DN617596

Overview
NameDN617596
Unique NameDN617596
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length679
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_CYAP4 (Phosphoglycerate kinase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=pgk PE=3 SV=1)

HSP 1 Score: 263.077 bits (671), Expect = 9.789e-70
Identity = 137/208 (65.87%), Postives = 160/208 (76.92%), Query Frame = 3
Query:   72 AKKSVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGVT------PKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            +KK+V+ L  ADL GKRV VRVD NVPLDD   ITDD R+RAA+PTI+ L   GAKVILSSH GRPKG T       K+ L P+  RLSELLG  V   NDCIGEEV+  VA +  G VLLLENVRFH  EE N PEFA++LAS+ADLYVNDAFG+AHRAHASTEGV ++L+PSVAG+L++KEL YL  A+ NP++P AAIVGGSKVS
Sbjct:    2 SKKTVANLSAADLAGKRVLVRVDFNVPLDDQGKITDDTRIRAALPTIQDLTSKGAKVILSSHFGRPKGETFAERVKDKFRLTPVAARLSELLGKPVPKPNDCIGEEVKAQVAAMQNGDVLLLENVRFHPGEEANTPEFAQELASVADLYVNDAFGTAHRAHASTEGVTRYLRPSVAGYLIEKELQYLQSAIENPQRPLAAIVGGSKVS 209          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_CARHZ (Phosphoglycerate kinase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=pgk PE=3 SV=1)

HSP 1 Score: 260.381 bits (664), Expect = 6.345e-69
Identity = 129/202 (63.86%), Postives = 169/202 (83.66%), Query Frame = 3
Query:   75 KKSVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            KKS+   ++ ++KGK+VFVRVD NVPL++N  ITDD R+RAA+PT++YL   GAK+I++SHLGRPKG    KYSLKP+  RL+ELLG+EVKMA D +G EVEKM  E+  G VLLLENVRF+ EEEKNDPEFA+KLA LA+++V+DAFG+AHRAHAST G+A +L P+VAGFLM+KE+++L  A++NP++PF AI+GG+KVS
Sbjct:    3 KKSI---RDVEVKGKKVFVRVDFNVPLNENREITDDTRIRAALPTLQYLREQGAKLIVASHLGRPKGQFNEKYSLKPVAKRLAELLGIEVKMAPDVVGPEVEKMAGELRPGEVLLLENVRFYPEEEKNDPEFARKLARLAEIFVSDAFGAAHRAHASTAGIASYL-PAVAGFLMEKEINFLSRALNNPERPFVAIIGGAKVS 200          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_NOSP7 (Phosphoglycerate kinase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=pgk PE=3 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 8.287e-69
Identity = 133/202 (65.84%), Postives = 156/202 (77.23%), Query Frame = 3
Query:   72 AKKSVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGVTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            +KKS++ L  AD+ GKR  VRVD NVP+DD   ITDD R+RAA+PTI+ L   GAKVIL+SH GRPKGV  K  L P+  RLSELLG EV   +D IG+EV   VA +  G VLLLENVRF+ EEEKND EFAKKLA+ AD YVNDAFG+AHRAHASTEGV KFL PSVAG+L++KEL YL  A+ NP++P AAI+GGSKVS
Sbjct:    2 SKKSLASLSSADISGKRALVRVDFNVPVDDQGKITDDTRIRAALPTIQDLTQKGAKVILASHFGRPKGVDDKLRLTPVAKRLSELLGQEVIKTDDSIGDEVAAKVAALQNGQVLLLENVRFYPEEEKNDAEFAKKLAANADFYVNDAFGTAHRAHASTEGVTKFLSPSVAGYLVEKELQYLQNAIENPQRPLAAIIGGSKVS 203          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_THETN (Phosphoglycerate kinase OS=Thermoanaerobacter tengcongensis GN=pgk PE=3 SV=1)

HSP 1 Score: 258.84 bits (660), Expect = 1.846e-68
Identity = 132/196 (67.35%), Postives = 158/196 (80.61%), Query Frame = 3
Query:   93 LKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            +++ D+ GKRV VRVD NVP+D+N NITDD R+R A+PTI+YL+ H AKVIL SHLGRPKG   P YSLKP+  RLSELL   V MA D IGE+ +   A + EG VLLLENVRFH EEEKNDPEFAK+LASLAD+YVNDAFG+AHRAHAST GVAK+L P+VAGFL++KEL  +  A+ NPK+PF AI+GG+KVS
Sbjct:    6 VRDIDVSGKRVLVRVDFNVPMDENKNITDDRRIREALPTIEYLINHNAKVILVSHLGRPKGKFNPDYSLKPVAKRLSELLKKPVIMAEDVIGEDAKVKAAALKEGEVLLLENVRFHAEEEKNDPEFAKELASLADIYVNDAFGTAHRAHASTAGVAKYL-PAVAGFLIEKELSIMGEALENPKRPFVAILGGAKVS 200          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_DICTD (Phosphoglycerate kinase OS=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) GN=pgk PE=3 SV=1)

HSP 1 Score: 256.529 bits (654), Expect = 9.162e-68
Identity = 131/202 (64.85%), Postives = 161/202 (79.70%), Query Frame = 3
Query:   72 AKKSVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGVTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            AKK++  L++ DLKGKRV VRVD NVPL + + ITDD R+R A+PTIKYLM  GAKVIL SHLGRPKG      L P+  RLSELLG  VK  NDCIGEEVE+ ++ + EG V+LLEN+RF+KEEE NDPEFAKKLASLADLYVNDAFG+AHRAHAST GVA+++ P VAG LM+KE++ +  A+ +P++PF  I+GG+KVS
Sbjct:    2 AKKTILDLRDEDLKGKRVLVRVDFNVPLKNGV-ITDDRRIREALPTIKYLMDKGAKVILVSHLGRPKGFQDDLRLDPVAKRLSELLGKPVKKLNDCIGEEVEREISNMKEGDVILLENIRFYKEEEANDPEFAKKLASLADLYVNDAFGTAHRAHASTAGVAQYI-PGVAGLLMKKEIEIMGKALESPERPFICILGGAKVS 201          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_GLOVI (Phosphoglycerate kinase OS=Gloeobacter violaceus GN=pgk PE=3 SV=1)

HSP 1 Score: 254.988 bits (650), Expect = 2.666e-67
Identity = 130/202 (64.36%), Postives = 160/202 (79.21%), Query Frame = 3
Query:   72 AKKSVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGVTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            AKK+V  L  ADLKGKR  VRVD NVPLD++  ITDD R+RAA+PTI  L G GA+VIL SHLGRPKG   +  L P+  RL ELLG  V  A+D IG EVE+ V ++ +G VLLLENVRF+ EEEKN+PEFA+KLA LA+LYVNDAFG+AHRAHASTEGVA++L+P+VAG L+QKEL+YL  A+ +P++P  AI+GG+KVS
Sbjct:    2 AKKTVEALGAADLKGKRALVRVDFNVPLDESGQITDDTRIRAALPTIGMLTGGGARVILVSHLGRPKGFDDQLRLTPVAKRLGELLGQTVYKADDVIGPEVEEAVKKLEDGDVLLLENVRFYPEEEKNNPEFAQKLAGLAELYVNDAFGTAHRAHASTEGVARYLRPAVAGLLLQKELEYLGKALESPERPVLAIMGGAKVS 203          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_SYNS3 (Phosphoglycerate kinase OS=Synechococcus sp. (strain CC9311) GN=pgk PE=3 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 3.482e-67
Identity = 134/203 (66.01%), Postives = 154/203 (75.86%), Query Frame = 3
Query:   72 AKKSVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            AK+S++ L  +DL GKRV VRVD NVPL+D   ITDD R+RAA+PTI  L+G GAKVIL++H GRPKG V  K  L P+  RLSELL   V     CIG + E  V  +  G V+LLENVRF  EEEKND +FAK+LA LAD+YVNDAFG+AHRAHASTEGV KFLKPSVAGFLM+KEL YL GAV  PK+P AAIVGGSKVS
Sbjct:    2 AKRSLAKLNTSDLSGKRVLVRVDFNVPLNDAGAITDDTRIRAALPTINDLIGKGAKVILAAHFGRPKGQVNDKMRLTPVATRLSELLSKPVTKTESCIGPDAEAKVNAMANGDVVLLENVRFFAEEEKNDADFAKQLAGLADVYVNDAFGAAHRAHASTEGVTKFLKPSVAGFLMEKELQYLQGAVDEPKRPLAAIVGGSKVS 204          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_SYMTH (Phosphoglycerate kinase OS=Symbiobacterium thermophilum GN=pgk PE=3 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 7.756e-67
Identity = 130/200 (65.00%), Postives = 158/200 (79.00%), Query Frame = 3
Query:   81 SVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGV-TPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            ++  +++ D+KGKRVFVRVD NVPL+D   ITDD R+RAAVPTI+YL+  GA  +L+SHLGRPKG    KYSL P   RLSELLG EV  A DCIGEEVE++VAE P G V+LLENVRF+ EEEKNDPEFA KLA L +++VNDAFG+AHRAHAST GVA  +   VAGFLMQKE+D +  A+S+P +PF AI+GG+KVS
Sbjct:    2 ALMTVRDIDVKGKRVFVRVDFNVPLEDG-RITDDTRIRAAVPTIRYLVEEGAVAVLASHLGRPKGQRNEKYSLAPCARRLSELLGREVVFAPDCIGEEVERLVAEQPPGSVVLLENVRFYAEEEKNDPEFAAKLARLGEIFVNDAFGTAHRAHASTRGVADHMPVRVAGFLMQKEVDIMGKALSDPDRPFVAIIGGAKVS 200          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_PROM9 (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain MIT 9312) GN=pgk PE=3 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 7.756e-67
Identity = 129/203 (63.55%), Postives = 157/203 (77.34%), Query Frame = 3
Query:   72 AKKSVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            +K S+S L + +L+GK+V VRVD NVPL+++  ITDD R+RAA+PTI+YL+ H AKVIL++H GRPKG V  K  L P+  RLSELLG  V + N CIG+E       +  G VLLLENVRF  EEEKND EFAKKLAS AD+YVNDAFG+AHRAHAST+GV  +L PSVAGFL++KEL YL GA+ +PK+P AAIVGGSKVS
Sbjct:    2 SKLSLSSLDKTNLEGKKVLVRVDFNVPLNEDGQITDDTRIRAAIPTIEYLINHSAKVILAAHFGRPKGQVNEKMRLTPVAARLSELLGQNVALTNSCIGDEAVAQSNSLSNGDVLLLENVRFFGEEEKNDLEFAKKLASHADMYVNDAFGAAHRAHASTQGVTNYLSPSVAGFLLEKELKYLQGAIDSPKRPLAAIVGGSKVS 204          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_CYAP7 (Phosphoglycerate kinase OS=Cyanothece sp. (strain PCC 7424) GN=pgk PE=3 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 7.756e-67
Identity = 128/202 (63.37%), Postives = 157/202 (77.72%), Query Frame = 3
Query:   75 KKSVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            KK+++ L  AD++GKRV VRVD NVPLDD  NITDD R+RAA+PTI+ L+  GAKVIL SH GRPKG V     L P   RLSELLG +V M +DC+G  V + V ++  G V LLEN+RFH EEE NDPEF+K+LA+ ADLYVNDAFG+AHRAHASTEGV  +L PSVAG+L++KEL+YL  A+ NP++P AAI+GGSKVS
Sbjct:    3 KKTIANLSRADVEGKRVLVRVDFNVPLDDAGNITDDTRIRAALPTIQDLISKGAKVILCSHFGRPKGKVVESMRLTPTAKRLSELLGQDVVMCDDCVGASVTEAVNKLENGQVALLENLRFHAEEEGNDPEFSKQLAANADLYVNDAFGTAHRAHASTEGVTHYLSPSVAGYLIEKELNYLQSAIENPQRPLAAIIGGSKVS 204          
The following BLAST results are available for this feature:
BLAST of DN617596 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_CYAP49.789e-7065.87Phosphoglycerate kinase OS=Cyanothece sp. (strain ... [more]
PGK_CARHZ6.345e-6963.86Phosphoglycerate kinase OS=Carboxydothermus hydrog... [more]
PGK_NOSP78.287e-6965.84Phosphoglycerate kinase OS=Nostoc punctiforme (str... [more]
PGK_THETN1.846e-6867.35Phosphoglycerate kinase OS=Thermoanaerobacter teng... [more]
PGK_DICTD9.162e-6864.85Phosphoglycerate kinase OS=Dictyoglomus turgidum (... [more]
PGK_GLOVI2.666e-6764.36Phosphoglycerate kinase OS=Gloeobacter violaceus G... [more]
PGK_SYNS33.482e-6766.01Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_SYMTH7.756e-6765.00Phosphoglycerate kinase OS=Symbiobacterium thermop... [more]
PGK_PROM97.756e-6763.55Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_CYAP77.756e-6763.37Phosphoglycerate kinase OS=Cyanothece sp. (strain ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01G20_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001G20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617596 ID=DN617596; Name=DN617596; organism=Citrus sinensis; type=EST; length=679bp
CTCATTCCAAAATCTAACCAAAACCCTTTCTCGATTTCTCTGATCTCGTG
TTTGATCGAATCAAAATGGCCGCCAAGAAGAGTGTAAGCGTTCTAAAAGA
AGCTGATTTGAAGGGAAAGAGAGTGTTCGTACGAGTGGATCTGAACGTGC
CGTTGGATGACAACTTGAATATCACCGATGACAACAGAGTCCGTGCTGCT
GTTCCCACTATCAAATACCTGATGGGTCATGGCGCCAAAGTCATTCTCTC
CAGTCACTTGGGGCGTCCAAAGGGTGTTACACCCAAGTACAGCTTGAAAC
CTCTTGTGCCAAGGCTTTCTGAACTTCTTGGAGTTGAGGTTAAAATGGCA
AACGACTGCATTGGTGAAGAAGTTGAAAAAATGGTGGCTGAAATTCCCGA
AGGGGGCGTCTTGCTCCTCGAAAATGTGAGGTTCCATAAGGAGGAAGAGA
AGAATGACCCAGAGTTTGCTAAGAAGCTAGCTTCTCTTGCAGATCTCTAT
GTTAATGATGCATTCGGATCTGCCCATAGAGCCCATGCTTCCACTGAGGG
TGTGGCTAAGTTCTTGAAGCCTTCTGTGGCTGGTTTCCTTATGCAAAAGG
AACTAGATTATCTTGTTGGAGCTGTTTCAAATCCCAAGAAACCATTTGCT
GCCATTGTTGGTGGTTCAAAGGTGTCAAC
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