DN617620
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617620 vs. ExPASy Swiss-Prot
Match: RL9_BOVIN (60S ribosomal protein L9 OS=Bos taurus GN=RPL9 PE=2 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 1.914e-37 Identity = 80/120 (66.67%), Postives = 89/120 (74.17%), Query Frame = -1 Query: 263 AAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKSTI 622 A +RT SHV N+I GVT G+RYKMR VYAHFPIN I N +EIRNFLGEK +R+V M GV S KDEL+L+GNDIELVS SAALI Q VKNKDIRKFLDGIYVSEK T+ Sbjct: 68 ATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRPGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTV 187
BLAST of DN617620 vs. ExPASy Swiss-Prot
Match: RL9_ICTPU (60S ribosomal protein L9 OS=Ictalurus punctatus GN=rpl9 PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 3.265e-37 Identity = 81/124 (65.32%), Postives = 90/124 (72.58%), Query Frame = -1 Query: 251 AAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKSTILGEE 622 A +RT SHV N+I GVT G+RYKMR VYAHFPIN I +EIRNFLGEK +R+V M GV S KDELVL+GNDIELVS SAALI Q VKNKDIRKFLDGIYVSEK T++ E Sbjct: 68 ATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQETGSLVEIRNFLGEKYIRRVRMRPGVNCALSAAQKDELVLEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTVVEPE 191
BLAST of DN617620 vs. ExPASy Swiss-Prot
Match: RL9_PONAB (60S ribosomal protein L9 OS=Pongo abelii GN=RPL9 PE=2 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 4.265e-37 Identity = 80/120 (66.67%), Postives = 88/120 (73.33%), Query Frame = -1 Query: 263 AAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKSTI 622 A +RT SHV N+I GVT G+RYKMR VYAHFPIN I N +EIRNFLGEK +R+V M GV S KDEL+L GNDIELVS SAALI Q VKNKDIRKFLDGIYVSEK T+ Sbjct: 68 ATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRPGVACSVSQAQKDELILGGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTV 187
BLAST of DN617620 vs. ExPASy Swiss-Prot
Match: RL9_DICDI (60S ribosomal protein L9 OS=Dictyostelium discoideum GN=rpl9 PE=1 SV=2) HSP 1 Score: 151.754 bits (382), Expect = 2.764e-36 Identity = 69/120 (57.50%), Postives = 94/120 (78.33%), Query Frame = -1 Query: 263 AAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKSTI 622 A I+T S + N+ITGVTKGY YKMRFVYAHFPIN ++ + + +EIRNF GEK VR++++LDG+T R++K KDE+VL GN +EL+S+S A I + +K KD+RKFLDGIYVSE++ + Sbjct: 66 ACIKTITSIIENMITGVTKGYEYKMRFVYAHFPINVAVTDGGRVVEIRNFFGEKIVRRIELLDGITCYRNEKAKDEIVLTGNSLELLSQSCATIQLRSAIKYKDVRKFLDGIYVSERNVL 185
BLAST of DN617620 vs. ExPASy Swiss-Prot
Match: RL9_CAEEL (60S ribosomal protein L9 OS=Caenorhabditis elegans GN=rpl-9 PE=1 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 4.715e-36 Identity = 74/121 (61.16%), Postives = 94/121 (77.69%), Query Frame = -1 Query: 260 AAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKSTIL 622 AAIRT SH+ N+I GVT G+RYKMR VYAHFPIN ++ + N+ +EIRNFLGEK VR+V + +GV S KDE+V++GND++ VS++AA I Q VK KDIRKFLDGIYVSEK+TI+ Sbjct: 66 AAIRTVCSHIKNMIKGVTVGFRYKMRSVYAHFPINVTLQDGNRTVEIRNFLGEKIVRRVPLPEGVIATISTAQKDEIVVEGNDVQFVSQAAARIQQSTAVKEKDIRKFLDGIYVSEKTTIV 186
BLAST of DN617620 vs. ExPASy Swiss-Prot
Match: RL9B_YEAST (60S ribosomal protein L9-B OS=Saccharomyces cerevisiae GN=RPL9B PE=1 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 6.158e-36 Identity = 77/123 (62.60%), Postives = 95/123 (77.24%), Query Frame = -1 Query: 260 AAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNN--KAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKSTIL 622 AA+RT S V N+ITGVTKGY+YKMR+VYAHFPIN +I + K IE+RNFLG+KK+R V + DGVT+ S VKDE+VL GN +E VS++AA + Q C V+NKDIRKFLDGIYVS K I+ Sbjct: 66 AALRTVKSLVDNMITGVTKGYKYKMRYVYAHFPINVNIVEKDGAKFIEVRNFLGDKKIRNVPVRDGVTIEFSTNVKDEIVLSGNSVEDVSQNAADLQQICRVRNKDIRKFLDGIYVSHKGFIV 188
BLAST of DN617620 vs. ExPASy Swiss-Prot
Match: RL9A_YEAST (60S ribosomal protein L9-A OS=Saccharomyces cerevisiae GN=RPL9A PE=1 SV=2) HSP 1 Score: 150.214 bits (378), Expect = 8.043e-36 Identity = 77/122 (63.11%), Postives = 94/122 (77.05%), Query Frame = -1 Query: 263 AAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNN--KAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKSTI 622 AA+RT S V N+ITGVTKGY+YKMR+VYAHFPIN +I + K IE+RNFLG+KK+R V + DGVT+ S VKDE+VL GN +E VS++AA + Q C V+NKDIRKFLDGIYVS K I Sbjct: 66 AALRTVKSLVDNMITGVTKGYKYKMRYVYAHFPINVNIVEKDGAKFIEVRNFLGDKKIRNVPVRDGVTIEFSTNVKDEIVLSGNSVEDVSQNAADLQQICRVRNKDIRKFLDGIYVSHKGFI 187
BLAST of DN617620 vs. ExPASy Swiss-Prot
Match: RL9B_SCHPO (60S ribosomal protein L9-B OS=Schizosaccharomyces pombe GN=rpl9b PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 1.792e-35 Identity = 73/121 (60.33%), Postives = 92/121 (76.03%), Query Frame = -1 Query: 263 SAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKSTI 625 +A IRTA S + N+I GVT+G+RYKMR VYAHFPIN ++ N +EIRNFLGE+ R + L GVTV S VKDE++++GN +E VS+SAA I Q C+V+NKDIRKFLDGIYVSE+ I Sbjct: 65 NACIRTAYSIINNMIIGVTQGFRYKMRLVYAHFPININLTENGTVVEIRNFLGERITRVIKCLPGVTVSISSAVKDEIIIEGNSLENVSQSAANIKQICNVRNKDIRKFLDGIYVSERGNI 185
BLAST of DN617620 vs. ExPASy Swiss-Prot
Match: RL9A_SCHPO (60S ribosomal protein L9-A OS=Schizosaccharomyces pombe GN=rpl9a PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 8.892e-35 Identity = 72/121 (59.50%), Postives = 91/121 (75.21%), Query Frame = -1 Query: 263 SAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKSTI 625 +A IR+ S + N+I GVT+G+RYKMR VYAHFPIN ++ N +EIRNFLGE+ R + L GVTV S VKDE++L+GN +E VS+SAA I Q C+V+NKDIRKFLDGIYVSE+ I Sbjct: 65 NACIRSVYSIINNMIIGVTQGFRYKMRLVYAHFPININLTENGTVVEIRNFLGERITRVIKCLPGVTVSISSAVKDEIILEGNSLENVSQSAANIKQICNVRNKDIRKFLDGIYVSERGNI 185
BLAST of DN617620 vs. ExPASy Swiss-Prot
Match: RL6_HYPBU (50S ribosomal protein L6P OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=rpl6p PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 7.808e-23 Identity = 57/118 (48.31%), Postives = 80/118 (67.80%), Query Frame = -1 Query: 272 AAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKV-KDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEK 622 A + T +H+ N+ITGVTKG+RYK++ VY+HFP+ + + IE NFLGEK R ++ GVTV KV KD+++++G DIE V ++AA I Q VK+KD R F+DGIY+ EK Sbjct: 71 ALVGTIAAHIENMITGVTKGFRYKLKIVYSHFPVTVKVQGDKVVIE--NFLGEKAPRIAKIMPGVTV----KVQKDDVIVEGIDIEAVGQTAANIEQATKVKDKDRRVFIDGIYIYEK 182 The following BLAST results are available for this feature:
BLAST of DN617620 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DN617620 ID=DN617620; Name=DN617620; organism=Citrus sinensis; type=EST; length=628bpback to top |