGASLEFMEGKELPGVVCLND 393
[Close]
BLAST of DN617634 vs. ExPASy Swiss-Prot
Match: PGK_BACC7 (Phosphoglycerate kinase OS=Bacillus cereus (strain AH187) GN=pgk PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.530e-15
Identity = 38/52 (73.08%), Postives = 45/52 (86.54%), Query Frame = -3 
Query:  372 KGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 527
            +G  ++IGGGDS AAVEK G+ADKMSHISTGGGASLE +EGK LPGV+ L+D
Sbjct:  342 EGTYSVIGGGDSAAAVEKFGMADKMSHISTGGGASLEFMEGKELPGVVCLND 393
The following BLAST results are available for this feature:
BLAST of DN617634 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 317
Match NameE-valueIdentityDescription
PGK_TREDE1.483e-1576.47Phosphoglycerate kinase OS=Treponema denticola GN=... [more]
PGK_LACSS1.483e-1572.55Phosphoglycerate kinase OS=Lactobacillus sakei sub... [more]
PGK_PELPB1.937e-1572.22Phosphoglycerate kinase OS=Pelodictyon phaeoclathr... [more]
PGK_BACSU1.937e-1576.92Phosphoglycerate kinase OS=Bacillus subtilis GN=pg... [more]
PGK_CHLL22.530e-1576.47Phosphoglycerate kinase OS=Chlorobium limicola (st... [more]
PGK_BACHK2.530e-1573.08Phosphoglycerate kinase OS=Bacillus thuringiensis ... [more]
PGK_BACCZ2.530e-1573.08Phosphoglycerate kinase OS=Bacillus cereus (strain... [more]
PGK_BACCQ2.530e-1573.08Phosphoglycerate kinase OS=Bacillus cereus (strain... [more]
PGK_BACCN2.530e-1573.08Phosphoglycerate kinase OS=Bacillus cereus subsp. ... [more]
PGK_BACC72.530e-1573.08Phosphoglycerate kinase OS=Bacillus cereus (strain... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01H17_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001H17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617634 ID=DN617634; Name=DN617634; organism=Citrus sinensis; type=EST; length=538bp
AGTTTAATAGCATTCGTGAAGAATATTGCCTGAAAACATCATTCAAGAAA
CAATGGAAATATTGTAGTGCCAGGATTCATGCATTATCTAACAATCATCA
ACGGCTCATTGTGATCAGAAAGGAACAAGAACTTGACTTCAGGAAACTTA
TAGCCTTACCATCACAATGTTCCAAAATGGGATCAAATCCAGAAAAATGC
ATCACCATTGATGCCTGTGAGAAAGAATTTATTTTTACTCTTACAGCATC
TACAAAACCAACTCTAATGATAAAGTTTAACTTTTATCCACTCTGGGCTG
ACAACCAGCCACACATACAACTCTGGAAATGGCACATTTAAAAAAGGAAA
GTCCAGGAACTGGGTTTAAGCATCATCAAGAGCAAGCACACCAGGGAGTG
TTTTGCCCTCAAGGAGCTCTAAGCTGGCTCCACCTCCAGTGGAGATATGG
CTCATCTTGTCAGCCAGACCAACCTTCTCTACGGCTGCAACTGAGTCACC
TCCTCCAATGATTGTGGTCACTCCCTTCCCGCTGAGCT
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