DN617623

Overview
NameDN617623
Unique NameDN617623
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length682
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8110 contig Csv1_Contig8110:84..765. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617623 vs. ExPASy Swiss-Prot
Match: ADHX_DROME (Alcohol dehydrogenase class-3 OS=Drosophila melanogaster GN=Fdh PE=1 SV=3)

HSP 1 Score: 69.3218 bits (168), Expect = 2.112e-11
Identity = 46/151 (30.46%), Postives = 67/151 (44.37%), Query Frame = 2
Query:  161 DVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASK-----------------YHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVY 562
            +V  K+T  G+CH+D   +       ++P+V GHE  G+V  VG  V+ FK GD V +   +  C  C  C     N C K+ +T  +                  +  GT T+  Y  T+VAD   + +I E APL+    L C   T Y
Sbjct:   37 EVRIKITATGVCHTDAFTLSGADPEGLFPVVLGHEGAGIVESVGEGVTNFKAGDHV-IALYIPQCNECKFCKSGKTNLCQKIRLTQGAGVMPEGTSRLSCKGQQLFHFMGTSTFAEY--TVVADIS-LTKINEKAPLEKVCLLGCGISTGY 183          
BLAST of DN617623 vs. ExPASy Swiss-Prot
Match: ADH4_STRCA (Alcohol dehydrogenase 4 OS=Struthio camelus GN=ADH4 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.112e-11
Identity = 46/154 (29.87%), Postives = 67/154 (43.51%), Query Frame = 2
Query:  155 EKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKV--IMTYASKYH---DGTITY-------------GGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVY 562
            + +V  K+   G+C +D H I   +   ++P++ GHE  G+V  +G  VSKFK GDKV +   +  C  C  C     N C K+  I T  S      DGT  +               +S+  V  E  + +I   APLD    + C   T Y
Sbjct:   33 DHEVRVKIVATGVCRTDEHAINPSFKEGVFPVILGHEGAGIVESIGQGVSKFKPGDKV-IPLYMPQCGHCKFCLNPKTNLCEKISKIKTPISDQEVMSDGTSRFTCKGKPIYHFMGTSTFSEYTVVSESSLAKIDAAAPLDKVCLIGCGFSTGY 185          
BLAST of DN617623 vs. ExPASy Swiss-Prot
Match: ADH1B_UROHA (Alcohol dehydrogenase 1B OS=Uromastyx hardwickii PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 2.758e-11
Identity = 49/148 (33.11%), Postives = 68/148 (45.95%), Query Frame = 2
Query:  161 DVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPK-VIMTYASKYHDGT--ITY-----------GGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVY 562
            +V  K+   GIC SD H++        +PI+ GHE  GVV  VG  V+  K GDKV +   +  C  C+SC     N C K  +  +    +DGT   TY           G +++  VA E  VV+I   APL+    + C   T Y
Sbjct:   35 EVRIKILASGICRSDDHVLSGAL-KVNFPIILGHEAAGVVESVGEGVTSMKPGDKV-IPIFLPQCGECNSCRHPRGNVCKKSELGPFTGLLYDGTSRFTYQGKPVYHFVRTGTFTEYTVAPEDSVVKIDASAPLEKVCLIGCGFSTGY 180          
BLAST of DN617623 vs. ExPASy Swiss-Prot
Match: ADHL_GADMO (Alcohol dehydrogenase class-3 chain L OS=Gadus morhua PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.602e-11
Identity = 46/148 (31.08%), Postives = 68/148 (45.95%), Query Frame = 2
Query:  161 DVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTY--------ASKYH-DGTITY-----GGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVY 562
            +V  K+   GICH+D + +       ++P V GHE  G+V  VG  V+KFK GD V +   V  C  C  C     N C K+ +T          S++  +G + +       +S+  V  E  + ++ E APLD    L CA  T Y
Sbjct:   35 EVRIKIVATGICHTDAYTLSGSDPEGVFPSVLGHEGAGIVESVGEGVTKFKSGDAV-IPLYVPQCGECKFCKNPKTNLCQKIRLTQGKGLMPNGTSRFSCNGQVLFHFMGSSTFSEYTVVAEISLAKVHEKAPLDKVCLLGCAISTGY 181          
BLAST of DN617623 vs. ExPASy Swiss-Prot
Match: ADH7_MOUSE (Alcohol dehydrogenase class 4 mu/sigma chain OS=Mus musculus GN=Adh7 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.602e-11
Identity = 44/148 (29.73%), Postives = 68/148 (45.95%), Query Frame = 2
Query:  158 KDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITY-------------GGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVY 562
            K+V  K+   GIC +D H+IK    +  +P++ GHE VGVV  VG  V+  + GDKV +   +  CR C++C     N C +  +T      DGT  +               +++  V DE  V ++   AP +    + C   T Y
Sbjct:   35 KEVRVKILATGICRTDDHIIKGSMVSK-FPVIVGHEAVGVVESVGEGVTTVRPGDKV-IPLFLPQCRECNACLNPEGNLCIRSDLTGCGVLADGTTRFTCKGKPVQHFMNTSTFTEYTVLDESSVAKVDGAAPPEKACLIGCGFSTGY 180          
The following BLAST results are available for this feature:
BLAST of DN617623 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 105
Match NameE-valueIdentityDescription
ADHX_DROME2.112e-1130.46Alcohol dehydrogenase class-3 OS=Drosophila melano... [more]
ADH4_STRCA2.112e-1129.87Alcohol dehydrogenase 4 OS=Struthio camelus GN=ADH... [more]
ADH1B_UROHA2.758e-1133.11Alcohol dehydrogenase 1B OS=Uromastyx hardwickii P... [more]
ADHL_GADMO3.602e-1131.08Alcohol dehydrogenase class-3 chain L OS=Gadus mor... [more]
ADH7_MOUSE3.602e-1129.73Alcohol dehydrogenase class 4 mu/sigma chain OS=Mu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01H11_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001H11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617623 ID=DN617623; Name=DN617623; organism=Citrus sinensis; type=EST; length=682bp
GTCAAACTAAGCCAACAAGCACCAATATCATTAAATTCATTCTGAAATGG
GGCAAGCACCGGAGCAAGAGCACCCTAAGAACGCCTTTGGATGGGCTGCC
AGGGACACTTCTGGCGTTCTCTCCCCCTTTCACTTCTCCAGAAGAGCAAC
GGGAGAGAAGGATGTGACATTCAAAGTAACTCACTGTGGGATATGCCATT
CAGATCTTCACTTGATCAAAAATGAATGGGGCAATGCCATTTACCCAATC
GTCCCCGGACATGAGATTGTGGGCGTAGTGACAGAGGTCGGAAGCAAAGT
GAGTAAATTCAAAGTCGGAGACAAAGTGGGAGTAGGATGCATGGTGGGAT
CATGCCGCTCTTGTGATAGCTGCGCCATTGATCTTGAGAACTACTGCCCC
AAAGTTATAATGACCTATGCCAGCAAGTACCATGATGGAACCATCACATA
CGGAGGCTACTCTGACACTATGGTTGCCGATGAGCACTTTGTGGTCCGTA
TTCCTGAAGGCGCACCACTTGACGCCACTGCCCCTCTCCTCTGTGCTGGT
ATCACAGTCTACAGTCCGTTGAGATTCTATGGACTCGACAAGCCTGGTAT
GCATGTGGGTGTTGTCGGCTTGGGCGGTCTAGGCCATGTCGCTGTCAAAT
TCGCAAAGGCTATGGGGGTTAAGGTGACTGTG
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