DN617596

Overview
NameDN617596
Unique NameDN617596
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length679
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_PROMM (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain MIT 9313) GN=pgk PE=3 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 1.910e-65
Identity = 129/203 (63.55%), Postives = 153/203 (75.37%), Query Frame = 3
Query:   72 AKKSVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            AK+S+S L  ADL+ KRV VRVD NVPL++N  ITDD R+RAA+PTI  L+  GA+VILS+H GRPKG +     L P+  RLSELLG  V     C+G + E  V  + +G V+LLENVRF  EEEKND  FA+KLA+LAD YVNDAFG+AHRAHASTEGV KFL PSVAG LM+KEL YL GA+ +PK+P AAIVGGSKVS
Sbjct:    2 AKRSLSNLSAADLRSKRVLVRVDFNVPLNENGAITDDTRIRAALPTINDLIDKGARVILSAHFGRPKGQINEGMRLTPVAKRLSELLGKNVTKTESCVGSDAEAKVNAMADGDVVLLENVRFFSEEEKNDANFAQKLAALADAYVNDAFGAAHRAHASTEGVTKFLNPSVAGHLMEKELQYLQGAIDDPKRPLAAIVGGSKVS 204          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_PROM5 (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain MIT 9515) GN=pgk PE=3 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 1.910e-65
Identity = 126/203 (62.07%), Postives = 158/203 (77.83%), Query Frame = 3
Query:   72 AKKSVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            +K S+S L ++ L+GK+V VRVD NVPL+D+  ITDD R+RAA+PTIKYL+ + AKVIL++H GRPKG V  +  L P+  RLSE+LG +V +   CIGEE  +    +  G VLLLENVRF++EEEKND  FAK LA+ AD+YVNDAFG+AHRAHAST+GV KFL+PSVAGFL++KEL YL GA+  P +P AAIVGGSKVS
Sbjct:    2 SKLSLSSLDKSKLEGKKVLVRVDFNVPLNDDGQITDDTRIRAAIPTIKYLINNSAKVILAAHFGRPKGKVNERMRLTPIAARLSEILGKKVNLTESCIGEEALEKSNNLNNGDVLLLENVRFYEEEEKNDLNFAKNLAAHADMYVNDAFGAAHRAHASTQGVTKFLEPSVAGFLLEKELKYLQGAIDAPNRPLAAIVGGSKVS 204          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_PROM3 (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain MIT 9303) GN=pgk PE=3 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 3.259e-65
Identity = 129/203 (63.55%), Postives = 153/203 (75.37%), Query Frame = 3
Query:   72 AKKSVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            AK+S+S L  ADL+ KRV VRVD NVPL++N  ITDD R+RAA+PTI  L+  GA+VILS+H GRPKG +     L P+  RLSELLG  V     C+G + E  V  + +G V+LLENVRF  EEEKND  FA+KLA+LAD YVNDAFG+AHRAHASTEGV KFL PSVAG LM+KEL YL GA+ +PK+P AAIVGGSKVS
Sbjct:    2 AKRSLSSLSAADLRSKRVLVRVDFNVPLNENGAITDDTRIRAALPTINDLIDKGARVILSAHFGRPKGQINEGMRLTPVAKRLSELLGKTVIKTESCVGSDAEAKVNAMADGDVVLLENVRFFSEEEKNDANFAQKLAALADAYVNDAFGAAHRAHASTEGVTKFLNPSVAGHLMEKELQYLQGAIDDPKRPLAAIVGGSKVS 204          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_SYNP2 (Phosphoglycerate kinase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=pgk PE=3 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 5.559e-65
Identity = 128/203 (63.05%), Postives = 154/203 (75.86%), Query Frame = 3
Query:   72 AKKSVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            AKKSV+ L EADL GKRVFVRVD NVPL+++  ITDD R+RAA+PTIKYL   GAKVIL SH+GRPKG V     L P+  RLSELLG  V   +DC+G+ V + +A +  G V LLEN+RF+  EEKNDPEFAK+LA+ AD+YVNDAFG+AHRAH STEGV   +  SVAG L++KEL +L GA+  PK+P  AIVGGSKVS
Sbjct:    2 AKKSVANLTEADLSGKRVFVRVDFNVPLNESGVITDDTRIRAALPTIKYLTEKGAKVILGSHMGRPKGQVVDSMRLTPVAARLSELLGQSVTKCDDCVGDAVNQAIANLGNGQVALLENLRFNPGEEKNDPEFAKQLAANADIYVNDAFGTAHRAHGSTEGVTHHVDTSVAGLLIEKELQFLKGAIEAPKRPLVAIVGGSKVS 204          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_PROMP (Phosphoglycerate kinase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=pgk PE=3 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 7.260e-65
Identity = 126/203 (62.07%), Postives = 158/203 (77.83%), Query Frame = 3
Query:   72 AKKSVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            +K S+S L ++ L+GK+V VRVD NVPL+D+  ITDD R+RAA+PTIKYL+ + AKVIL++H GRPKG V  K  L P+  RLS++L  +V +   CIGEE       +  G VLLLENVRF++EEEKND +FAK LAS AD+YVNDAFG+AHRAHAST+GV KFL+P+VAGFL++KEL YL GA+  PK+P AAIVGGSKVS
Sbjct:    2 SKLSLSSLDKSKLEGKKVLVRVDFNVPLNDSGQITDDTRIRAAIPTIKYLINNSAKVILAAHFGRPKGKVNEKMRLTPVAARLSDILEQKVNLTESCIGEEALAKSNSLNNGEVLLLENVRFYEEEEKNDLDFAKNLASHADMYVNDAFGAAHRAHASTQGVTKFLEPAVAGFLLEKELKYLQGAIDAPKRPLAAIVGGSKVS 204          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_ACAM1 (Phosphoglycerate kinase OS=Acaryochloris marina (strain MBIC 11017) GN=pgk PE=3 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 7.260e-65
Identity = 128/203 (63.05%), Postives = 151/203 (74.38%), Query Frame = 3
Query:   72 AKKSVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            +KK+++ L  ADL GKRV VR D NVPLD +  ITDD R+RAA+PTI+ L   GAKVIL+SH GRPKG V     L P+  RLSELLG  V   +DCIG+EV   V  +  G V LLENVRFH  EE NDPEFA++LAS+ADLYVNDAFG+AHRAHASTEGV   L PSVAG+L++KEL YL  A+  P++P AAIVGGSKVS
Sbjct:    2 SKKTIANLTSADLSGKRVLVRADFNVPLDGDGKITDDTRIRAALPTIQDLTSKGAKVILASHFGRPKGQVNESMRLTPVAARLSELLGQAVTKCDDCIGDEVAAKVGALQNGQVALLENVRFHSGEEANDPEFARQLASVADLYVNDAFGTAHRAHASTEGVTHHLSPSVAGYLIEKELKYLQAAIEGPQRPLAAIVGGSKVS 204          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_PROMA (Phosphoglycerate kinase OS=Prochlorococcus marinus GN=pgk PE=3 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 9.481e-65
Identity = 130/203 (64.04%), Postives = 156/203 (76.85%), Query Frame = 3
Query:   72 AKKSVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            AK+S+S L   DL GKRV VRVD NVPL++  +ITDD R+RAA+PTI++L+   A+VILS+H GRPKG V     L P+  RLSELLG  V     CIG + EK V E+  G V+LLENVRF  EEEKND EFAKKLASLA++YVNDAFG+AHRAHASTEGV  +L PSVAG+LM+KEL YL GA+ +P++P AAIVGGSKVS
Sbjct:    2 AKRSLSNLSVEDLCGKRVLVRVDFNVPLNEEGSITDDTRIRAALPTIQHLIEKEARVILSAHFGRPKGKVNEDMRLTPVSQRLSELLGKTVVKTESCIGPDAEKKVHEMSNGDVVLLENVRFIGEEEKNDSEFAKKLASLAEVYVNDAFGAAHRAHASTEGVTNYLSPSVAGYLMEKELKYLQGAIDSPQRPLAAIVGGSKVS 204          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_PROM0 (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain MIT 9301) GN=pgk PE=3 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 1.238e-64
Identity = 127/203 (62.56%), Postives = 154/203 (75.86%), Query Frame = 3
Query:   72 AKKSVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            +K S+S L +  L+GK+V VRVD NVPL+++  ITDD R+RAA+PTI+YL+ H AKVIL++H GRPKG V  K  L P+  RLSELLG  V + N CIG+E       +    VLLLENVRF  EEEKND EFA+KLAS AD+YVNDAFG+AHRAHAST+GV  +L PSVAGFL++KEL YL GAV +P +P AAIVGGSKVS
Sbjct:    2 SKLSLSSLDKTHLEGKKVLVRVDFNVPLNEDGQITDDTRIRAAIPTIEYLVNHSAKVILAAHFGRPKGQVNEKMRLTPVAARLSELLGQSVALTNSCIGDEAVAKSNSLSNRDVLLLENVRFFGEEEKNDLEFAQKLASHADMYVNDAFGAAHRAHASTQGVTNYLSPSVAGFLLEKELKYLQGAVDSPNRPLAAIVGGSKVS 204          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_THEEB (Phosphoglycerate kinase OS=Thermosynechococcus elongatus (strain BP-1) GN=pgk PE=3 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 1.617e-64
Identity = 126/202 (62.38%), Postives = 153/202 (75.74%), Query Frame = 3
Query:   72 AKKSVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGVTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            +KKSV+ L  ADL+GKRV VRVD NVP+D+   ITD+ R+RAA+PTI+ L+  GAKVIL SH GRPKGV  K  L P+  RLSELL   V   +DCIG+ V      +  G V LLENVRFH  EEKNDPEFAK+LA+ A++YVNDAFG+AHRAHAST GV ++L P VAGFLM+KEL+YL  A+ +P++P AAIVGGSKVS
Sbjct:    2 SKKSVAQLSAADLEGKRVLVRVDFNVPVDEKGVITDETRIRAALPTIQDLISKGAKVILVSHFGRPKGVDEKLRLTPVAQRLSELLHKPVAKLDDCIGDAVIAHTQAMANGDVCLLENVRFHPGEEKNDPEFAKQLAACAEVYVNDAFGTAHRAHASTAGVTQYLSPCVAGFLMEKELEYLQNAIEHPRRPLAAIVGGSKVS 203          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_CYAP8 (Phosphoglycerate kinase OS=Cyanothece sp. (strain PCC 8801) GN=pgk PE=3 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 2.759e-64
Identity = 127/202 (62.87%), Postives = 152/202 (75.25%), Query Frame = 3
Query:   75 KKSVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            KKS+  L  AD+ GKRV VRVD NVPLD    ITDD R+RAA+PTIK L+  GAKVIL SH GRPKG V     L P+  RLSELLG  V M +DCIG+ V   + ++  G V LLEN+RFH EEE NDPEFA+KLA+ ADLYVNDAFG+AHRAHASTEGV  +L P+VAG+L++KEL+YL  A+ NP++P  AI+GGSKVS
Sbjct:    3 KKSIVNLSPADVAGKRVLVRVDFNVPLD-GATITDDTRIRAALPTIKDLIEKGAKVILCSHFGRPKGQVVESMRLTPVATRLSELLGQPVVMCDDCIGDSVTAAINQLQNGQVALLENLRFHAEEEANDPEFAQKLAANADLYVNDAFGTAHRAHASTEGVTHYLSPNVAGYLIEKELNYLQAAIENPQRPLVAIIGGSKVS 203          
The following BLAST results are available for this feature:
BLAST of DN617596 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_PROMM1.910e-6563.55Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_PROM51.910e-6562.07Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_PROM33.259e-6563.55Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_SYNP25.559e-6563.05Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_PROMP7.260e-6562.07Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_ACAM17.260e-6563.05Phosphoglycerate kinase OS=Acaryochloris marina (s... [more]
PGK_PROMA9.481e-6564.04Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_PROM01.238e-6462.56Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_THEEB1.617e-6462.38Phosphoglycerate kinase OS=Thermosynechococcus elo... [more]
PGK_CYAP82.759e-6462.87Phosphoglycerate kinase OS=Cyanothece sp. (strain ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01G20_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001G20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617596 ID=DN617596; Name=DN617596; organism=Citrus sinensis; type=EST; length=679bp
CTCATTCCAAAATCTAACCAAAACCCTTTCTCGATTTCTCTGATCTCGTG
TTTGATCGAATCAAAATGGCCGCCAAGAAGAGTGTAAGCGTTCTAAAAGA
AGCTGATTTGAAGGGAAAGAGAGTGTTCGTACGAGTGGATCTGAACGTGC
CGTTGGATGACAACTTGAATATCACCGATGACAACAGAGTCCGTGCTGCT
GTTCCCACTATCAAATACCTGATGGGTCATGGCGCCAAAGTCATTCTCTC
CAGTCACTTGGGGCGTCCAAAGGGTGTTACACCCAAGTACAGCTTGAAAC
CTCTTGTGCCAAGGCTTTCTGAACTTCTTGGAGTTGAGGTTAAAATGGCA
AACGACTGCATTGGTGAAGAAGTTGAAAAAATGGTGGCTGAAATTCCCGA
AGGGGGCGTCTTGCTCCTCGAAAATGTGAGGTTCCATAAGGAGGAAGAGA
AGAATGACCCAGAGTTTGCTAAGAAGCTAGCTTCTCTTGCAGATCTCTAT
GTTAATGATGCATTCGGATCTGCCCATAGAGCCCATGCTTCCACTGAGGG
TGTGGCTAAGTTCTTGAAGCCTTCTGTGGCTGGTTTCCTTATGCAAAAGG
AACTAGATTATCTTGTTGGAGCTGTTTCAAATCCCAAGAAACCATTTGCT
GCCATTGTTGGTGGTTCAAAGGTGTCAAC
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