DN617596

Overview
NameDN617596
Unique NameDN617596
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length679
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_CAMJR (Phosphoglycerate kinase OS=Campylobacter jejuni (strain RM1221) GN=pgk PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 4.717e-56
Identity = 105/197 (53.30%), Postives = 140/197 (71.07%), Query Frame = 3
Query:   93 LKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGVTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFL--KPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            +K+ DL  K+VF+R D NVP DD LNITDD R+R+A+PTI+Y + +G  VIL+SHLGRPK ++ KYSL+P+  RL+ LL  E+ MA D IGE+ +     +  G +LLLEN+RF K E KND   AK+LAS+  +Y+NDAFG  HRAH+S E + KF   K   AGFL+QKE+D+    + +P +PF A+VGGSKVS
Sbjct:    7 IKDIDLAKKKVFIRCDFNVPQDDFLNITDDRRIRSAIPTIRYCLDNGCSVILASHLGRPKEISSKYSLEPVAKRLARLLDKEIIMAKDVIGEDAKTKAMNLKAGEILLLENLRFEKGETKNDENLAKELASMVQVYINDAFGVCHRAHSSVEAITKFFDEKHKGAGFLLQKEIDFASNLIKHPARPFIAVVGGSKVS 203          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_GEOSM (Phosphoglycerate kinase OS=Geobacter sp. (strain M21) GN=pgk PE=3 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 6.160e-56
Identity = 107/192 (55.73%), Postives = 140/192 (72.92%), Query Frame = 3
Query:  105 DLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGVTP-KYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            +L GK++F+RVD NVPLDDN NIT+D R+RA +P+I Y +   AK+IL+SHLGRPKG    KYS+ P   RLS LLG EVK+A+DCIG+EV+ M+  +  G V++LENVRF+  EEKND +FAK LA+  D+YVNDAF  +HRAHAS E +        AGFLM+ E++Y   A+ NP +P  AI+GG+KVS
Sbjct:   11 NLSGKKLFMRVDFNVPLDDNQNITEDTRIRAVLPSINYALDQKAKIILASHLGRPKGERKEKYSMAPAAKRLSRLLGKEVKLASDCIGDEVKAMINAMQPGDVIMLENVRFYAGEEKNDADFAKALANDCDVYVNDAFAVSHRAHASVEAITNCFPVVAAGFLMKNEMNYFEKAMKNPIRPLVAILGGAKVS 202          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_GEOUR (Phosphoglycerate kinase OS=Geobacter uraniireducens (strain Rf4) GN=pgk PE=3 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 8.045e-56
Identity = 105/193 (54.40%), Postives = 140/193 (72.54%), Query Frame = 3
Query:  102 ADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGV-TPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            +DL+ K++F+RVD NVPLD++ NIT+D R+RA +PTI Y + + AKV+L+SHLGRPKG    KYS+ P   RLS LLG EVK+A DCIG+ V K++  +  G V++LEN+RF+  EEKND +FAK LA   D+YVNDAF  +HRAHAS E + KF     AGFLM+ E+ Y   ++ NP +P  AI+GG+KVS
Sbjct:   10 SDLREKKIFMRVDFNVPLDEHQNITEDTRIRAVLPTINYALDYNAKVVLASHLGRPKGERNAKYSMAPAAKRLSRLLGKEVKLAPDCIGDGVSKIIDSMQPGDVVMLENLRFYPGEEKNDDDFAKALADHCDIYVNDAFAVSHRAHASVEAITKFFPIVAAGFLMKNEMSYFEKSMKNPIRPLVAILGGAKVS 202          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_CAMJD (Phosphoglycerate kinase OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=pgk PE=3 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 8.045e-56
Identity = 104/197 (52.79%), Postives = 140/197 (71.07%), Query Frame = 3
Query:   93 LKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGVTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFL--KPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            +K+ DL  K++F+R D NVP DD LNITDD R+R+A+PTI+Y + +G  VIL+SHLGRPK ++ KYSL+P+  RL+ LL  E+ MA D IGE+ +     +  G +LLLEN+RF K E KND   AK+LAS+  +Y+NDAFG  HRAH+S E + KF   K   AGFL+QKE+D+    + +P +PF A+VGGSKVS
Sbjct:    7 IKDIDLAKKKIFIRCDFNVPQDDFLNITDDRRIRSAIPTIRYCLDNGCSVILASHLGRPKEISSKYSLEPVSKRLARLLDKEIIMAKDIIGEDAKTKAMNLKAGEILLLENLRFEKGETKNDENLAKELASMVQVYINDAFGVCHRAHSSVEAITKFFDEKHKGAGFLLQKEIDFASNLIKHPARPFVAVVGGSKVS 203          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_BACHD (Phosphoglycerate kinase OS=Bacillus halodurans GN=pgk PE=3 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.051e-55
Identity = 113/195 (57.95%), Postives = 146/195 (74.87%), Query Frame = 3
Query:   93 LKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKV 674
            +++ +L+GK+VF RVD NVP+ D + +TDD R+RAA+PTI+ L   GA++IL+SHLGRPKG V  +  L P+  RL ELLG  V   N   G E E+   E+ +G VLLLENVRF+  EEKNDPE AK  ASLAD+YVNDAFG+AHRAHASTEG+A  +  +VAG LM+KEL+ L  A+SNP++PF AI+GG+KV
Sbjct:    6 VRDVELQGKKVFCRVDFNVPMKDGV-VTDDTRIRAALPTIQLLAEKGARIILASHLGRPKGEVVEELRLDPVAARLQELLGKPVAKVNVAHGPEAEQAANELKDGDVLLLENVRFYPGEEKNDPELAKAFASLADVYVNDAFGAAHRAHASTEGIAHHV-TAVAGLLMEKELEVLGKALSNPERPFTAIIGGAKV 198          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_GEOBB (Phosphoglycerate kinase OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=pgk PE=3 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 2.341e-55
Identity = 106/192 (55.21%), Postives = 140/192 (72.92%), Query Frame = 3
Query:  105 DLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGVTP-KYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            +L GK++F+RVD NVPLDD+ NIT+D R+RA +P+I Y +   AK+IL+SHLGRPKG    KYS+ P   RLS LLG EVK+A+DCIG+EV+ M+  +  G V++LENVRF+  EEKND +FAK LA+  D+YVNDAF  +HRAHAS E +        AGFLM+ E++Y   A+ NP +P  AI+GG+KVS
Sbjct:   11 NLSGKKLFMRVDFNVPLDDHQNITEDTRIRAVLPSINYALDQKAKIILASHLGRPKGERKEKYSMAPAAKRLSRLLGKEVKLASDCIGDEVKAMINAMQPGDVIMLENVRFYAGEEKNDADFAKALANDCDVYVNDAFAVSHRAHASVEAITNCFPVVAAGFLMKNEMNYFEKAMKNPIRPLVAILGGAKVS 202          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_CLONN (Phosphoglycerate kinase OS=Clostridium novyi (strain NT) GN=pgk PE=3 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 2.341e-55
Identity = 114/204 (55.88%), Postives = 148/204 (72.55%), Query Frame = 3
Query:   75 KKSVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMAND--CIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            K +   +++  +KGK+V VR D NVPL D + ITD+NR+  A+PTIKYL+  GAKVIL SHLG+PKG   P+ SL P+  RLSELL  EV  A D   +GE  +K VAE+ +G V+LL+N R+ KEE KN+  F+K+LASLAD++VNDAFG+AHRAH ST GVA FL  +  G+L+QKEL +L  AV  P +PF AI+GG+KVS
Sbjct:    2 KLNKKTVEDIQVKGKKVLVRCDFNVPLKDGV-ITDENRLVGAMPTIKYLVNEGAKVILCSHLGKPKGEAKPELSLAPVAKRLSELLEKEVVFAADDTVVGENAKKAVAEMKDGDVVLLQNTRYRKEETKNEENFSKELASLADVFVNDAFGTAHRAHCSTVGVADFLNEAACGYLIQKELKFLGDAVETPVRPFVAILGGAKVS 204          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_SULDN (Phosphoglycerate kinase OS=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) GN=pgk PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 3.993e-55
Identity = 109/198 (55.05%), Postives = 141/198 (71.21%), Query Frame = 3
Query:   93 LKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFL--KPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            +K  DL GK+VF+R D NVP+D+  NI+DD R+R+AV TI Y +     VIL+SHLGRP+G V  KYSL P+  R+  LL  EV +A+D +GE+  K  +E+  G VL+LEN+R+   E KND E +KKLAS+AD Y+NDAFG +HRAHAS EG+  F   K   AGFL+QKE+D+L   + NP +PFAAIVGGSKVS
Sbjct:    6 IKNLDLAGKKVFIRCDFNVPMDEFGNISDDRRIRSAVSTINYCLDQECAVILASHLGRPEGEVVDKYSLIPIARRIQHLLRREVDLASDVVGEDALKRASELKSGQVLMLENLRYEAGETKNDKELSKKLASMADFYINDAFGVSHRAHASVEGITHFFDDKHKAAGFLLQKEIDFLGKIIQNPVRPFAAIVGGSKVS 203          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_GEOLS (Phosphoglycerate kinase OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=pgk PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 3.993e-55
Identity = 105/192 (54.69%), Postives = 139/192 (72.40%), Query Frame = 3
Query:  105 DLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGVTP-KYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            DLKGK+VF+RVD NVP D+  NIT+D R+  AVPTIKY +  GAKV+L+SHLGRPKG    KY++ P   RLS+LLG +V  A DC G +V K++  +  G V++LENVRF+  EEKNDPEFA++L +  ++YVNDAF  +HRAHAS E + K +    AGFLM+ E+ +   A+SNP +P  AI+GG+KVS
Sbjct:   11 DLKGKKVFIRVDFNVPQDEKGNITEDTRIAGAVPTIKYAVEQGAKVVLASHLGRPKGEKKSKYTMAPAAKRLSQLLGKKVMQAPDCFGPDVSKIIDSMKPGDVVMLENVRFYPGEEKNDPEFAQQLVNGCEIYVNDAFAVSHRAHASVEAITKLVPTIAAGFLMKNEMTFFDKAMSNPVRPLVAILGGAKVS 202          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_PELPD (Phosphoglycerate kinase OS=Pelobacter propionicus (strain DSM 2379) GN=pgk PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 5.215e-55
Identity = 107/193 (55.44%), Postives = 140/193 (72.54%), Query Frame = 3
Query:  102 ADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGV-TPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            ADLK K+VF+RVD NVP D   NIT+D R+  A+PTI+Y +  GA+VIL+SHLGRPKG    KYS+ P   RLSELLG +VK A+DC GEEV + +  +  G VL+LENVRF+  EEKNDP+FA++LA+   +YVNDAF  +HRAHAS E + + +   VAGFLM+ E+ +   A+ NP +P  AI+GG+KVS
Sbjct:   10 ADLKDKKVFIRVDFNVPQDSKGNITEDTRITGALPTIRYAIEQGARVILASHLGRPKGEKNEKYSMVPAAKRLSELLGRKVKQASDCFGEEVTREIDAMKSGEVLMLENVRFYPGEEKNDPKFAQQLANGCQVYVNDAFAVSHRAHASVEAITRVIPTVVAGFLMRNEMTFFDKAMQNPVRPLVAILGGAKVS 202          
The following BLAST results are available for this feature:
BLAST of DN617596 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_CAMJR4.717e-5653.30Phosphoglycerate kinase OS=Campylobacter jejuni (s... [more]
PGK_GEOSM6.160e-5655.73Phosphoglycerate kinase OS=Geobacter sp. (strain M... [more]
PGK_GEOUR8.045e-5654.40Phosphoglycerate kinase OS=Geobacter uraniireducen... [more]
PGK_CAMJD8.045e-5652.79Phosphoglycerate kinase OS=Campylobacter jejuni su... [more]
PGK_BACHD1.051e-5557.95Phosphoglycerate kinase OS=Bacillus halodurans GN=... [more]
PGK_GEOBB2.341e-5555.21Phosphoglycerate kinase OS=Geobacter bemidjiensis ... [more]
PGK_CLONN2.341e-5555.88Phosphoglycerate kinase OS=Clostridium novyi (stra... [more]
PGK_SULDN3.993e-5555.05Phosphoglycerate kinase OS=Sulfurimonas denitrific... [more]
PGK_GEOLS3.993e-5554.69Phosphoglycerate kinase OS=Geobacter lovleyi (stra... [more]
PGK_PELPD5.215e-5555.44Phosphoglycerate kinase OS=Pelobacter propionicus ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01G20_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001G20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617596 ID=DN617596; Name=DN617596; organism=Citrus sinensis; type=EST; length=679bp
CTCATTCCAAAATCTAACCAAAACCCTTTCTCGATTTCTCTGATCTCGTG
TTTGATCGAATCAAAATGGCCGCCAAGAAGAGTGTAAGCGTTCTAAAAGA
AGCTGATTTGAAGGGAAAGAGAGTGTTCGTACGAGTGGATCTGAACGTGC
CGTTGGATGACAACTTGAATATCACCGATGACAACAGAGTCCGTGCTGCT
GTTCCCACTATCAAATACCTGATGGGTCATGGCGCCAAAGTCATTCTCTC
CAGTCACTTGGGGCGTCCAAAGGGTGTTACACCCAAGTACAGCTTGAAAC
CTCTTGTGCCAAGGCTTTCTGAACTTCTTGGAGTTGAGGTTAAAATGGCA
AACGACTGCATTGGTGAAGAAGTTGAAAAAATGGTGGCTGAAATTCCCGA
AGGGGGCGTCTTGCTCCTCGAAAATGTGAGGTTCCATAAGGAGGAAGAGA
AGAATGACCCAGAGTTTGCTAAGAAGCTAGCTTCTCTTGCAGATCTCTAT
GTTAATGATGCATTCGGATCTGCCCATAGAGCCCATGCTTCCACTGAGGG
TGTGGCTAAGTTCTTGAAGCCTTCTGTGGCTGGTTTCCTTATGCAAAAGG
AACTAGATTATCTTGTTGGAGCTGTTTCAAATCCCAAGAAACCATTTGCT
GCCATTGTTGGTGGTTCAAAGGTGTCAAC
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