DN617602

Overview
NameDN617602
Unique NameDN617602
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length497
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11119 contig Csv1_Contig11119:53..549. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617602 vs. ExPASy Swiss-Prot
Match: E13G_TOBAC (Glucan endo-1,3-beta-glucosidase, acidic isoform GI9 OS=Nicotiana tabacum GN=PR2 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 7.975e-15
Identity = 50/144 (34.72%), Postives = 77/144 (53.47%), Query Frame = 3
Query:   69 ADSIGVNYGAIANNLPPPQQVANFLKTQTTIDRVKLFDANPEFLRAFAHTNIPVTVTVGNGDIPALAKLPAAQSWVANNILPHHPQNIFRYIVLGNEILARSDKVLIASLLPAMRTLKSALDAANL-SSVQVSTPHSLGILSTS 497
            A SIGV YG  ANNLP  Q V N L     I ++++++ +     A   +NI + + V   D+ +L     A  WV +NI+ H P   F+YI +GNE+   ++      + PAM+ + +AL AA L   ++VST    GIL+ +
Sbjct:   29 AQSIGVCYGKHANNLPSDQDVIN-LYNANGIRKMRIYNPDTNVFNALRGSNIEIILDVPLQDLQSLTDPSRANGWVQDNIINHFPDVKFKYIAVGNEVSPGNNGQYAPFVAPAMQNVYNALAAAGLQDQIKVSTATYSGILANT 171          
BLAST of DN617602 vs. ExPASy Swiss-Prot
Match: GUB2_HORVU (Lichenase-2 (Fragment) OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.777e-14
Identity = 55/144 (38.19%), Postives = 78/144 (54.17%), Query Frame = 3
Query:   60 PSAADSIGVNYGAIANNLPPPQQVANFLKTQTTIDRVKLFDANPEFLRAFAHTNIPVTVTVGNGDIPALAKLPAAQ-SWVANNILPHHPQNIFRYIVLGNEILARSDKVLIASLLPAMRTLKSALDAANLSSVQVSTPHSLGIL 488
            P + +SIGV YG  ANNLP    V +  K    I  ++L+  N   L+A   T I V V   N  +  LA  PAA  SWV +NI  + P+  FRY+ +GNE+   + +    +L+PAM+ +  AL AA L  ++V+T  S  IL
Sbjct:    1 PPSVESIGVCYGMSANNLPAASTVVSMFKFNG-IKSMRLYAPNQAALQAVGGTGINVVVGAPNDVLSNLAASPAAAASWVKSNIQAY-PKVSFRYVCVGNEVAGGATR----NLVPAMKNVHGALVAAGLGHIKVTTSVSQAIL 138          
BLAST of DN617602 vs. ExPASy Swiss-Prot
Match: E13F_HORVU (Putative glucan endo-1,3-beta-glucosidase GVI (Fragment) OS=Hordeum vulgare PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 5.169e-14
Identity = 51/146 (34.93%), Postives = 76/146 (52.05%), Query Frame = 3
Query:   63 SAADSIGVNYGAIANNLPPPQQVANFLKTQTTIDRVKLFDANPEFLRAFAHTNIPVTVTVGNGDIPALAK-LPAAQSWVANNILPHHPQNIFRYIVLGNEILARSDKVLIASLLPAMRTLKSALDAANLSSVQVSTPHSLGILSTS 497
            +  + IGVNYG + ++LP P +V    K     D V++F  +   L A  ++ + V +   N D+  LA     A SWV + + P      FRYI  GNE++      L+   LPAM+ L++AL AA L SV V+T  +  +L TS
Sbjct:    2 AGVEGIGVNYGMMGSDLPSPDKVVALYKANNITD-VRIFHPDTNVLEALRNSGLGVVLGTLNSDLAPLASDASYAASWVHSYVQPFAGAVSFRYINAGNEVIPGESAALV---LPAMKNLEAALQAAGL-SVPVTTAMATSVLGTS 142          
BLAST of DN617602 vs. ExPASy Swiss-Prot
Match: E13A_HORVU (Glucan endo-1,3-beta-glucosidase GI OS=Hordeum vulgare PE=1 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 1.152e-13
Identity = 44/133 (33.08%), Postives = 75/133 (56.39%), Query Frame = 3
Query:   75 SIGVNYGAIANNLPPPQQVANFLKTQTTIDRVKLFDANPEFLRAFAHTNIPVTVTVGNGDIPA--LAKLPAAQSWVANNILPHHPQNIFRYIVLGNEILARSDKVLIASLLPAMRTLKSALDAANLSSVQVST 467
            +IGV YG +ANNLPP  +V    ++   +  ++++ A+ + L A   + I + + VG  D+ A   A    A +WV +N+ P++P    +YI  GNE+     +    +++PAMR L +AL A  L +++VST
Sbjct:    1 TIGVCYGVVANNLPPANEVVQLYRSNG-LTGMRIYFADAKALSALRGSGIGLILDVGGNDVLASLAANASNAANWVRDNVRPYYPAVNIKYIAAGNEVWGGDTQ----NIVPAMRNLGAALKAPGLGTIKVST 128          
BLAST of DN617602 vs. ExPASy Swiss-Prot
Match: E136_ARATH (Glucan endo-1,3-beta-glucosidase 6 OS=Arabidopsis thaliana GN=At5g58090 PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 5.716e-13
Identity = 53/154 (34.42%), Postives = 84/154 (54.55%), Query Frame = 3
Query:   51 AITPSAADSIGVNYGAIANNLPPPQQVANFLKTQTTIDRVKLFDANPEFLRAFAHTNIPVTVTVGNGDIPALA-KLPAAQSWVANNILPH-HPQNI-FRYIVLGNE-ILARSDKVLIASLLPAMRTLKSALDAANL-SSVQVSTPHSLGILSTS 497
            A+    A SIG N+G  A++  PP  V   L+ +  I +VKLFDA  + LRA   + I V V + N  +  LA  L AA+ WVA N+  H    N+  RY+ +GNE  L+  +   +++  PA+R ++ A+  A L + V+V+ P +  +  +S
Sbjct:   13 ALLCQRASSIGANWGTQASHPLPPDIVVRMLR-ENGIQKVKLFDAEYDTLRALGKSGIEVMVGIPNEMLATLASSLKAAEKWVAKNVSTHISTDNVNIRYVAVGNEPFLSTYNGSYLSTTFPALRNIQIAIIKAGLQNQVKVTCPLNADVYDSS 165          
BLAST of DN617602 vs. ExPASy Swiss-Prot
Match: E13B_NICPL (Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform OS=Nicotiana plumbaginifolia GN=GN2 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 7.465e-13
Identity = 50/153 (32.68%), Postives = 82/153 (53.59%), Query Frame = 3
Query:   48 NAITPSAADSIGVNYGAIANNLPPPQQVANFLKTQTTIDRVKLFDANPEFLRAFAHTNIPVTVTVGNGDIPALAK-LPAAQSWVANNILPHHPQNIFRYIVLGNEIL-ARSDKVLIASLLPAMRTLKSALDAANL-SSVQVSTPHSLGILSTS 497
            ++I  + A+SIGV YG + NNLP   +V    K++  I R++L+D N   L+A   +NI V + + N D+  +A  +  A+ WV  N+    P    +YI +GNEI        L + L PAM  +  A+  A L ++++VST   + ++  S
Sbjct:   25 SSIEIAGAESIGVCYGMLGNNLPNHWEVIQLYKSR-NIGRLRLYDPNHGALQALKGSNIEVMLGLPNSDVKHIASGMEHARWWVQKNVKDFWPDVKIKYIAVGNEISPVTGTSYLTSFLTPAMVNIYKAIGEAGLGNNIKVSTSVDMTLIGNS 176          
BLAST of DN617602 vs. ExPASy Swiss-Prot
Match: E132_ARATH (Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis thaliana GN=At1g66250 PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 7.465e-13
Identity = 44/139 (31.65%), Postives = 79/139 (56.83%), Query Frame = 3
Query:   78 IGVNYGAIANNLPPPQQVANFLKTQTTIDRVKLFDANPEFLRAFAHTNIPVTVTVGNGDIPALAKLPA-AQSWVANNILPHHPQNIFRYIVLGNEILARSDKVLIASLLPAMRTLKSALDAANLSS-VQVSTPHSLGIL 488
            IGVN G   +++P P QV   LK Q  I  ++L++A+P  L A A+T I V +++ N  +  + +  + A +WV  N++ H+P  +   + +G+E+L          L+ A++ + +AL +ANL   ++VSTP S  ++
Sbjct:   32 IGVNIGTDLSDMPHPTQVVALLKAQE-IRHIRLYNADPGLLIALANTGIKVIISIPNDQLLGIGQSNSTAANWVKRNVIAHYPATMITAVSVGSEVLTSLSNA-APVLVSAIKNVHAALLSANLDKLIKVSTPLSTSLI 168          
BLAST of DN617602 vs. ExPASy Swiss-Prot
Match: E13A_SOYBN (Glucan endo-1,3-beta-glucosidase OS=Glycine max PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 9.749e-13
Identity = 48/141 (34.04%), Postives = 76/141 (53.90%), Query Frame = 3
Query:   81 GVNYGAIANNLPPPQQVANFLKTQTTIDRVKLFDANPEFLRAFAHTNIPVTVTVGNGDIPALA-KLPAAQSWVANNILPHHPQNIFRYIVLGNEILARSDKVLIASLLPAMRTLKSALDAANL-SSVQVSTPHSLGILSTS 497
            GV YG + NNLP PQ+V   L  Q  I R++++  +PE L A   +NI + + + N ++  LA     A  WV +NI  +     FRY+ +GNE+  + +      L+PA+  ++ A+  A L + V+VST    G L+ S
Sbjct:   35 GVCYGRLGNNLPTPQEVV-ALYNQANIRRMRIYGPSPEVLEALRGSNIELLLDIPNDNLRNLASSQDNANKWVQDNIKNYANNVRFRYVSVGNEV--KPEHSFAQFLVPALENIQRAISNAGLGNQVKVSTAIDTGALAES 172          
BLAST of DN617602 vs. ExPASy Swiss-Prot
Match: E13E_TOBAC (Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform GGIB50 OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.273e-12
Identity = 50/153 (32.68%), Postives = 81/153 (52.94%), Query Frame = 3
Query:   48 NAITPSAADSIGVNYGAIANNLPPPQQVANFLKTQTTIDRVKLFDANPEFLRAFAHTNIPVTVTVGNGDIPALAK-LPAAQSWVANNILPHHPQNIFRYIVLGNEIL-ARSDKVLIASLLPAMRTLKSALDAANL-SSVQVSTPHSLGILSTS 497
            ++I  + A SIGV YG + NNLP   +V    K++  I R++L+D N   L+A   +NI V + + N D+  +A  +  A+ WV  N+    P    +YI +GNEI        L + L PAM  +  A+  A L ++++VST   + ++  S
Sbjct:   25 SSIDIAGAQSIGVCYGMLGNNLPNHWEVIQLYKSR-NIGRLRLYDPNHGALQALKGSNIEVMLGLPNSDVKHIASGMEHARWWVQKNVKDFWPDVKIKYIAVGNEISPVTGTSYLTSFLTPAMVNIYKAIGEAGLGNNIKVSTSVDMTLIGNS 176          
BLAST of DN617602 vs. ExPASy Swiss-Prot
Match: E13C_HORVU (Glucan endo-1,3-beta-glucosidase GIII OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.273e-12
Identity = 51/135 (37.78%), Postives = 77/135 (57.04%), Query Frame = 3
Query:   66 AADSIGVNYGAIANNLPPPQQVANFLKTQTTIDRVKLFDANPEFLRAFAHTNIPVTVTVGNGDIPALAKLP-AAQSWVANNILPHHPQNIFRYIVLGNEILARSDKVLIASLLPAMRTLKSALDAANLSSVQVST 467
            A  SIGV  G + NNLP P  V    +++  ID +++++   + L A + T I V + VG   +P+LA  P AA +WV  N+    P   FRYI + NE++   D    +++LPAMR ++ AL AA  S ++VST
Sbjct:   22 AVHSIGVCNGVLGNNLPAPSDVVTLYRSK-RIDAMRIYEPESKVLTALSGTGIAVLMDVGPA-LPSLASSPSAAAAWVKANV-SSFPGVSFRYIAVRNEVM---DSAGQSTILPAMRNVQRALAAAG-SPIKVST 149          
The following BLAST results are available for this feature:
BLAST of DN617602 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
E13G_TOBAC7.975e-1534.72Glucan endo-1,3-beta-glucosidase, acidic isoform G... [more]
GUB2_HORVU1.777e-1438.19Lichenase-2 (Fragment) OS=Hordeum vulgare PE=1 SV=... [more]
E13F_HORVU5.169e-1434.93Putative glucan endo-1,3-beta-glucosidase GVI (Fra... [more]
E13A_HORVU1.152e-1333.08Glucan endo-1,3-beta-glucosidase GI OS=Hordeum vul... [more]
E136_ARATH5.716e-1334.42Glucan endo-1,3-beta-glucosidase 6 OS=Arabidopsis ... [more]
E13B_NICPL7.465e-1332.68Glucan endo-1,3-beta-glucosidase, basic vacuolar i... [more]
E132_ARATH7.465e-1331.65Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis ... [more]
E13A_SOYBN9.749e-1334.04Glucan endo-1,3-beta-glucosidase OS=Glycine max PE... [more]
E13E_TOBAC1.273e-1232.68Glucan endo-1,3-beta-glucosidase, basic vacuolar i... [more]
E13C_HORVU1.273e-1237.78Glucan endo-1,3-beta-glucosidase GIII OS=Hordeum v... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01G23_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001G23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617602 ID=DN617602; Name=DN617602; organism=Citrus sinensis; type=EST; length=497bp
CTAAACTCTCTCAATTCCTCCTCTTCCTCTTCCTCTCCCTGTCTTGCAAC
GCCATCACCCCCTCCGCCGCTGACTCCATCGGCGTCAACTACGGCGCCAT
CGCCAACAACCTCCCGCCACCTCAGCAAGTAGCCAATTTCCTCAAAACCC
AAACCACCATAGACCGCGTCAAGCTCTTCGACGCCAACCCCGAATTCCTC
CGCGCCTTCGCCCACACAAACATCCCCGTCACCGTCACGGTCGGCAACGG
CGACATACCTGCCCTCGCAAAACTCCCCGCCGCCCAGTCCTGGGTCGCTA
ACAACATCCTGCCGCATCACCCCCAGAACATCTTCAGATACATCGTCCTC
GGCAACGAAATCTTGGCCAGGTCGGATAAAGTCCTCATCGCTTCTCTCCT
GCCCGCCATGAGAACTCTTAAATCAGCTCTCGATGCGGCCAATCTGAGCA
GCGTCCAGGTGTCGACACCTCATTCCCTGGGGATTTTATCAACCTCT
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