DN617619

Overview
NameDN617619
Unique NameDN617619
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length677
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617619 vs. ExPASy Swiss-Prot
Match: C99A1_SORBI (Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bicolor GN=CYP99A1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.036e-11
Identity = 41/127 (32.28%), Postives = 67/127 (52.76%), Query Frame = 2
Query:  107 PSGAW--PLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYSQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIK 481
            P G W  PLIG+L  L   +P    L  LA K+GP+  LRLG+   +++S     ++     D   A+R  ++    + Y +   + APY   WR +RK+  +ELL++H++  L  VR SE  + ++
Sbjct:   28 PPGPWRLPLIGNLLHLATSQPHVA-LRDLAMKHGPVMYLRLGQVDAVVISSPAAAQEVLRDKDTTFASRPSLLVADIILYGSMDMSFAPYGGNWRMLRKLCMSELLNTHKVRQLAAVRDSETLSLVR 153          
BLAST of DN617619 vs. ExPASy Swiss-Prot
Match: C71BU_ARATH (Cytochrome P450 71B31 OS=Arabidopsis thaliana GN=CYP71B31 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.036e-11
Identity = 52/196 (26.53%), Postives = 88/196 (44.90%), Query Frame = 2
Query:   26 LSLLIVYCFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYSQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDY 613
            L LL ++  + I+ K++    K   P P+G  PLIG+L  L     +   L  L+ ++GP+  +R G  P+ + S  E  K+   T+D     R K+VA     +         Y + WR+++K    EL S  + +  +++R  E D  +K +    S  A     V + K +   T +I  +   G+ F   DY
Sbjct:    5 LGLLFLFPLFFILFKNLLPPRKKLPPGPTGL-PLIGNLHQLG--RLLHSSLHKLSLEHGPVMLVRWGVVPMAVFSSNEAAKEVLKTHDLETCNRPKLVANGLFTHGYKDIGFTQYGEEWREMKKFVGLELFSPKKHKSFRYIREEEGDLLVKKI----SNYAQTQTLVDLRKSLFSYTASIIFREAFGQNFRECDY 193          
The following BLAST results are available for this feature:
BLAST of DN617619 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
C99A1_SORBI6.036e-1132.28Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bico... [more]
C71BU_ARATH6.036e-1126.53Cytochrome P450 71B31 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01H09_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617619 ID=DN617619; Name=DN617619; organism=Citrus sinensis; type=EST; length=677bp
TTTCACCCCAGCAATTTTTGAGCTCTTATCTCTGCTAATTGTCTATTGTT
TTTGGAGAATCATAGCAAAATCTATAAACAAAAGAGAGAAAAATACTGCC
CCCGAGCCATCTGGGGCATGGCCACTCATCGGCCATTTGCCTCTGCTAAA
TGGCCAAGAACCAATTTGCAAAATACTTGGAGCATTGGCCGATAAATATG
GGCCCATCTATTCTCTTAGACTTGGCAAGCATCCCATATTGATTGTGAGC
GGTTGGGAAATTGTGAAGGATTGCTTCACTACCAATGACAGAATTCTGGC
TACAAGGGCAAAAATTGTAGCAGGCAAGTATATGGGTTATGACAACGCCA
TTTTTGCACTTGCTCCCTACAGTCAGTACTGGCGTGATATTCGCAAAATA
GCCACCACAGAGCTTCTCTCAAGTCACCGGCTTGAATTGCTGAAGCACGT
TCGCTACTCTGAAGTTGACACTTTCATCAAAGATTTGTACTCACTTTGCT
CAGAAAACGCATTCAATCCTGCGAAGGTGGTGATCAGCAAGTTAATCGAG
CAGTTAACTTTCAATATAAGCCTGAAACTGATAGCTGGGAAGCGATTTTC
AGCTAAAGATTATGAGGAACAAGGCAGCGAGGCTTGGCGTATCAACAGAG
CAATAAAAGAAGCAACGCACCTATTCG
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