DN617623

Overview
NameDN617623
Unique NameDN617623
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length682
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8110 contig Csv1_Contig8110:84..765. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617623 vs. ExPASy Swiss-Prot
Match: CADH7_ORYSJ (Cinnamyl alcohol dehydrogenase 7 OS=Oryza sativa subsp. japonica GN=CAD7 PE=2 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 2.012e-62
Identity = 119/219 (54.34%), Postives = 143/219 (65.30%), Query Frame = 2
Query:   53 QAPEQEHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCP-KVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGA--------PLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTV 682
            QAP  +H + A G AA D SG L+P   SRR TG+ DV  KV +CGICHSDLH IKNEW NA+YP+V GHEI GVVTEVG  V++FK GD+VGVGCMV +C  C+SC    ENYC   V+ TY S   DGT TYGGYSD +V  + FVVR P  A        PLD+ APLLCAG+TVY+P+R +GL + G                KFA+A G++VTV
Sbjct:   13 QAPPPQHTRKAVGLAAHDDSGHLTPIRISRRKTGDDDVAIKVLYCGICHSDLHTIKNEWRNAVYPVVAGHEITGVVTEVGKNVARFKAGDEVGVGCMVNTCGGCESCRDGCENYCSGGVVFTYNSVDRDGTRTYGGYSDAVVVSQRFVVRFPSSAGGGAGAALPLDSGAPLLCAGVTVYAPMRQHGLCEAGKHVGVVGLGGLGHVAVKFARAFGMRVTV 231          
BLAST of DN617623 vs. ExPASy Swiss-Prot
Match: CADH6_ORYSJ (Probable cinnamyl alcohol dehydrogenase 6 OS=Oryza sativa subsp. japonica GN=CAD6 PE=2 SV=2)

HSP 1 Score: 233.417 bits (594), Expect = 8.455e-61
Identity = 112/207 (54.11%), Postives = 137/207 (66.18%), Query Frame = 2
Query:   71 HPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGL---DKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTV 682
            H +   GWAA D SG + PF F RR  G  DVT KV +CG+CH+DLH I N+WG  +YP+VPGHEI GVVT+VG+ V+ FKVGD+VGVGC+  SC  C+ C    ENYC KV +TY   + DG+ITYGGYS  +VA + FVVRIP+  PLDA APLLCAGITVYSP++ +G+   D  G                KF KA G+ VTV
Sbjct:    7 HTQTVSGWAAMDESGKIVPFVFKRRENGVDDVTIKVKYCGMCHTDLHFIHNDWGITMYPVVPGHEITGVVTKVGTNVAGFKVGDRVGVGCIAASCLDCEHCRRSEENYCDKVALTYNGIFWDGSITYGGYSGMLVAHKRFVVRIPDTLPLDAAAPLLCAGITVYSPMKQHGMLQADAAGRRLGVVGLGGLGHVAVKFGKAFGLHVTV 213          
BLAST of DN617623 vs. ExPASy Swiss-Prot
Match: CADH2_PICAB (Probable cinnamyl alcohol dehydrogenase 2 OS=Picea abies GN=CAD2 PE=3 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 4.196e-60
Identity = 111/205 (54.15%), Postives = 141/205 (68.78%), Query Frame = 2
Query:   68 EHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTV 682
            E  K   G+AARD+SG LSP+ ++ R  G +DV  +V +CGICHSDL  + NE G + YP+VPGHE+VGVVTE+GS+V KFKVG+ VGVGC+VGSCRSC +C   +E YC K I TY    HDGT T GG++ +MV D+ FVVRIPE  PL+  APLLCAG+TVYSP++ +G+ +PG                K AKA G+ VTV
Sbjct:    5 ESEKTVTGYAARDSSGHLSPYTYTLRNKGPEDVIVRVIYCGICHSDLVQMHNEMGMSNYPMVPGHEVVGVVTEIGSEVKKFKVGEHVGVGCIVGSCRSCSNCNGSMEQYCSKRIWTYNDVNHDGTPTQGGFASSMVVDQMFVVRIPENLPLEQAAPLLCAGVTVYSPMKHFGMTEPGKKCGILGLGGVGHMGVKIAKAFGLHVTV 209          
BLAST of DN617623 vs. ExPASy Swiss-Prot
Match: CADH9_ORYSJ (Probable cinnamyl alcohol dehydrogenase 9 OS=Oryza sativa subsp. japonica GN=CAD9 PE=2 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 7.157e-60
Identity = 110/212 (51.89%), Postives = 140/212 (66.04%), Query Frame = 2
Query:   65 QEHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEG------APLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTV 682
            ++ PK   GWAARD +G+LSPF +  RA G++DV  K+  CGICHSDL  IKNEWGNA YP+VPGHEIVGVV EVGS V++F  GD VGVG +  +CR+C +C    ENYC  ++ ++ +   DG   +GG+S+  V ++ +VVRIP G      APLD  APLLCAG+TVY P+R  GLD+PG+               KF KA GVKVTV
Sbjct:    2 EQQPKMVTGWAARDANGLLSPFSYPLRAKGDEDVVVKILFCGICHSDLSTIKNEWGNAKYPVVPGHEIVGVVAEVGSSVARFAAGDTVGVGYIASTCRACANCRDGFENYCAGLVPSFNAALPDGATVHGGFSELAVVNQRYVVRIPGGGGGASPAPLDRLAPLLCAGVTVYCPMRRLGLDRPGVHLGVAGLGGLGHLAVKFGKAFGVKVTV 213          
BLAST of DN617623 vs. ExPASy Swiss-Prot
Match: CADH7_PICAB (Probable cinnamyl alcohol dehydrogenase 7/8 OS=Picea abies GN=CAD7 PE=2 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 9.348e-60
Identity = 110/205 (53.66%), Postives = 141/205 (68.78%), Query Frame = 2
Query:   68 EHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTV 682
            E  +   G+AARD+SG LSP+ ++ R  G +DV  +V +CGICHSDL  + NE G + YP+VPGHE+VGVVTE+GS+V KFKVG+ VGVGC+VGSCRSC +C   +E YC K I TY    HDGT T GG++ +MV D+ FVVRIPE  PL+  APLLCAG+TVYSP++ +G+ +PG                K AKA G+ VTV
Sbjct:    5 ESERTVTGYAARDSSGHLSPYTYTLRNKGPEDVIVRVIYCGICHSDLVQMHNEMGMSNYPMVPGHEVVGVVTEIGSEVKKFKVGEHVGVGCIVGSCRSCSNCNGSMEQYCSKRIWTYNDVNHDGTPTQGGFASSMVVDQMFVVRIPENLPLEQAAPLLCAGVTVYSPMKHFGMTEPGKKCGILGLGGVGHMGVKIAKAFGLHVTV 209          
BLAST of DN617623 vs. ExPASy Swiss-Prot
Match: CADH_PINTA (Probable cinnamyl alcohol dehydrogenase OS=Pinus taeda PE=2 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.221e-59
Identity = 109/205 (53.17%), Postives = 141/205 (68.78%), Query Frame = 2
Query:   68 EHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTV 682
            E  K   G+AARD+SG LSP+ ++ R  G +DV  KV +CGICHSDL  ++NE G + YP+VPGHE+VG+VTE+GS+V KFKVG+ VGVGC+VGSCRSC +C   +E YC K I TY    HDGT T GG++ +MV D+ FVVRIPE  PL+  APLLCAG+TV+SP++ + + +PG                K AKA G+ VTV
Sbjct:    5 ESEKTVTGYAARDSSGHLSPYTYNLRKKGPEDVIVKVIYCGICHSDLVQMRNEMGMSHYPMVPGHEVVGIVTEIGSEVKKFKVGEHVGVGCIVGSCRSCGNCNQSMEQYCSKRIWTYNDVNHDGTPTQGGFASSMVVDQMFVVRIPENLPLEQAAPLLCAGVTVFSPMKHFAMTEPGKKCGILGLGGVGHLGVKIAKAFGLHVTV 209          
BLAST of DN617623 vs. ExPASy Swiss-Prot
Match: CADH_PINRA (Probable cinnamyl alcohol dehydrogenase OS=Pinus radiata GN=CAD PE=2 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 1.594e-59
Identity = 109/205 (53.17%), Postives = 141/205 (68.78%), Query Frame = 2
Query:   68 EHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTV 682
            E  K   G+AARD+SG LSP+ ++ R  G +DV  KV +CGICHSDL  ++NE G + YP+VPGHE+VG+VTE+GS+V KFKVG+ VGVGC+VGSCRSC +C   +E YC K I TY    HDGT T GG++ +MV D+ FVVRIPE  PL+  APLLCAG+TV+SP++ + + +PG                K AKA G+ VTV
Sbjct:    5 ETEKTVTGYAARDSSGHLSPYTYNLRKKGPEDVIVKVIYCGICHSDLVQMRNEMGMSHYPMVPGHEVVGIVTEIGSEVKKFKVGEHVGVGCIVGSCRSCGNCNQSMEQYCSKRIWTYNDVNHDGTPTQGGFASSMVVDQMFVVRIPENLPLEQAAPLLCAGVTVFSPMKHFAMTEPGKKCGILGLGGVGHMGVKIAKAFGLHVTV 209          
BLAST of DN617623 vs. ExPASy Swiss-Prot
Match: CADH4_ARATH (Cinnamyl alcohol dehydrogenase 4 OS=Arabidopsis thaliana GN=CAD4 PE=1 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 3.007e-58
Identity = 111/202 (54.95%), Postives = 136/202 (67.33%), Query Frame = 2
Query:   77 KNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTV 682
            K A GWAARD SGVLSP+ ++ R+TG  DV  KV  CGICH+D+H IKN+ G + YP+VPGHE+VG V EVGS VSKF VGD VGVG +VG C SC  C+ +LE YC K I +Y   Y DG  T GG++DTM+ ++ FVV+IPEG  ++  APLLCAG+TVYSPL  +GL   G+               K AKAMG  VTV
Sbjct:    9 KKALGWAARDPSGVLSPYSYTLRSTGADDVYIKVICCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVLEVGSDVSKFTVGDVVGVGVVVGCCGSCKPCSSELEQYCNKRIWSYNDVYTDGKPTQGGFADTMIVNQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGLMASGLKGGILGLGGVGHMGVKIAKAMGHHVTV 210          
BLAST of DN617623 vs. ExPASy Swiss-Prot
Match: CADH2_TOBAC (Probable cinnamyl alcohol dehydrogenase 2 OS=Nicotiana tabacum GN=CAD19 PE=1 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 5.129e-58
Identity = 108/202 (53.47%), Postives = 137/202 (67.82%), Query Frame = 2
Query:   77 KNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTV 682
            K+A GWAARD SG+LSP+ ++ R TG +DV  KV +CG+CHSDLH +KN+ G + YP+VPGHE+VG V EVG+ VSKFKVGD VGVG +VGSCR+C  C  ++E YC K I      Y DG  T GG++++MV D++FVV+IPEG   +  APLLCAGITVYSP   +G ++ G                K AKAMG  VTV
Sbjct:    8 KSAIGWAARDPSGLLSPYTYTLRNTGPEDVQVKVLYCGLCHSDLHQVKNDLGMSNYPLVPGHEVVGKVVEVGADVSKFKVGDTVGVGLLVGSCRNCGPCKREIEQYCNKKIWNCNDVYTDGKPTQGGFANSMVVDQNFVVKIPEGMAPEQAAPLLCAGITVYSPFNHFGFNQSGFRGGILGLGGVGHMGVKIAKAMGHHVTV 209          
BLAST of DN617623 vs. ExPASy Swiss-Prot
Match: CADH1_TOBAC (Probable cinnamyl alcohol dehydrogenase 1 OS=Nicotiana tabacum GN=CAD14 PE=1 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 8.749e-58
Identity = 110/205 (53.66%), Postives = 134/205 (65.37%), Query Frame = 2
Query:   68 EHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTV 682
            E  K   GWAARD SGVLSP+ ++ R TG +DV  KV +CG+CH+DLH +KN+ G + YP+VPGHE+VG V EVG  VSKFKVGD VGVG +VGSCR+C  C  D+E YC K I      Y DG  T GG++ +MV D+ FVV+IPEG   +  APLLCAGITVYSPL  +G  + G+               K AKAMG  VTV
Sbjct:    5 EVEKTTIGWAARDPSGVLSPYTYTLRNTGPEDVEVKVLYCGLCHTDLHQVKNDLGMSNYPLVPGHEVVGEVVEVGPDVSKFKVGDTVGVGLLVGSCRNCGPCKRDIEQYCNKKIWNCNDVYTDGKPTQGGFAKSMVVDQKFVVKIPEGMAPEQAAPLLCAGITVYSPLNHFGFKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTV 209          
The following BLAST results are available for this feature:
BLAST of DN617623 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 105
Match NameE-valueIdentityDescription
CADH7_ORYSJ2.012e-6254.34Cinnamyl alcohol dehydrogenase 7 OS=Oryza sativa s... [more]
CADH6_ORYSJ8.455e-6154.11Probable cinnamyl alcohol dehydrogenase 6 OS=Oryza... [more]
CADH2_PICAB4.196e-6054.15Probable cinnamyl alcohol dehydrogenase 2 OS=Picea... [more]
CADH9_ORYSJ7.157e-6051.89Probable cinnamyl alcohol dehydrogenase 9 OS=Oryza... [more]
CADH7_PICAB9.348e-6053.66Probable cinnamyl alcohol dehydrogenase 7/8 OS=Pic... [more]
CADH_PINTA1.221e-5953.17Probable cinnamyl alcohol dehydrogenase OS=Pinus t... [more]
CADH_PINRA1.594e-5953.17Probable cinnamyl alcohol dehydrogenase OS=Pinus r... [more]
CADH4_ARATH3.007e-5854.95Cinnamyl alcohol dehydrogenase 4 OS=Arabidopsis th... [more]
CADH2_TOBAC5.129e-5853.47Probable cinnamyl alcohol dehydrogenase 2 OS=Nicot... [more]
CADH1_TOBAC8.749e-5853.66Probable cinnamyl alcohol dehydrogenase 1 OS=Nicot... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01H11_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001H11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617623 ID=DN617623; Name=DN617623; organism=Citrus sinensis; type=EST; length=682bp
GTCAAACTAAGCCAACAAGCACCAATATCATTAAATTCATTCTGAAATGG
GGCAAGCACCGGAGCAAGAGCACCCTAAGAACGCCTTTGGATGGGCTGCC
AGGGACACTTCTGGCGTTCTCTCCCCCTTTCACTTCTCCAGAAGAGCAAC
GGGAGAGAAGGATGTGACATTCAAAGTAACTCACTGTGGGATATGCCATT
CAGATCTTCACTTGATCAAAAATGAATGGGGCAATGCCATTTACCCAATC
GTCCCCGGACATGAGATTGTGGGCGTAGTGACAGAGGTCGGAAGCAAAGT
GAGTAAATTCAAAGTCGGAGACAAAGTGGGAGTAGGATGCATGGTGGGAT
CATGCCGCTCTTGTGATAGCTGCGCCATTGATCTTGAGAACTACTGCCCC
AAAGTTATAATGACCTATGCCAGCAAGTACCATGATGGAACCATCACATA
CGGAGGCTACTCTGACACTATGGTTGCCGATGAGCACTTTGTGGTCCGTA
TTCCTGAAGGCGCACCACTTGACGCCACTGCCCCTCTCCTCTGTGCTGGT
ATCACAGTCTACAGTCCGTTGAGATTCTATGGACTCGACAAGCCTGGTAT
GCATGTGGGTGTTGTCGGCTTGGGCGGTCTAGGCCATGTCGCTGTCAAAT
TCGCAAAGGCTATGGGGGTTAAGGTGACTGTG
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