DN617596

Overview
NameDN617596
Unique NameDN617596
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length679
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_GEOMG (Phosphoglycerate kinase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=pgk PE=3 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.123e-57
Identity = 110/191 (57.59%), Postives = 142/191 (74.35%), Query Frame = 3
Query:  108 LKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGVT-PKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            LKGK+VF+RVD NVPLD++ NIT+D R+RA +PTI + +  GAKVIL+SHLGRPKG   PKYS+ P   RLS LL  EV++A DCIG+EV+KM+  +  G VLLLENVRF++ EEKND +FAK LA+  ++Y+NDAF  +HRAHAS E + KF     AGFLM  E++Y   A+  P +P  AI+GG+KVS
Sbjct:   12 LKGKKVFIRVDFNVPLDEHQNITEDTRIRAVLPTINFALDAGAKVILASHLGRPKGERKPKYSMAPAAKRLSRLLNKEVQLAPDCIGDEVKKMIDAMKPGEVLLLENVRFYEGEEKNDADFAKALANDCEIYINDAFAVSHRAHASVEAITKFFPVVAAGFLMNNEINYFEKAMQKPIRPLVAILGGAKVS 202          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_CLOPE (Phosphoglycerate kinase OS=Clostridium perfringens GN=pgk PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.466e-57
Identity = 112/198 (56.57%), Postives = 152/198 (76.77%), Query Frame = 3
Query:   93 LKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMAND--CIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            +++  +KGK+V VR D NVPL D + ITD+NR+  A+PTIKYL+ +GAKVIL SH+G+PKG   P++SL P+  RLSE+LG EV  A D   +GE  +K VAE+ +G V+LL+N R+ KEE KN  E +K+LASLA+++VNDAFG+AHRAH ST GV ++LKP+V G+L+QKEL +L  AV  P++PF AI+GG+KVS
Sbjct:    8 IEDVQVKGKKVLVRCDFNVPLKDGV-ITDENRLNGAMPTIKYLVDNGAKVILCSHMGKPKGEAKPEFSLAPVAKRLSEMLGKEVVFAADDNVVGENAKKAVAEMKDGDVVLLQNTRYRKEETKNGEELSKELASLAEMFVNDAFGTAHRAHCSTVGVTEYLKPAVCGYLIQKELKFLGDAVETPERPFVAILGGAKVS 204          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_CLOP1 (Phosphoglycerate kinase OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=pgk PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.466e-57
Identity = 112/198 (56.57%), Postives = 152/198 (76.77%), Query Frame = 3
Query:   93 LKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMAND--CIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            +++  +KGK+V VR D NVPL D + ITD+NR+  A+PTIKYL+ +GAKVIL SH+G+PKG   P++SL P+  RLSE+LG EV  A D   +GE  +K VAE+ +G V+LL+N R+ KEE KN  E +K+LASLA+++VNDAFG+AHRAH ST GV ++LKP+V G+L+QKEL +L  AV  P++PF AI+GG+KVS
Sbjct:    8 IEDVQVKGKKVLVRCDFNVPLKDGV-ITDENRLNGAMPTIKYLVDNGAKVILCSHMGKPKGEAKPEFSLAPVAKRLSEMLGKEVVFAADDNVVGENAKKAVAEMKDGDVVLLQNTRYRKEETKNGEELSKELASLAEMFVNDAFGTAHRAHCSTVGVTEYLKPAVCGYLIQKELKFLGDAVETPERPFVAILGGAKVS 204          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_BORBZ (Phosphoglycerate kinase OS=Borrelia burgdorferi (strain ZS7) GN=pgk PE=3 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 3.266e-57
Identity = 116/201 (57.71%), Postives = 149/201 (74.13%), Query Frame = 3
Query:   81 SVSVLKE-ADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGV-TPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            S+  +K+ +   GKR  VR D NVPL +  +I+DD R+RAA+ TI+YL   GA+++L SHLGRP G    KYSLKP+  RLSELLG +VKM +DCIG EV     ++ +G V+LLENVRF+ EEEKND  FAKKL+   D++VNDAFG+AHRAHAST GVA +L PSV GFLM+KE  +L G + NP++PF +I+GGSKVS
Sbjct:    2 SIKTVKDFSSFAGKRALVRCDFNVPLKEG-SISDDTRIRAALSTIEYLKERGARIVLVSHLGRPDGKKNSKYSLKPVANRLSELLGQDVKMLSDCIGSEVVNSTLQMKDGDVVLLENVRFYAEEEKNDKNFAKKLSENGDVFVNDAFGAAHRAHASTVGVADYL-PSVGGFLMEKEDKFLGGILKNPERPFVSIIGGSKVS 200          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_HYDS0 (Phosphoglycerate kinase OS=Hydrogenobaculum sp. (strain Y04AAS1) GN=pgk PE=3 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 4.266e-57
Identity = 110/195 (56.41%), Postives = 144/195 (73.85%), Query Frame = 3
Query:   93 LKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGVTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            +++ DLKGKRV VRVD NVP+D+  NI DD R+RAA+PTI+YL+   A VIL SHLGRPKG   KYSLKP+  RLS  +  +V MA DCIG+++E +V       V++LEN+RFHKEEE+ D EF+KKLASL ++YV+DAFG+ HR HAS   V + LKP+  GFL++KEL Y   A+ NP++P  A +GG+KVS
Sbjct:    7 IRDIDLKGKRVLVRVDFNVPIDNQGNIEDDARIRAAIPTIEYLLDAKAIVILMSHLGRPKGFDEKYSLKPVAKRLSRYIHKDVVMAPDCIGKDMENIVKNAKSEDVIMLENLRFHKEEEECDEEFSKKLASLGEVYVSDAFGTCHRKHASVYCVPQILKPACMGFLLEKELLYFEKAMVNPQRPVVAFLGGAKVS 201          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_GEOSF (Phosphoglycerate kinase OS=Geobacter sp. (strain FRC-32) GN=pgk PE=3 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 4.266e-57
Identity = 112/192 (58.33%), Postives = 141/192 (73.44%), Query Frame = 3
Query:  105 DLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGVT-PKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            DL+ K VF+RVD NVP DDN NIT+D R+  AVPTIKY + +GAKVIL+SHLGRPKG   PKY++ P   RLSELLG EVK A DC G +V+ MVA +  G VL+LENVRF+  EEKNDP+FA KLA+  ++YVNDAF  +HRAHAS   + K +    AGFLM+ E+ +   A++ P +P AAI+GG+KVS
Sbjct:   11 DLREKLVFIRVDFNVPQDDNGNITEDTRIVGAVPTIKYAIENGAKVILASHLGRPKGEKKPKYTMAPAARRLSELLGKEVKQATDCFGPDVDAMVAALQPGDVLMLENVRFYPGEEKNDPDFACKLANGCEIYVNDAFAVSHRAHASVHAITKCIPVIAAGFLMKNEMTFFEKAMTRPVRPLAAILGGAKVS 202          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_CLOPS (Phosphoglycerate kinase OS=Clostridium perfringens (strain SM101 / Type A) GN=pgk PE=3 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 4.266e-57
Identity = 111/198 (56.06%), Postives = 152/198 (76.77%), Query Frame = 3
Query:   93 LKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMAND--CIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            +++  +KGK+V VR D NVPL D + ITD+NR+  A+PTIKYL+ +GA+VIL SH+G+PKG   P++SL P+  RLSE+LG EV  A D   +GE  +K VAE+ +G V+LL+N R+ KEE KN  E +K+LASLA+++VNDAFG+AHRAH ST GV ++LKP+V G+L+QKEL +L  AV  P++PF AI+GG+KVS
Sbjct:    8 IEDVQVKGKKVLVRCDFNVPLKDGV-ITDENRLNGAMPTIKYLVDNGAQVILCSHMGKPKGEAKPEFSLAPVAKRLSEMLGKEVVFAADDNVVGENAKKAVAEMKDGDVVLLQNTRYRKEETKNGEELSKELASLAEMFVNDAFGTAHRAHCSTVGVTEYLKPAVCGYLIQKELKFLGDAVETPERPFVAILGGAKVS 204          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_OCEIH (Phosphoglycerate kinase OS=Oceanobacillus iheyensis GN=pgk PE=3 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 7.277e-57
Identity = 115/195 (58.97%), Postives = 146/195 (74.87%), Query Frame = 3
Query:   93 LKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKV 674
            + +  ++GKRVF RVD NVPL D   ITDD R+RAA+PTI+ L   GAKVIL+SHLGRPKG V  +  L P+  RLS+LLG EV   +   GEEV++ ++E+  GGVLL+ENVRF   EEKNDPE  +  A++ADLYVNDAFG+AHRAHAST GVA+ L P+ AG LM+KE++ L  A+ NP++PF AIVGG+KV
Sbjct:    6 INDLQVEGKRVFTRVDFNVPLKDG-EITDDTRIRAALPTIEQLTAQGAKVILASHLGRPKGTVVEELRLDPVADRLSDLLGKEVLKTDQVYGEEVDQAISELENGGVLLIENVRFEAGEEKNDPELVEAFANMADLYVNDAFGAAHRAHASTTGVAEKL-PAAAGKLMEKEIEALGNALENPERPFTAIVGGAKV 198          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_DESAP (Phosphoglycerate kinase OS=Desulforudis audaxviator (strain MP104C) GN=pgk PE=3 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 7.277e-57
Identity = 108/196 (55.10%), Postives = 148/196 (75.51%), Query Frame = 3
Query:   93 LKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGVTP-KYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            +++ D+ GKRVFVRVD NVP ++   + DD R+RA +PTI+YL+  GA VIL+SHLGRPKG    ++SL+P+  RLS L   +V+ A + +G E E    E+  G +LLLEN+RF+ EEE+NDPEFA +LA+LADLYVNDAFG+AHRAHAST G+A  L P+VAG L+++ELD L   +S P++PF A++GG+K+S
Sbjct:    6 IRDVDIAGKRVFVRVDFNVPFNERGEVADDTRIRAVLPTIEYLLTGGAAVILASHLGRPKGKRDDRFSLRPVADRLSALTARQVRFAAEAVGPETEAASRELAPGDILLLENIRFYPEEEQNDPEFASRLAALADLYVNDAFGTAHRAHASTAGIAAHL-PAVAGLLLERELDILGRLLSVPERPFVALIGGAKIS 200          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_AKKM8 (Phosphoglycerate kinase OS=Akkermansia muciniphila (strain ATCC BAA-835) GN=pgk PE=3 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 9.504e-57
Identity = 112/196 (57.14%), Postives = 145/196 (73.98%), Query Frame = 3
Query:   93 LKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGVT-PKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            +++ D KGK V +RVD NVPL D   IT+D R+ AA+PTIK+L+  GA+++L+SHLGRPK    P +SLKP+  RLSELLG +VK  +  IG E E   A + +G V+LLENVRF+  E+KNDPEFAK L   A L+VNDAFG+AHRAHASTEGV  F + S  GFL+++EL+YL G + NP+KPF  I+GG+KVS
Sbjct:    6 VRDLDAKGKEVLMRVDFNVPLKDG-EITNDARIVAALPTIKFLLDQGARLVLTSHLGRPKNEPDPAFSLKPVAARLSELLGKDVKFVSAAIGPEAEAARAAMKDGDVVLLENVRFYPGEKKNDPEFAKSLLGNATLFVNDAFGTAHRAHASTEGVTHFAEKSAMGFLIERELEYLEGKLENPEKPFVVIMGGAKVS 200          
The following BLAST results are available for this feature:
BLAST of DN617596 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_GEOMG1.123e-5757.59Phosphoglycerate kinase OS=Geobacter metallireduce... [more]
PGK_CLOPE1.466e-5756.57Phosphoglycerate kinase OS=Clostridium perfringens... [more]
PGK_CLOP11.466e-5756.57Phosphoglycerate kinase OS=Clostridium perfringens... [more]
PGK_BORBZ3.266e-5757.71Phosphoglycerate kinase OS=Borrelia burgdorferi (s... [more]
PGK_HYDS04.266e-5756.41Phosphoglycerate kinase OS=Hydrogenobaculum sp. (s... [more]
PGK_GEOSF4.266e-5758.33Phosphoglycerate kinase OS=Geobacter sp. (strain F... [more]
PGK_CLOPS4.266e-5756.06Phosphoglycerate kinase OS=Clostridium perfringens... [more]
PGK_OCEIH7.277e-5758.97Phosphoglycerate kinase OS=Oceanobacillus iheyensi... [more]
PGK_DESAP7.277e-5755.10Phosphoglycerate kinase OS=Desulforudis audaxviato... [more]
PGK_AKKM89.504e-5757.14Phosphoglycerate kinase OS=Akkermansia muciniphila... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01G20_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001G20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617596 ID=DN617596; Name=DN617596; organism=Citrus sinensis; type=EST; length=679bp
CTCATTCCAAAATCTAACCAAAACCCTTTCTCGATTTCTCTGATCTCGTG
TTTGATCGAATCAAAATGGCCGCCAAGAAGAGTGTAAGCGTTCTAAAAGA
AGCTGATTTGAAGGGAAAGAGAGTGTTCGTACGAGTGGATCTGAACGTGC
CGTTGGATGACAACTTGAATATCACCGATGACAACAGAGTCCGTGCTGCT
GTTCCCACTATCAAATACCTGATGGGTCATGGCGCCAAAGTCATTCTCTC
CAGTCACTTGGGGCGTCCAAAGGGTGTTACACCCAAGTACAGCTTGAAAC
CTCTTGTGCCAAGGCTTTCTGAACTTCTTGGAGTTGAGGTTAAAATGGCA
AACGACTGCATTGGTGAAGAAGTTGAAAAAATGGTGGCTGAAATTCCCGA
AGGGGGCGTCTTGCTCCTCGAAAATGTGAGGTTCCATAAGGAGGAAGAGA
AGAATGACCCAGAGTTTGCTAAGAAGCTAGCTTCTCTTGCAGATCTCTAT
GTTAATGATGCATTCGGATCTGCCCATAGAGCCCATGCTTCCACTGAGGG
TGTGGCTAAGTTCTTGAAGCCTTCTGTGGCTGGTTTCCTTATGCAAAAGG
AACTAGATTATCTTGTTGGAGCTGTTTCAAATCCCAAGAAACCATTTGCT
GCCATTGTTGGTGGTTCAAAGGTGTCAAC
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