DN617634

Overview
NameDN617634
Unique NameDN617634
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length538
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617634 vs. ExPASy Swiss-Prot
Match: PGK_BACC4 (Phosphoglycerate kinase OS=Bacillus cereus (strain B4264) GN=pgk PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 9.615e-15
Identity = 37/48 (77.08%), Postives = 43/48 (89.58%), Query Frame = -3
Query:  372 TIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 515
            ++IGGGDS AAVEK G+ADKMSHISTGGGASLE +EGK LPGV+ L+D
Sbjct:  346 SVIGGGDSAAAVEKFGMADKMSHISTGGGASLEFMEGKELPGVVCLND 393          
BLAST of DN617634 vs. ExPASy Swiss-Prot
Match: PGK_BACC2 (Phosphoglycerate kinase OS=Bacillus cereus (strain G9842) GN=pgk PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 9.615e-15
Identity = 37/48 (77.08%), Postives = 43/48 (89.58%), Query Frame = -3
Query:  372 TIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 515
            ++IGGGDS AAVEK G+ADKMSHISTGGGASLE +EGK LPGV+ L+D
Sbjct:  346 SVIGGGDSAAAVEKFGMADKMSHISTGGGASLEFMEGKELPGVVCLND 393          
BLAST of DN617634 vs. ExPASy Swiss-Prot
Match: PGK_CARHZ (Phosphoglycerate kinase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=pgk PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.256e-14
Identity = 37/51 (72.55%), Postives = 44/51 (86.27%), Query Frame = -3
Query:  372 GVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 524
            G  +++GGGDSVAAVEK G+ADK++HISTGGGASLE LEGK LPGV  L+D
Sbjct:  343 GALSVVGGGDSVAAVEKAGVADKITHISTGGGASLEFLEGKKLPGVEVLND 393          
BLAST of DN617634 vs. ExPASy Swiss-Prot
Match: PGK_THEAB (Phosphoglycerate kinase OS=Thermosipho africanus (strain TCF52B) GN=pgk PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.640e-14
Identity = 36/52 (69.23%), Postives = 43/52 (82.69%), Query Frame = -3
Query:  378 SGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 533
            + KG TTIIGGGDS AA+ K GL DK+SH+STGGGASLE LEGK LPG+ ++
Sbjct:  343 TSKGATTIIGGGDSAAAIAKFGLKDKVSHVSTGGGASLEFLEGKELPGIASI 394          
BLAST of DN617634 vs. ExPASy Swiss-Prot
Match: PGK_GEOSW (Phosphoglycerate kinase OS=Geobacillus sp. (strain WCH70) GN=pgk PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.640e-14
Identity = 37/48 (77.08%), Postives = 43/48 (89.58%), Query Frame = -3
Query:  372 TIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 515
            ++IGGGDS AAVEK GLA+KM HISTGGGASLE +EGK LPGV+AL+D
Sbjct:  346 SVIGGGDSAAAVEKFGLAEKMDHISTGGGASLEFMEGKQLPGVVALND 393          
BLAST of DN617634 vs. ExPASy Swiss-Prot
Match: PGK_CLONN (Phosphoglycerate kinase OS=Clostridium novyi (strain NT) GN=pgk PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.640e-14
Identity = 37/49 (75.51%), Postives = 42/49 (85.71%), Query Frame = -3
Query:  372 TTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 518
            TTIIGGGDS AAV ++G  DKM+HISTGGGASLE LEGK LPG++AL D
Sbjct:  349 TTIIGGGDSAAAVNQLGFGDKMTHISTGGGASLEFLEGKELPGIVALSD 397          
BLAST of DN617634 vs. ExPASy Swiss-Prot
Match: PGK_CLOAB (Phosphoglycerate kinase OS=Clostridium acetobutylicum GN=pgk PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.640e-14
Identity = 36/49 (73.47%), Postives = 43/49 (87.76%), Query Frame = -3
Query:  372 TTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 518
            TT+IGGGDS AAV ++G  DKM+HISTGGGASLE LEGK LPG++AL+D
Sbjct:  348 TTVIGGGDSAAAVNQLGFGDKMTHISTGGGASLEFLEGKELPGIVALND 396          
BLAST of DN617634 vs. ExPASy Swiss-Prot
Match: PGK_CHLP8 (Phosphoglycerate kinase OS=Chlorobaculum parvum (strain NCIB 8327) GN=pgk PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.640e-14
Identity = 36/51 (70.59%), Postives = 43/51 (84.31%), Query Frame = -3
Query:  372 GVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 524
            G  TIIGGGDS AA+ K GL+DK++H+STGGGASLE LEGK LPG+ AL+D
Sbjct:  347 GAITIIGGGDSAAAIAKAGLSDKVTHVSTGGGASLEFLEGKELPGIAALND 397          
BLAST of DN617634 vs. ExPASy Swiss-Prot
Match: PGK_BREBN (Phosphoglycerate kinase OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=pgk PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.640e-14
Identity = 38/49 (77.55%), Postives = 43/49 (87.76%), Query Frame = -3
Query:  372 TTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 518
            TTIIGGGDSVAAVEK G+A++M+HISTGGGASLE +EGK LPGV  L D
Sbjct:  344 TTIIGGGDSVAAVEKAGVAEQMTHISTGGGASLEFMEGKELPGVAVLAD 392          
BLAST of DN617634 vs. ExPASy Swiss-Prot
Match: PGK_BACHD (Phosphoglycerate kinase OS=Bacillus halodurans GN=pgk PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.640e-14
Identity = 37/48 (77.08%), Postives = 44/48 (91.67%), Query Frame = -3
Query:  372 TIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 515
            ++IGGGDS AAVEK GLA++MSHISTGGGASLE +EGK LPGV+AL+D
Sbjct:  346 SVIGGGDSAAAVEKFGLANQMSHISTGGGASLEFMEGKALPGVVALND 393          
The following BLAST results are available for this feature:
BLAST of DN617634 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 317
Match NameE-valueIdentityDescription
PGK_BACC49.615e-1577.08Phosphoglycerate kinase OS=Bacillus cereus (strain... [more]
PGK_BACC29.615e-1577.08Phosphoglycerate kinase OS=Bacillus cereus (strain... [more]
PGK_CARHZ1.256e-1472.55Phosphoglycerate kinase OS=Carboxydothermus hydrog... [more]
PGK_THEAB1.640e-1469.23Phosphoglycerate kinase OS=Thermosipho africanus (... [more]
PGK_GEOSW1.640e-1477.08Phosphoglycerate kinase OS=Geobacillus sp. (strain... [more]
PGK_CLONN1.640e-1475.51Phosphoglycerate kinase OS=Clostridium novyi (stra... [more]
PGK_CLOAB1.640e-1473.47Phosphoglycerate kinase OS=Clostridium acetobutyli... [more]
PGK_CHLP81.640e-1470.59Phosphoglycerate kinase OS=Chlorobaculum parvum (s... [more]
PGK_BREBN1.640e-1477.55Phosphoglycerate kinase OS=Brevibacillus brevis (s... [more]
PGK_BACHD1.640e-1477.08Phosphoglycerate kinase OS=Bacillus halodurans GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01H17_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001H17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617634 ID=DN617634; Name=DN617634; organism=Citrus sinensis; type=EST; length=538bp
AGTTTAATAGCATTCGTGAAGAATATTGCCTGAAAACATCATTCAAGAAA
CAATGGAAATATTGTAGTGCCAGGATTCATGCATTATCTAACAATCATCA
ACGGCTCATTGTGATCAGAAAGGAACAAGAACTTGACTTCAGGAAACTTA
TAGCCTTACCATCACAATGTTCCAAAATGGGATCAAATCCAGAAAAATGC
ATCACCATTGATGCCTGTGAGAAAGAATTTATTTTTACTCTTACAGCATC
TACAAAACCAACTCTAATGATAAAGTTTAACTTTTATCCACTCTGGGCTG
ACAACCAGCCACACATACAACTCTGGAAATGGCACATTTAAAAAAGGAAA
GTCCAGGAACTGGGTTTAAGCATCATCAAGAGCAAGCACACCAGGGAGTG
TTTTGCCCTCAAGGAGCTCTAAGCTGGCTCCACCTCCAGTGGAGATATGG
CTCATCTTGTCAGCCAGACCAACCTTCTCTACGGCTGCAACTGAGTCACC
TCCTCCAATGATTGTGGTCACTCCCTTCCCGCTGAGCT
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