DN617612

Overview
NameDN617612
Unique NameDN617612
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length604
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617612 vs. ExPASy Swiss-Prot
Match: ACOX2_HUMAN (Peroxisomal acyl-coenzyme A oxidase 2 OS=Homo sapiens GN=ACOX2 PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.284e-19
Identity = 64/211 (30.33%), Postives = 99/211 (46.92%), Query Frame = 2
Query:    2 DNIVLLLQVARFLMKTVSQLGYGNMPVGTTTYMGRAEQLMQ------CHCGVQKAEDWLNPSAILEAFEARAIRMSVACAQNLSKFT----NQEEGFXXXXXXXXXXXXXHCQLIVVSKFIEKLQQDIPGKGVKPILEILCHIYALHLVHKHLGDFVSTGCITAKQASLANEQLRSLYSQVRPNAIALVDAYNYTDHYLGSVLGRYDGNVY 604
            +N VL LQVARFL+K+  Q     M  G+T     +  +          C  Q+A D+L P     A+   A+R+     Q+L   T    +Q E +             HC  + V  F E L++      ++ +L+ LC ++A+H +  + GDF+    ++  Q  +A      L   +R +AI L DA+++TD  L S LG YDGNVY
Sbjct:  439 ENTVLYLQVARFLVKSYLQT---QMSPGSTPQRSLSPSVAYLTAPDLARCPAQRAADFLCPELYTTAWAHVAVRLIKDSVQHLQTLTQSGADQHEAWNQTTVIHLQAAKVHCYYVTVKGFTEALEKLENEPAIQQVLKRLCDLHAIHGILTNSGDFLHDAFLSGAQVDMARTAYLDLLRLIRKDAILLTDAFDFTDQCLNSALGCYDGNVY 646          
BLAST of DN617612 vs. ExPASy Swiss-Prot
Match: ACOX2_MOUSE (Peroxisomal acyl-coenzyme A oxidase 2 OS=Mus musculus GN=Acox2 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 9.203e-18
Identity = 64/211 (30.33%), Postives = 102/211 (48.34%), Query Frame = 2
Query:    2 DNIVLLLQVARFLMKTV--SQLGYGNMPVG----TTTYMGRAEQLMQCHCGVQKAEDWLNPSAILEAF---EARAIRMSVACAQNLSKF-TNQEEGFXXXXXXXXXXXXXHCQLIVVSKFIEKLQQDIPGKGVKPILEILCHIYALHLVHKHLGDFVSTGCITAKQASLANEQLRSLYSQVRPNAIALVDAYNYTDHYLGSVLGRYDGNVY 604
            +N VL LQVARFLMK+   +Q+  G++P      +  Y+          C  Q A D+  P     A+    AR IR +    Q L +   +Q + +             HC  + V  F E +++      ++ +L+ LC +YAL+ +  + GDF+  G ++  Q  +A      L   +R +AI L DA++++DH L S LG YDG+VY
Sbjct:  439 ENTVLYLQVARFLMKSYLQAQVSPGSIPQKPLPQSVMYLATPRP---ARCPAQTAADFRCPEVYTTAWAYVSARLIRDATQHTQTLMRSGVDQYDAWNQTSVIHLQAAKAHCYFLTVRNFKEAVEKLDNEPEIQRVLQNLCDLYALNGILTNSGDFLHDGFLSGAQVDMARTAFLDLLPLIRKDAILLTDAFDFSDHCLNSALGCYDGHVY 646          
BLAST of DN617612 vs. ExPASy Swiss-Prot
Match: ACOX2_RABIT (Peroxisomal acyl-coenzyme A oxidase 2 OS=Oryctolagus cuniculus GN=ACOX2 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.050e-17
Identity = 63/211 (29.86%), Postives = 97/211 (45.97%), Query Frame = 2
Query:    2 DNIVLLLQVARFLMKTVSQLGYGNMPVGTTTYMGRAEQLMQ------CHCGVQKAEDWLNPSAILEAFEARAIRMSVACAQNLSKF----TNQEEGFXXXXXXXXXXXXXHCQLIVVSKFIEKLQQDIPGKGVKPILEILCHIYALHLVHKHLGDFVSTGCITAKQASLANEQLRSLYSQVRPNAIALVDAYNYTDHYLGSVLGRYDGNVY 604
            +N VL LQVARFL+K+  Q      P G+T+       +          C  Q A D+  P+    A+   A R++     +L        ++ E +             HC  I V  F E L++      ++ +L+ LC ++ALH +  + GDF+  G ++  Q  +A      L   +R +AI L DA+++TD  L S LG YDGNVY
Sbjct:  439 ENTVLYLQVARFLVKSCLQAQ--GFP-GSTSQRSLPRSVSYLALPDLARCPAQTAADFFCPALYTAAWAHVAARLTKDSVHHLQALRQSGADEHEAWNQTTIIHLQAAKAHCYYISVKSFKEALEKLENEPAIQQVLKRLCDLHALHGILTNSGDFLHDGFLSGAQVDMARTAYMDLLPLIRKDAILLTDAFDFTDQCLNSALGCYDGNVY 646          
BLAST of DN617612 vs. ExPASy Swiss-Prot
Match: ACOX_DEBHA (Acyl-coenzyme A oxidase OS=Debaryomyces hansenii GN=POX1 PE=3 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.375e-13
Identity = 50/203 (24.63%), Postives = 96/203 (47.29%), Query Frame = 2
Query:    2 DNIVLLLQVARFLMKTVSQLGYGNMPVGTTTYMGRAEQLMQCHCGVQKAEDWLNPSAILEAFEARAIRMSVACAQNLSKFTNQEEGFXXXXXXXXXXXXXHCQLIVVSKFIEKLQQDIPGKGVKPILEILCHIYALHLV-HKHLGDFVSTGCITAK-QASLANEQLRSLYSQVRPNAIALVDAYNYTDHYLGSVLGRYDGNVY 604
            DN VL + V + ++K +  +  G    G+  ++   EQ +     ++  +D  +   +L A E   IR++   +Q L +    +  F             +    ++S+F++++      K + P LE +  +Y+  +V  K  GDF++ G    K    L ++ +  L  ++RPN IAL D++  +D  + S +G YDGN+Y
Sbjct:  457 DNNVLAMSVGKQIIKHILGVLDGKKVKGSADFLNNTEQYLNEEPVLRSVDDLKDLKKVLLAIEVAIIRVAYQASQTLKE---NKGDFDTVGAEMVTLSKLNAHHFMLSEFLDRMDS-FESKQLVPYLESVAKLYSATIVLEKFAGDFLAQGVFPPKLNGELNSKHIPELCKEIRPNVIALTDSFQQSDMMINSAIGSYDGNIY 655          
BLAST of DN617612 vs. ExPASy Swiss-Prot
Match: ACOX1_YARLI (Acyl-coenzyme A oxidase 1 OS=Yarrowia lipolytica GN=POX1 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.986e-12
Identity = 54/204 (26.47%), Postives = 91/204 (44.61%), Query Frame = 2
Query:    2 DNIVLLLQVARFLMKTVSQLGYGNMPVGTTTYMGRAEQLMQCHCGVQKAEDWLNPSAILEAFEARA---IRMSVACAQNLSKFTNQEEGFXXXXXXXXXXXXXHCQLIVVSKFIEKLQQDIPGKGVKPILEILCHIYALHLVHKHLGDFVSTGCITAKQASLANEQLRSLYSQVRPNAIALVDAYNYTDHYLGSVLGRYDGNVY 604
            DN VL L + R L+++  Q+  G     +  Y+G   ++ Q   G  + E  L+P  ++EAF   +   I  +    Q L K  N ++ F             H +  ++S F  ++        +KP L  L +++AL  + +  G F+    +T     L N  +  L   VR   I L DA+  +D ++ + +G YDGNVY
Sbjct:  446 DNNVLCLSMGRGLVQSALQILAGKHVGASIQYVGDKSKISQNGQGTPR-EQLLSPEFLVEAFRTASRNNILRTTDKYQELVKTLNPDQAFEELSQQRFQCARIHTRQHLISSFYARIAT--AKDDIKPHLLKLANLFALWSIEEDTGIFLRENILTPGDIDLINSLVDELCVAVRDQVIGLTDAFGLSDFFINAPIGSYDGNVY 646          
The following BLAST results are available for this feature:
BLAST of DN617612 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
ACOX2_HUMAN1.284e-1930.33Peroxisomal acyl-coenzyme A oxidase 2 OS=Homo sapi... [more]
ACOX2_MOUSE9.203e-1830.33Peroxisomal acyl-coenzyme A oxidase 2 OS=Mus muscu... [more]
ACOX2_RABIT2.050e-1729.86Peroxisomal acyl-coenzyme A oxidase 2 OS=Oryctolag... [more]
ACOX_DEBHA1.375e-1324.63Acyl-coenzyme A oxidase OS=Debaryomyces hansenii G... [more]
ACOX1_YARLI1.986e-1226.47Acyl-coenzyme A oxidase 1 OS=Yarrowia lipolytica G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01H04_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617612 ID=DN617612; Name=DN617612; organism=Citrus sinensis; type=EST; length=604bp
AGACAATATTGTGCTGCTCTTACAGGTTGCAAGGTTTCTCATGAAGACCG
TATCTCAGCTGGGATACGGAAATATGCCTGTTGGGACAACAACTTATATG
GGACGGGCAGAACAATTGATGCAATGTCATTGTGGCGTCCAAAAAGCTGA
GGATTGGTTAAATCCTTCTGCCATACTGGAGGCCTTTGAAGCAAGGGCTA
TTAGGATGTCTGTGGCCTGTGCTCAAAACCTGAGCAAGTTTACAAATCAA
GAAGAGGGTTTTGCGGAACTGGCAGCTGATTTAGTTGAGGCAGCTGTTGC
TCATTGCCAGCTAATTGTTGTTTCCAAGTTTATTGAGAAATTGCAGCAGG
ACATACCAGGAAAGGGGGTGAAACCAATTTTGGAGATCTTATGCCACATC
TATGCTTTGCATCTTGTTCACAAACATCTAGGTGATTTCGTCTCCACTGG
CTGCATTACTGCCAAGCAAGCTTCCCTAGCTAATGAACAGCTAAGATCTT
TATATTCCCAGGTCCGACCTAATGCTATTGCACTCGTCGATGCATATAAT
TACACCGATCACTATCTTGGCTCGGTCCTTGGACGGTATGATGGAAATGT
GTAC
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