DN617609

Overview
NameDN617609
Unique NameDN617609
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length626
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617609 vs. ExPASy Swiss-Prot
Match: ZIP9_ARATH (Zinc transporter 9 OS=Arabidopsis thaliana GN=ZIP9 PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.073e-40
Identity = 82/156 (52.56%), Postives = 114/156 (73.08%), Query Frame = -3
Query:   61 LRHRVISLVLELGILVHSVIIGISLGASESPKTIKPLVAALTFHQFFEGMGLGGCITQAKFKSRGVAILALFFSLTTPVXXXXXXXISSVYDENSPTALIVEGIFNAAAAGILIYMSLVDLLAADFMNPKMQTNKRLQFGANVSLLLGAGCMSLLA 528
            +RH V+S +LE+GI+ HS+IIGISLG S SP TI+PL+ AL+FHQFFEG  LGGC+ +A+   RG A++A FF++TTP+       I+S Y+  S  AL+ EG+ ++ +AGIL+YM+LVDL+AADF++ KM  + R+Q  +   L LGAG MS LA
Sbjct:  186 VRHVVVSQILEMGIVSHSIIIGISLGVSHSPCTIRPLLLALSFHQFFEGFALGGCVAEARLTPRGSAMMAFFFAITTPIGVAVGTAIASSYNSYSVAALVAEGVLDSLSAGILVYMALVDLIAADFLSKKMSVDFRVQVVSYCFLFLGAGMMSALA 341          
BLAST of DN617609 vs. ExPASy Swiss-Prot
Match: IRT2_ARATH (Fe(2+) transport protein 2 OS=Arabidopsis thaliana GN=IRT2 PE=1 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 2.923e-38
Identity = 82/160 (51.25%), Postives = 112/160 (70.00%), Query Frame = -3
Query:   61 ESELLRHRVISLVLELGILVHSVIIGISLGASESPKTIKPLVAALTFHQFFEGMGLGGCITQAKFKSRGVAILALFFSLTTPVXXXXXXXISSVYDENSPTALIVEGIFNAAAAGILIYMSLVDLLAADFMNPKMQTNKRLQFGANVSLLLGAGCMSLLA 540
            + +LLR++VI++VLE+GIL HSV+IG+SLGA+    TIK L+ AL FH  FEG+GLGGCI QA F +    ++A FF+ TTP        +SS+Y +NSPTALI  G+ NA +AG+LIYM+LVDLLA +FM   +Q + +LQ     + LLG   MS++A
Sbjct:  188 DGQLLRYQVIAMVLEVGILFHSVVIGLSLGATNDSCTIKGLIIALCFHHLFEGIGLGGCILQADFTNVKKFLMAFFFTGTTPCGIFLGIALSSIYRDNSPTALITIGLLNACSAGMLIYMALVDLLATEFMGSMLQGSIKLQIKCFTAALLGCAVMSVVA 347          
BLAST of DN617609 vs. ExPASy Swiss-Prot
Match: ZIP6_ARATH (Zinc transporter 6, chloroplastic OS=Arabidopsis thaliana GN=ZIP6 PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 3.573e-36
Identity = 80/174 (45.98%), Postives = 122/174 (70.11%), Query Frame = -3
Query:   61 LEYSGESEL--LRHRVISLVLELGILVHSVIIGISLGASESPKTIKPLVAALTFHQFFEGMGLGGCITQAKFKSRGVAILALFFSLTTP--VXXXXXXXISSVYDENSPTALIVEGIFNAAAAGILIYMSLVDLLAADFMNPKM-----QTNKRLQFGANVSLLLGAGCMSLLA 555
            ++ + E E+  ++ R++S VLE+GI+ HSVIIG+++G S++  TI+PL+AAL+FHQ FEG+GLGGCI QA FK+  V  + L F++TTP  +        ++ YD+ +P ALI+EG+  + ++GILIYM+LVDL+A DF + KM     ++  RL+    V+L+LG+  MSLLA
Sbjct:  165 IQENSEEEIVKMKQRLVSQVLEIGIIFHSVIIGVTMGMSQNKCTIRPLIAALSFHQIFEGLGLGGCIAQAGFKAGTVVYMCLMFAVTTPLGIVLGMVIFAATGYDDQNPNALIMEGLLGSFSSGILIYMALVDLIALDFFHNKMLTTCGESGSRLKKLCFVALVLGSASMSLLA 338          
BLAST of DN617609 vs. ExPASy Swiss-Prot
Match: ZRT1_YEAST (Zinc-regulated transporter 1 OS=Saccharomyces cerevisiae GN=ZRT1 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.508e-18
Identity = 56/154 (36.36%), Postives = 86/154 (55.84%), Query Frame = -3
Query:   58 LVLELGILVHSVIIGISLGASESPKTIKPLVAALTFHQFFEGMGLGGCITQAKF---KSRGVAILALFFSLTTPVXXXXXXXISSVYDENSPTALIVEGIFNAAAAGILIYMSLVDLLAADFMNPKMQTNKRLQFGANV-SLLLGAGCMSLLAR 507
            L+LE G++ HSV+IG++LG+         L   L FHQ FEG+G+G  ++  +F   K      L + + LTTP+       + + Y   S TAL++ G+ +A +AGIL+Y  LV+LLA DF+    +T    +   NV   L GAG M+L+ +
Sbjct:  223 LILEFGVIFHSVMIGLNLGSVGDE--FSSLYPVLVFHQSFEGLGIGARLSAIEFPRSKRWWPWALCVAYGLTTPICVAIGLGVRTRYVSGSYTALVISGVLDAISAGILLYTGLVELLARDFIFNPQRTKDLRELSFNVICTLFGAGIMALIGK 374          
BLAST of DN617609 vs. ExPASy Swiss-Prot
Match: ZRT2_YEAST (Zinc-regulated transporter 2 OS=Saccharomyces cerevisiae GN=ZRT2 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 5.364e-16
Identity = 54/172 (31.40%), Postives = 90/172 (52.33%), Query Frame = -3
Query:   58 LEYSGESELLRHRVISLVLELGILVHSVIIGISLGASESPKTIKPLVAALTFHQFFEGMGLGGCITQAKF---KSRGVAILALFFSLTTPVXXXXXXXISSVYDENSPTALIVEGIFNAAAAGILIYMSLVDLLAADFMNP---KMQTNKRLQFGANVSLLLGAGCMSLLAR 555
            +E   + + L   +   +LE GI+ HSV +G+SL  S + +  + L   LTFHQ FEG+GLG  + +  +   K     ++ L F+LT+P+       +   +   S  ALI  G+F++ ++GILIY  LV+L+A +F+     K     +    A + +  GA  M+LL +
Sbjct:  251 IEEEDKEQYLNQILAVFILEFGIIFHSVFVGLSL--SVAGEEFETLFIVLTFHQMFEGLGLGTRVAETNWPESKKYMPWLMGLAFTLTSPIAVAVGIGVRHSWIPGSRRALIANGVFDSISSGILIYTGLVELMAHEFLYSNQFKGPDGLKKMLSAYLIMCCGAALMALLGK 420          
BLAST of DN617609 vs. ExPASy Swiss-Prot
Match: ZRT1_SCHPO (Zinc-regulated transporter 1 OS=Schizosaccharomyces pombe GN=zrt1 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.492e-13
Identity = 54/166 (32.53%), Postives = 92/166 (55.42%), Query Frame = -3
Query:   58 SELLRHRVIS-LVLELGILVHSVIIGISLGAS-ESPKTIKPLVAALTFHQFFEGMGLGGCITQAKF--KSRGVA-ILALFFSLTTPVXXXXXXXISSVYDENSPTALIVEGIFNAAAAGILIYMSLVDLLAADFM-NPKMQTNKRLQFGANVSLLLGAGCMSLLAR 537
            S LL+ ++ + ++LE  I++HSVIIG++   S E  KT+ P++    FHQ FEG GLG  +    +  K+  V  +L + +SL TP+       +   +D  +  +   +G+ +A ++GIL+Y  LV+LLA DF+ +P+ + N           + G G M+LL +
Sbjct:  244 SFLLKQQLTAFIILESSIILHSVIIGLTTAVSGEEFKTLFPVII---FHQAFEGCGLGSRLAGMAWGPKTAWVPWVLGVIYSLVTPIGMAAGLGVREHWDPLAHGSYAAQGVLDAISSGILVYAGLVELLAHDFLFSPERERNWYKLIYLLACSMAGTGVMALLGK 406          
The following BLAST results are available for this feature:
BLAST of DN617609 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
ZIP9_ARATH1.073e-4052.56Zinc transporter 9 OS=Arabidopsis thaliana GN=ZIP9... [more]
IRT2_ARATH2.923e-3851.25Fe(2+) transport protein 2 OS=Arabidopsis thaliana... [more]
ZIP6_ARATH3.573e-3645.98Zinc transporter 6, chloroplastic OS=Arabidopsis t... [more]
ZRT1_YEAST1.508e-1836.36Zinc-regulated transporter 1 OS=Saccharomyces cere... [more]
ZRT2_YEAST5.364e-1631.40Zinc-regulated transporter 2 OS=Saccharomyces cere... [more]
ZRT1_SCHPO2.492e-1332.53Zinc-regulated transporter 1 OS=Schizosaccharomyce... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01H03_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617609 ID=DN617609; Name=DN617609; organism=Citrus sinensis; type=EST; length=626bp
AAACTATTTGGATGAATAAAAATTGTAGACAAAATCTCGAATGAATTTTA
AGCCCATTCTGGCTAACAAAGACATGCAACCAGCGCCTAAAAGAAGAGAA
ACATTTGCTCCAAACTGAAGCCTTTTATTGGTTTGCATCTTTGGATTCAT
AAAATCTGCAGCAAGAAGATCCACCAAGGACATGTATATTAGGATTCCGG
CTGCTGCTGCATTGAATATTCCTTCAACAATAAGAGCGGTGGGGCTATTT
TCGTCATAAACACTTGATATTCCAATGCCTATTGCTATCCCAACTGGGGT
CGTCAAAGAGAAGAACAAGGCCAATATTGCAACTCCTCGAGACTTGAATT
TTGCCTGCGTAATGCAACCACCAAGACCCATTCCTTCAAAGAATTGATGA
AAAGTCAACGCTGCAACCAAAGGCTTAATGGTTTTTGGACTCTCAGAAGC
TCCCAAGGAAATTCCAATTATTACCGAGTGCACAAGAATTCCCAACTCCA
AAACCAGAGATATGACACGGTGTCGTAGAAGCTCCGATTCACCGGAATAT
TCAAGAAATCCATGAGCATGCCCATCAGTTGCATGGGTATGAACATGCAC
GTGACCTGCATGCTCCCCAACTTTCT
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