DN617602

Overview
NameDN617602
Unique NameDN617602
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length497
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11119 contig Csv1_Contig11119:53..549. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617602 vs. ExPASy Swiss-Prot
Match: E133_ARATH (Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana GN=At2g01630 PE=1 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 2.929e-17
Identity = 53/142 (37.32%), Postives = 83/142 (58.45%), Query Frame = 3
Query:   78 IGVNYGAIANNLPPPQQVANFLKTQTTIDRVKLFDANPEFLRAFAHTNIPVTVTVGNGDIPALAKLPA-AQSWVANNILPHHPQNIFRYIVLGNEILARSDKVLIASLLPAMRTLKSALDAANLS-SVQVSTPHSLGILSTS 497
            IGVN G    N+P P QV   LK+Q  I+RV+L+DA+   L AFAHT + V ++V N  +  +++  A A +WV  N+  ++P      I +G+E+L        + L+ A++ +++AL  ANL   ++VSTPHS  I+  S
Sbjct:   23 IGVNIGTEVTNMPSPTQVVALLKSQN-INRVRLYDADRSMLLAFAHTGVQVIISVPNDQLLGISQSNATAANWVTRNVAAYYPATNITTIAVGSEVLTSLTNA-ASVLVSALKYIQAALVTANLDRQIKVSTPHSSTIILDS 162          
BLAST of DN617602 vs. ExPASy Swiss-Prot
Match: E13B_HORVU (Glucan endo-1,3-beta-glucosidase GII OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 3.825e-17
Identity = 50/140 (35.71%), Postives = 82/140 (58.57%), Query Frame = 3
Query:   51 AITPSAADSIGVNYGAIANNLPPPQQVANFLKTQTTIDRVKLFDANPEFLRAFAHTNIPVTVTVGNGDIPALAKLPA-AQSWVANNILPHHPQNIFRYIVLGNEILARSDKVLIASLLPAMRTLKSALDAANLSSVQVST 467
            A  P++  SIGV YG I NNLP    V    +++  I+ ++++ A+ + L A  ++ I + + +GN  +  +A   + A SWV NN+ P++P    +YI  GNE+   + +    S+LPAMR L +AL AA L +++VST
Sbjct:   20 AAVPTSVQSIGVCYGVIGNNLPSRSDVVQLYRSKG-INGMRIYFADGQALSALRNSGIGLILDIGNDQLANIAASTSNAASWVQNNVRPYYPAVNIKYIAAGNEVQGGATQ----SILPAMRNLNAALSAAGLGAIKVST 154          
BLAST of DN617602 vs. ExPASy Swiss-Prot
Match: E13D_HORVU (Glucan endo-1,3-beta-glucosidase GIV OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 4.995e-17
Identity = 53/142 (37.32%), Postives = 80/142 (56.34%), Query Frame = 3
Query:   78 IGVNYGAIANNLPPPQQVANFLKTQTTIDRVKLFDANPEFLRAFAHTNIPVTVTVGNGDIPALA-KLPAAQSWVANNILPHHPQNI-FRYIVLGNEILARSDKVLIASLLPAMRTLKSALDAANLSSVQVSTPHSLGILSTS 497
            IGV YG IANNLPP ++V    +++  I  ++++   P+ +RA   + I + +   N D+  LA  L AA SWV  N+ P+H   +  RYI +GNEI   + +    S+L AMR L  AL AA L  ++VST     +++ S
Sbjct:    1 IGVCYGIIANNLPPRREVVQLYRSK-GITNMRIYSVQPQAIRALHGSGIRLMLGTTNNDVAVLAGSLSAATSWVHANVKPYHSAGVTIRYIAVGNEITGGAAQ----SILAAMRNLNKALAAARLGGIKVSTAVRFDVITNS 137          
BLAST of DN617602 vs. ExPASy Swiss-Prot
Match: E134_ARATH (Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana GN=At3g13560 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 6.524e-17
Identity = 56/144 (38.89%), Postives = 81/144 (56.25%), Query Frame = 3
Query:   63 SAADSIGVNYGAIANNLPPPQQVANFLKTQTTIDRVKLFDANPEFLRAFAHTNIPVTVTVGNGDIPALAKLP-AAQSWVANNILPHHPQNIFRYIVLGNEILARSDKVLIASLLPAMRTLKSALDAANLS-SVQVSTPHSLGIL 488
            S A  IGVN G    N+PPP  +   LK+Q  I  V+L+DAN   L+AFA+T+I V V V N +I  + + P AA +WV  N+  + P      I +G+E+L     V    L  A+  +  AL A+NL+  V+VS+P S+ I+
Sbjct:   21 SNAAFIGVNIGTDLTNMPPPSDIVTLLKSQQ-ITHVRLYDANSHMLKAFANTSIEVMVGVTNEEILKIGRFPSAAAAWVNKNVAAYIPSTNITAIAVGSEVLTTIPHV-APILASALNNIHKALVASNLNFKVKVSSPMSMDIM 162          
BLAST of DN617602 vs. ExPASy Swiss-Prot
Match: E13L_TOBAC (Glucan endo-1,3-beta-glucosidase, acidic isoform GL153 OS=Nicotiana tabacum GN=GGL4 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 5.523e-16
Identity = 52/144 (36.11%), Postives = 78/144 (54.17%), Query Frame = 3
Query:   69 ADSIGVNYGAIANNLPPPQQVANFLKTQTTIDRVKLFDANPEFLRAFAHTNIPVTVTVGNGDIPALAKLPAAQSWVANNILPHHPQNIFRYIVLGNEILARSDKVLIASLLPAMRTLKSALDAANL-SSVQVSTPHSLGILSTS 497
            A SIGV YG IANNLP  Q V N  K    I +++++  +    +A   +NI + + V N D+ ALA    A  WV +NI  H P   F+YI +GNE+   ++      LL AM  + +AL A+ L   ++V+T    G+L+ +
Sbjct:   29 AQSIGVCYGKIANNLPSEQDVINLYKANG-IRKMRIYYPDKNIFKALKGSNIEIILDVPNQDLEALANSSIANGWVQDNIRSHFPYVKFKYISIGNEVSPINNGQYSQFLLHAMENVYNALAASGLQDKIKVTTATYSGLLANT 171          
BLAST of DN617602 vs. ExPASy Swiss-Prot
Match: E13B_BRACM (Glucan endo-1,3-beta-glucosidase OS=Brassica campestris GN=BGL PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 5.523e-16
Identity = 51/141 (36.17%), Postives = 83/141 (58.87%), Query Frame = 3
Query:   63 SAADSIGVNYGAIANNLPPPQQVANFLKTQTTIDRVKLFDANPEFLRAFAHTNIPVTVTVGNGDIPALAKLPA-AQSWVANNILPHHPQNIFRYIVLGNEILARSDKVLIASLLPAMRTLKSALDAANLSSVQVSTPHSLG 482
            + A  IGV +G + NN+P P +V    K Q +I R++++  NP+ L A   +NI   + V NGD+  LA   A A +WV +N+  ++    F+YI +GNE+  +  +   A+L+ AM+ +  AL AA LS+++VST   +G
Sbjct:   22 TTAGQIGVCFGQMGNNIPNPSEVVAMFK-QYSIPRMRMYGPNPDALNALRGSNIEFILDVPNGDLKRLADSQAEANTWVRDNVQKYNDVR-FKYISVGNEV--KPGEPGAAALIQAMQNIDRALSAAGLSNIKVSTTTFMG 158          
BLAST of DN617602 vs. ExPASy Swiss-Prot
Match: E13A_SOLLC (Glucan endo-1,3-beta-glucosidase A OS=Solanum lycopersicum PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 7.213e-16
Identity = 53/147 (36.05%), Postives = 77/147 (52.38%), Query Frame = 3
Query:   63 SAADSIGVNYGAIANNLPPPQQVANFLKTQTTIDRVKLFDANPEFLRAFAHTNIPVTVTVGNGDIPALAKLPAAQSWVANNILPHHPQNIFRYIVLGNEILARSDKVLIASLL-PAMRTLKSALDAANL-SSVQVSTPHSLGILSTS 497
            + A  IGV YG IANNLP  Q V   L     I +++++        A   +NI + + V N D+ ALA     Q WV +NI  H P   F+YI +GNE+    D    A  + PAM  + +AL +A L + ++VST   LG+L+ +
Sbjct:   21 TGAQPIGVCYGKIANNLPSDQDVIK-LYNSNNIKKMRIYFPETNVFNALKGSNIEIILDVPNQDLEALANPSKRQGWVQDNIRNHFPDVKFKYIAVGNEVDPGRDSGKYARFVGPAMENIYNALSSAGLQNQIKVSTATYLGLLTNT 166          
BLAST of DN617602 vs. ExPASy Swiss-Prot
Match: E13K_TOBAC (Glucan endo-1,3-beta-glucosidase, acidic isoform GL161 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 9.421e-16
Identity = 52/144 (36.11%), Postives = 78/144 (54.17%), Query Frame = 3
Query:   69 ADSIGVNYGAIANNLPPPQQVANFLKTQTTIDRVKLFDANPEFLRAFAHTNIPVTVTVGNGDIPALAKLPAAQSWVANNILPHHPQNIFRYIVLGNEILARSDKVLIASLLPAMRTLKSALDAANLSS-VQVSTPHSLGILSTS 497
            A SIGV YG  ANNLP  Q V N L     I +++++  +    +A   +NI + + V N D+ ALA    A  WV +NI  H P   F+YI +GN++   ++      LL AM+ + +AL AA L   ++VST    G+L+ +
Sbjct:    9 AQSIGVCYGKAANNLPSDQDVIN-LYNANGIRKLRIYYPDKNIFKALNGSNIEIILGVPNQDLEALANSSIANGWVQDNIRSHFPYVKFKYISIGNKVSPTNNDQYSEFLLQAMKNVYNALAAAGLQDMIKVSTVTYSGVLANT 151          
BLAST of DN617602 vs. ExPASy Swiss-Prot
Match: E1313_ARATH (Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis thaliana GN=At5g56590 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.607e-15
Identity = 52/144 (36.11%), Postives = 87/144 (60.42%), Query Frame = 3
Query:   78 IGVNYGAIANNLPPPQQVANFLKTQTTIDRVKLFDANPEFLRAFAHTNIPVTVTVGNGDIPALAKLPA-AQSWVANNILPHHPQNIFRYIVLGNEILARSDKVLIAS--LLPAMRTLKSALDAANLS-SVQVSTPHSLGILSTS 497
            +GV YG  A++LP P +V   ++ Q  I  V+++D N + L+AF +T+I + + V N D+ A ++  +   +W+ N++LP++P     YI +G E  +  D  + AS  ++PAM+ + +AL    LS  ++VST  SLGILS S
Sbjct:   26 VGVCYGRSADDLPTPSKVVQLIQ-QHNIKYVRIYDYNSQVLKAFGNTSIELMIGVPNSDLNAFSQSQSNVDTWLKNSVLPYYPTTKITYITVGAE--STDDPHINASSFVVPAMQNVLTALRKVGLSRRIKVSTTLSLGILSRS 166          
BLAST of DN617602 vs. ExPASy Swiss-Prot
Match: E13B_HEVBR (Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform OS=Hevea brasiliensis GN=HGN1 PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 3.580e-15
Identity = 51/143 (35.66%), Postives = 77/143 (53.85%), Query Frame = 3
Query:   78 IGVNYGAIANNLPPPQQVANFLKTQTTIDRVKLFDANPEFLRAFAHTNIPVTVTVGNGDIPALAKLPAAQSWVANNILPHHPQNIFRYIVLGNEI--LARSDKVLIASLLPAMRTLKSALDAANL-SSVQVSTPHSLGILSTS 497
            +GV YG   NNLPP  +V    K ++ I R++++D N   L A   +NI + + V N D+ +L     A+SWV  N+       +FRYI +GNEI  + R    L   +LPAMR +  A+ +A L   ++VST   L ++  S
Sbjct:   38 VGVCYGMQGNNLPPVSEVIALYK-KSNITRMRIYDPNRAVLEALRGSNIELILGVPNSDLQSLTNPSNAKSWVQKNVRGFWSSVLFRYIAVGNEISPVNRGTAWLAQFVLPAMRNIHDAIRSAGLQDQIKVSTAIDLTLVGNS 179          
The following BLAST results are available for this feature:
BLAST of DN617602 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
E133_ARATH2.929e-1737.32Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis ... [more]
E13B_HORVU3.825e-1735.71Glucan endo-1,3-beta-glucosidase GII OS=Hordeum vu... [more]
E13D_HORVU4.995e-1737.32Glucan endo-1,3-beta-glucosidase GIV OS=Hordeum vu... [more]
E134_ARATH6.524e-1738.89Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis ... [more]
E13L_TOBAC5.523e-1636.11Glucan endo-1,3-beta-glucosidase, acidic isoform G... [more]
E13B_BRACM5.523e-1636.17Glucan endo-1,3-beta-glucosidase OS=Brassica campe... [more]
E13A_SOLLC7.213e-1636.05Glucan endo-1,3-beta-glucosidase A OS=Solanum lyco... [more]
E13K_TOBAC9.421e-1636.11Glucan endo-1,3-beta-glucosidase, acidic isoform G... [more]
E1313_ARATH1.607e-1536.11Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis... [more]
E13B_HEVBR3.580e-1535.66Glucan endo-1,3-beta-glucosidase, basic vacuolar i... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01G23_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001G23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617602 ID=DN617602; Name=DN617602; organism=Citrus sinensis; type=EST; length=497bp
CTAAACTCTCTCAATTCCTCCTCTTCCTCTTCCTCTCCCTGTCTTGCAAC
GCCATCACCCCCTCCGCCGCTGACTCCATCGGCGTCAACTACGGCGCCAT
CGCCAACAACCTCCCGCCACCTCAGCAAGTAGCCAATTTCCTCAAAACCC
AAACCACCATAGACCGCGTCAAGCTCTTCGACGCCAACCCCGAATTCCTC
CGCGCCTTCGCCCACACAAACATCCCCGTCACCGTCACGGTCGGCAACGG
CGACATACCTGCCCTCGCAAAACTCCCCGCCGCCCAGTCCTGGGTCGCTA
ACAACATCCTGCCGCATCACCCCCAGAACATCTTCAGATACATCGTCCTC
GGCAACGAAATCTTGGCCAGGTCGGATAAAGTCCTCATCGCTTCTCTCCT
GCCCGCCATGAGAACTCTTAAATCAGCTCTCGATGCGGCCAATCTGAGCA
GCGTCCAGGTGTCGACACCTCATTCCCTGGGGATTTTATCAACCTCT
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