DN617634

Overview
NameDN617634
Unique NameDN617634
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length538
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617634 vs. ExPASy Swiss-Prot
Match: PGK_ANOFW (Phosphoglycerate kinase OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=pgk PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 4.316e-15
Identity = 39/52 (75.00%), Postives = 44/52 (84.62%), Query Frame = -3
Query:  372 KGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 527
            K   T+IGGGDS AAVEK GLA+KM HISTGGGASLE +EGK LPGV+AL+D
Sbjct:  342 KDTYTVIGGGDSAAAVEKFGLANKMDHISTGGGASLEFMEGKQLPGVVALND 393          
BLAST of DN617634 vs. ExPASy Swiss-Prot
Match: PGK_OENOB (Phosphoglycerate kinase OS=Oenococcus oeni (strain BAA-331 / PSU-1) GN=pgk PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 5.637e-15
Identity = 36/55 (65.45%), Postives = 46/55 (83.64%), Query Frame = -3
Query:  372 LSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 536
            L+ +G  TI+GGGDS AAV ++G+AD+ +HISTGGGASLE LEGKTLPG+ A+ D
Sbjct:  349 LTSEGAATIVGGGDSTAAVSQLGIADQFTHISTGGGASLEYLEGKTLPGIAAISD 403          
BLAST of DN617634 vs. ExPASy Swiss-Prot
Match: PGK_BACP2 (Phosphoglycerate kinase OS=Bacillus pumilus (strain SAFR-032) GN=pgk PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 5.637e-15
Identity = 39/52 (75.00%), Postives = 44/52 (84.62%), Query Frame = -3
Query:  372 KGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 527
            K   ++IGGGDS AAVEK GLAD+MSHISTGGGASLE +EGK LPGV AL+D
Sbjct:  342 KDTYSVIGGGDSAAAVEKFGLADQMSHISTGGGASLEFMEGKELPGVTALND 393          
BLAST of DN617634 vs. ExPASy Swiss-Prot
Match: PGK_LACS1 (Phosphoglycerate kinase OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=pgk PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 7.362e-15
Identity = 36/49 (73.47%), Postives = 45/49 (91.84%), Query Frame = -3
Query:  372 TTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 518
            TTI+GGGDS AAV+++G+ADK++HISTGGGASLE LEGKTLPG+ A+ D
Sbjct:  351 TTIVGGGDSTAAVQQLGVADKLTHISTGGGASLEYLEGKTLPGIAAVSD 399          
BLAST of DN617634 vs. ExPASy Swiss-Prot
Match: PGK_EXIS2 (Phosphoglycerate kinase OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=pgk PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 7.362e-15
Identity = 40/55 (72.73%), Postives = 44/55 (80.00%), Query Frame = -3
Query:  372 LSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 536
            L+     +IIGGGDS AA EK GLADKMSHISTGGGASLE +EGK LPGV AL+D
Sbjct:  339 LADSDAYSIIGGGDSAAAAEKFGLADKMSHISTGGGASLEFMEGKALPGVEALND 393          
BLAST of DN617634 vs. ExPASy Swiss-Prot
Match: PGK_LACBA (Phosphoglycerate kinase OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170) GN=pgk PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 9.615e-15
Identity = 36/48 (75.00%), Postives = 44/48 (91.67%), Query Frame = -3
Query:  372 TIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 515
            TI+GGGDS AAV+++G+ADK+SHISTGGGASLE LEGKTLPG+ A+ D
Sbjct:  352 TIVGGGDSTAAVQQLGVADKLSHISTGGGASLEYLEGKTLPGIAAISD 399          
BLAST of DN617634 vs. ExPASy Swiss-Prot
Match: PGK_GLOVI (Phosphoglycerate kinase OS=Gloeobacter violaceus GN=pgk PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 9.615e-15
Identity = 36/49 (73.47%), Postives = 43/49 (87.76%), Query Frame = -3
Query:  369 TIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 515
            +I+GGGDS +A EK G+ DK+SH+STGGGASLE LEGKTLPGV ALD+A
Sbjct:  359 SIVGGGDSASAAEKAGVVDKLSHVSTGGGASLEFLEGKTLPGVAALDEA 407          
BLAST of DN617634 vs. ExPASy Swiss-Prot
Match: PGK_CHLTE (Phosphoglycerate kinase OS=Chlorobium tepidum GN=pgk PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 9.615e-15
Identity = 36/54 (66.67%), Postives = 45/54 (83.33%), Query Frame = -3
Query:  372 SGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 533
            + +G  TIIGGGDS AA+ K GL+DK++H+STGGGASLE LEGK LPG+ AL+D
Sbjct:  344 TAEGAITIIGGGDSAAAIAKAGLSDKVTHVSTGGGASLEFLEGKELPGIAALND 397          
BLAST of DN617634 vs. ExPASy Swiss-Prot
Match: PGK_BACWK (Phosphoglycerate kinase OS=Bacillus weihenstephanensis (strain KBAB4) GN=pgk PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 9.615e-15
Identity = 37/48 (77.08%), Postives = 43/48 (89.58%), Query Frame = -3
Query:  372 TIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 515
            ++IGGGDS AAVEK G+ADKMSHISTGGGASLE +EGK LPGV+ L+D
Sbjct:  346 SVIGGGDSAAAVEKFGMADKMSHISTGGGASLEFMEGKELPGVVCLND 393          
BLAST of DN617634 vs. ExPASy Swiss-Prot
Match: PGK_BACME (Phosphoglycerate kinase OS=Bacillus megaterium GN=pgk PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 9.615e-15
Identity = 38/48 (79.17%), Postives = 43/48 (89.58%), Query Frame = -3
Query:  372 TIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 515
            ++IGGGDS AAVEK  LADKMSHISTGGGASLE +EGK LPGV+AL+D
Sbjct:  346 SVIGGGDSAAAVEKFNLADKMSHISTGGGASLEFMEGKELPGVVALND 393          
The following BLAST results are available for this feature:
BLAST of DN617634 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 317
Match NameE-valueIdentityDescription
PGK_ANOFW4.316e-1575.00Phosphoglycerate kinase OS=Anoxybacillus flavither... [more]
PGK_OENOB5.637e-1565.45Phosphoglycerate kinase OS=Oenococcus oeni (strain... [more]
PGK_BACP25.637e-1575.00Phosphoglycerate kinase OS=Bacillus pumilus (strai... [more]
PGK_LACS17.362e-1573.47Phosphoglycerate kinase OS=Lactobacillus salivariu... [more]
PGK_EXIS27.362e-1572.73Phosphoglycerate kinase OS=Exiguobacterium sibiric... [more]
PGK_LACBA9.615e-1575.00Phosphoglycerate kinase OS=Lactobacillus brevis (s... [more]
PGK_GLOVI9.615e-1573.47Phosphoglycerate kinase OS=Gloeobacter violaceus G... [more]
PGK_CHLTE9.615e-1566.67Phosphoglycerate kinase OS=Chlorobium tepidum GN=p... [more]
PGK_BACWK9.615e-1577.08Phosphoglycerate kinase OS=Bacillus weihenstephane... [more]
PGK_BACME9.615e-1579.17Phosphoglycerate kinase OS=Bacillus megaterium GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01H17_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001H17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617634 ID=DN617634; Name=DN617634; organism=Citrus sinensis; type=EST; length=538bp
AGTTTAATAGCATTCGTGAAGAATATTGCCTGAAAACATCATTCAAGAAA
CAATGGAAATATTGTAGTGCCAGGATTCATGCATTATCTAACAATCATCA
ACGGCTCATTGTGATCAGAAAGGAACAAGAACTTGACTTCAGGAAACTTA
TAGCCTTACCATCACAATGTTCCAAAATGGGATCAAATCCAGAAAAATGC
ATCACCATTGATGCCTGTGAGAAAGAATTTATTTTTACTCTTACAGCATC
TACAAAACCAACTCTAATGATAAAGTTTAACTTTTATCCACTCTGGGCTG
ACAACCAGCCACACATACAACTCTGGAAATGGCACATTTAAAAAAGGAAA
GTCCAGGAACTGGGTTTAAGCATCATCAAGAGCAAGCACACCAGGGAGTG
TTTTGCCCTCAAGGAGCTCTAAGCTGGCTCCACCTCCAGTGGAGATATGG
CTCATCTTGTCAGCCAGACCAACCTTCTCTACGGCTGCAACTGAGTCACC
TCCTCCAATGATTGTGGTCACTCCCTTCCCGCTGAGCT
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