DN617629 | Citrus Genome Database

Overview


Name	DN617629
Unique Name	DN617629
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	621

Libraries


Library Name	Type
Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
Csv1_Contig9095	contig	Csv1_Contig9095:40..663.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Homology

[Close]

BLAST of DN617629 vs. ExPASy Swiss-Prot
Match: ENOA_ANAPL (Alpha-enolase OS=Anas platyrhynchos GN=ENO1 PE=2 SV=2)

HSP 1 Score: 190.66 bits (483), Expect = 5.259e-48
Identity = 91/119 (76.47%), Postives = 105/119 (88.24%), Query Frame = -1

Query:  265 VQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAP 621
            +Q+VGDDL VTNPKR+ KA++EK CN LLLKVNQIGSVTES++A ++++  GWGVM SHRSGETEDTFIADL VGL TGQIKTGAPCRSERLAKYNQLLRIEEELG++A +AG  FR P
Sbjct:  313 IQVVGDDLTVTNPKRIAKAVEEKACNCLLLKVNQIGSVTESLQACKLAQSNGWGVMVSHRSGETEDTFIADLVVGLCTGQIKTGAPCRSERLAKYNQLLRIEEELGSKARFAGRNFRNP 431

[Close]

BLAST of DN617629 vs. ExPASy Swiss-Prot
Match: ENO_SCHMA (Enolase OS=Schistosoma mansoni GN=ENO PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.172e-47
Identity = 92/119 (77.31%), Postives = 103/119 (86.55%), Query Frame = -1

Query:  265 VQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAP 621
            +QIVGDDL VTNPKR+++AI  K CN LLLKVNQIGS+TESIEA ++++ +GWGVM SHRSGETEDTFIADL VGL TGQIKTGAPCRS+RLAKYNQLLRIEEELG  A YAG  FR P
Sbjct:  314 IQIVGDDLTVTNPKRIKQAIASKACNCLLLKVNQIGSLTESIEACKLAQDSGWGVMVSHRSGETEDTFIADLVVGLCTGQIKTGAPCRSDRLAKYNQLLRIEEELGTAAKYAGKNFRHP 432

[Close]

BLAST of DN617629 vs. ExPASy Swiss-Prot
Match: ENO_CHLRE (Enolase (Fragment) OS=Chlamydomonas reinhardtii GN=ENO PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.172e-47
Identity = 94/116 (81.03%), Postives = 105/116 (90.52%), Query Frame = -1

Query:  271 QIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFR 618
            Q+VGDD+LVTNP RV+KAI  K  NALLLKVNQIG++TESIEAVRM+K+AGWGVM SHRSGETED+FIADL+VGLA+GQIKTGAPCRSER AKYNQLLRIEEELG  AVYAG  +R
Sbjct:  253 QVVGDDILVTNPVRVKKAIDAKAVNALLLKVNQIGTITESIEAVRMAKEAGWGVMTSHRSGETEDSFIADLAVGLASGQIKTGAPCRSERNAKYNQLLRIEEELGENAVYAGESWR 368

[Close]

BLAST of DN617629 vs. ExPASy Swiss-Prot
Match: ENOG_CHICK (Gamma-enolase OS=Gallus gallus GN=ENO2 PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.172e-47
Identity = 91/119 (76.47%), Postives = 105/119 (88.24%), Query Frame = -1

Query:  265 VQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAP 621
            +QIVGDDL VTNPKR+E+A++EK CN LLLKVNQIGSVTE+I+A +++++ GWGVM SHRSGETEDTFIADL V L TGQIKTGAPCRSERLAKYNQL+RIEEELG EA +AG  FR P
Sbjct:  313 IQIVGDDLTVTNPKRIERAVEEKACNCLLLKVNQIGSVTEAIQACKLAQENGWGVMVSHRSGETEDTFIADLVVALCTGQIKTGAPCRSERLAKYNQLMRIEEELGDEARFAGHNFRNP 431

[Close]

BLAST of DN617629 vs. ExPASy Swiss-Prot
Match: ENOA_PONAB (Alpha-enolase OS=Pongo abelii GN=ENO1 PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.172e-47
Identity = 90/120 (75.00%), Postives = 106/120 (88.33%), Query Frame = -1

Query:  262 VQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPV 621
            +Q+VGDDL VTNPKR+ KA+ EK+CN LLLKVN+IGSVTES++A ++++  GWGVM SHRSGETEDTFIADL VGL TGQIKTGAPCRSERLAKYNQLLRIEEELG++A +AG  FR P+
Sbjct:  313 IQVVGDDLTVTNPKRIAKAVNEKSCNCLLLKVNRIGSVTESLQACKLAQANGWGVMVSHRSGETEDTFIADLVVGLCTGQIKTGAPCRSERLAKYNQLLRIEEELGSKAKFAGRNFRNPL 432

[Close]

BLAST of DN617629 vs. ExPASy Swiss-Prot
Match: ENO_FASHE (Enolase OS=Fasciola hepatica GN=ENO PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.530e-47
Identity = 93/119 (78.15%), Postives = 103/119 (86.55%), Query Frame = -1

Query:  265 VQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAP 621
            +QIVGDDL VTNP RV+KAI +K CN LLLKVNQIGSV+ESI+A +M+++AGWGVM SHRSGETED FIADL VGL TGQIKTGAPCRSERLAKYNQLLRIEE+LG  A YAG  FR P
Sbjct:  313 IQIVGDDLTVTNPLRVQKAIDQKACNCLLLKVNQIGSVSESIKACKMAQEAGWGVMVSHRSGETEDNFIADLVVGLRTGQIKTGAPCRSERLAKYNQLLRIEEDLGGAAKYAGENFRRP 431

[Close]

BLAST of DN617629 vs. ExPASy Swiss-Prot
Match: ENOB_RAT (Beta-enolase OS=Rattus norvegicus GN=Eno3 PE=1 SV=3)

HSP 1 Score: 189.119 bits (479), Expect = 1.530e-47
Identity = 91/119 (76.47%), Postives = 105/119 (88.24%), Query Frame = -1

Query:  265 VQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAP 621
            +QIVGDDL VTNPKR+ +A+++K CN LLLKVNQIGSVTESI+A ++++  GWGVM SHRSGETEDTFIADL VGL TGQIKTGAPCRSERLAKYNQL+RIEE LG +AV+AG KFR P
Sbjct:  313 IQIVGDDLTVTNPKRIAQAVEKKACNCLLLKVNQIGSVTESIQACKLAQSNGWGVMVSHRSGETEDTFIADLVVGLCTGQIKTGAPCRSERLAKYNQLMRIEEALGDKAVFAGRKFRNP 431

[Close]

BLAST of DN617629 vs. ExPASy Swiss-Prot
Match: ENOB_RABIT (Beta-enolase OS=Oryctolagus cuniculus GN=ENO3 PE=1 SV=4)

HSP 1 Score: 189.119 bits (479), Expect = 1.530e-47
Identity = 91/119 (76.47%), Postives = 105/119 (88.24%), Query Frame = -1

Query:  265 VQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAP 621
            +QIVGDDL VTNPKR+ +A+++K CN LLLKVNQIGSVTESI+A ++++  GWGVM SHRSGETEDTFIADL VGL TGQIKTGAPCRSERLAKYNQL+RIEE LG +AV+AG KFR P
Sbjct:  313 IQIVGDDLTVTNPKRIAQAVEKKACNCLLLKVNQIGSVTESIQACKLAQSNGWGVMVSHRSGETEDTFIADLVVGLCTGQIKTGAPCRSERLAKYNQLMRIEEALGDKAVFAGRKFRNP 431

[Close]

BLAST of DN617629 vs. ExPASy Swiss-Prot
Match: ENOB_MOUSE (Beta-enolase OS=Mus musculus GN=Eno3 PE=1 SV=3)

HSP 1 Score: 189.119 bits (479), Expect = 1.530e-47
Identity = 91/119 (76.47%), Postives = 105/119 (88.24%), Query Frame = -1

Query:  265 VQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAP 621
            +QIVGDDL VTNPKR+ +A+++K CN LLLKVNQIGSVTESI+A ++++  GWGVM SHRSGETEDTFIADL VGL TGQIKTGAPCRSERLAKYNQL+RIEE LG +AV+AG KFR P
Sbjct:  313 IQIVGDDLTVTNPKRIAQAVEKKACNCLLLKVNQIGSVTESIQACKLAQSNGWGVMVSHRSGETEDTFIADLVVGLCTGQIKTGAPCRSERLAKYNQLMRIEEALGDKAVFAGRKFRNP 431

[Close]

BLAST of DN617629 vs. ExPASy Swiss-Prot
Match: ENOB_BOVIN (Beta-enolase OS=Bos taurus GN=ENO3 PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.530e-47
Identity = 91/119 (76.47%), Postives = 105/119 (88.24%), Query Frame = -1

Query:  265 VQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAP 621
            +QIVGDDL VTNPKR+ +A+++K CN LLLKVNQIGSVTESI+A ++++  GWGVM SHRSGETEDTFIADL VGL TGQIKTGAPCRSERLAKYNQL+RIEE LG +AV+AG KFR P
Sbjct:  313 IQIVGDDLTVTNPKRIAQAVEKKACNCLLLKVNQIGSVTESIQACKLAQSNGWGVMVSHRSGETEDTFIADLVVGLCTGQIKTGAPCRSERLAKYNQLMRIEEALGDKAVFAGRKFRNP 431

The following BLAST results are available for this feature:

BLAST of DN617629 vs. ExPASy Swiss-Prot

BLAST of DN617629 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500


Match Name	E-value	Identity	Description
ENOA_ANAPL	5.259e-48	76.47	Alpha-enolase OS=Anas platyrhynchos GN=ENO1 PE=2 S...	[more]
ENO_SCHMA	1.172e-47	77.31	Enolase OS=Schistosoma mansoni GN=ENO PE=2 SV=1	[more]
ENO_CHLRE	1.172e-47	81.03	Enolase (Fragment) OS=Chlamydomonas reinhardtii GN...	[more]
ENOG_CHICK	1.172e-47	76.47	Gamma-enolase OS=Gallus gallus GN=ENO2 PE=2 SV=1	[more]
ENOA_PONAB	1.172e-47	75.00	Alpha-enolase OS=Pongo abelii GN=ENO1 PE=2 SV=1	[more]
ENO_FASHE	1.530e-47	78.15	Enolase OS=Fasciola hepatica GN=ENO PE=2 SV=1	[more]
ENOB_RAT	1.530e-47	76.47	Beta-enolase OS=Rattus norvegicus GN=Eno3 PE=1 SV=...	[more]
ENOB_RABIT	1.530e-47	76.47	Beta-enolase OS=Oryctolagus cuniculus GN=ENO3 PE=1...	[more]
ENOB_MOUSE	1.530e-47	76.47	Beta-enolase OS=Mus musculus GN=Eno3 PE=1 SV=3	[more]
ENOB_BOVIN	1.530e-47	76.47	Beta-enolase OS=Bos taurus GN=ENO3 PE=2 SV=1	[more]

Pages

Properties


Property Name	Value
Genbank description	UCRCS11_01H14_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001H14, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>DN617629 ID=DN617629; Name=DN617629; organism=Citrus sinensis; type=EST; length=621bp
TTTTTTTTCTAATAAGAAAGAAACAATGCCTTAGCACCGCAACTAGATAC
TCATTTTAATAAAACATGCTCTAGGAAATGGTTCCTCATACAGCAAGGTT
CAAGCTCTCAGACAAAAACTGTGTCAAAATTATTGAGGAAATATCTTGGG
TCACAAAATGCTAAAAACCCATAAAAATCCATTTTACATAACTTATTGAA
GTACTCCATTGCTCAAATCCAGCACCACACCAGATCAGCATCTCAAACTC
TAGTAGGGTTCAACAGGGGCACGGAACTTGGCACCAGCATAAACTGCTTC
AGCACCGAGCTCTTCTTCAATTCTCAGAAGCTGATTATACTTTGCAAGGC
GCTCTGACCTGCATGGTGCTCCTGTCTTAATTTGACCCGTGGCCAAGCCC
ACTGAGAGATCGGCAATGAAAGTATCTTCAGTCTCACCACTGCGGTGGCT
GGCCATCACACCCCACCCAGCTTGCTTGGACATTCTGACGGCTTCAATGC
TCTCAGTTACAGATCCAATTTGATTAACCTTGAGAAGGAGGGCGTTGCAG
GTCTTCTCTTTGATAGCCTTCTCAACCCTCTTAGGATTGGTGACCAAAAG
ATCATCTCCAACAATTTGTAC