DN617596

Overview
NameDN617596
Unique NameDN617596
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length679
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_MICAN (Phosphoglycerate kinase OS=Microcystis aeruginosa (strain NIES-843) GN=pgk PE=3 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 6.146e-64
Identity = 128/203 (63.05%), Postives = 155/203 (76.35%), Query Frame = 3
Query:   75 KKSVSVLKEADLKGKRVFVRVDLNVPLDDNLN-ITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            KK+V+ L EADL GKRV VRVD NVP+D     I+DD R+RAA+PTI+ L+  GAKVIL SH+GRP G V     L P+  RLSELLG EV M  DCIGE V   ++++  G V LLEN+RFH EEE NDP+FAKKLA+ ADLYVNDAFG+AHRAHASTEGV  +L PSVAG+L++KEL+YL  A+  P++P AAI+GGSKVS
Sbjct:    3 KKTVANLTEADLAGKRVLVRVDFNVPMDKATGAISDDTRIRAALPTIEDLIKKGAKVILCSHMGRPDGQVKENLRLTPVAKRLSELLGQEVIMCPDCIGEGVTAAISQMSNGQVALLENLRFHGEEEANDPDFAKKLAANADLYVNDAFGTAHRAHASTEGVTHYLSPSVAGYLIEKELNYLQAAIETPQRPLAAIIGGSKVS 205          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_SYNE7 (Phosphoglycerate kinase OS=Synechococcus elongatus (strain PCC 7942) GN=pgk PE=3 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 8.027e-64
Identity = 127/203 (62.56%), Postives = 149/203 (73.40%), Query Frame = 3
Query:   72 AKKSVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGV-TPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            +K++++ L  ADL+GKRV VRVD NVPLD N  ITDD R+RAA+PTI+YL   GAKVIL SH GRPKG       L P+  RLSELLG  V    D +G   E  VA    G V+LLENVRFH EEE ND EFAK LASLAD+YVNDAFG+AHRAHAST GV ++L P VAG+L++KEL YL  A+ NP++P AAIVGGSKVS
Sbjct:    2 SKRTLASLTAADLEGKRVLVRVDFNVPLDGNGKITDDTRIRAALPTIRYLSESGAKVILVSHFGRPKGKPVESMRLTPVAERLSELLGRPVVKTTDAVGAGAEAQVAATSNGQVVLLENVRFHAEEEANDAEFAKALASLADIYVNDAFGAAHRAHASTAGVTEYLSPCVAGYLLEKELQYLQAAIDNPQRPLAAIVGGSKVS 204          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_PROM4 (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain MIT 9211) GN=pgk PE=3 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 1.048e-63
Identity = 125/203 (61.58%), Postives = 155/203 (76.35%), Query Frame = 3
Query:   72 AKKSVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            AK+S+S L   +L GKRVFVRVD NVP++   +ITDD R+RAA+PTIK L+  GA+VILS+H GRPKG V     L P+  RLSELLG  V   + CIG + +     +  G V+LLENVRF + EEKNDP+FAK+L+ LA++YVNDAFG+AHRAHASTEGV KFL P+VAG+LM+KEL YL GA+ +PK+P AAIVGGSKVS
Sbjct:    2 AKRSLSSLSAEELCGKRVFVRVDFNVPVNAEGDITDDTRIRAALPTIKDLIDKGARVILSAHFGRPKGQVNDAMRLTPVAQRLSELLGHTVIKTDSCIGSDAQAKAQSLNNGDVMLLENVRFIQGEEKNDPDFAKELSELAEVYVNDAFGAAHRAHASTEGVTKFLSPNVAGYLMEKELQYLQGAIDSPKRPLAAIVGGSKVS 204          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_ACIBL (Phosphoglycerate kinase OS=Acidobacteria bacterium (strain Ellin345) GN=pgk PE=3 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 1.369e-63
Identity = 123/202 (60.89%), Postives = 150/202 (74.26%), Query Frame = 3
Query:   93 LKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGV-TPKYSLKPLVPRLSELL------GVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            +K+  L  KRVF+RVD NVPLD+N  +TDD R+R  +PTI+Y + HGAK+IL SHLGRPKG   PK SLKP+  RL  +L      G  V  + DCIG + ++M  ++ +G  LLLENVRFH EEEKNDP FAK+LASL +LYVNDAFGSAHRAHASTEG+  +++ S AG LMQKELDYL  A SNP KPF AI+GG+KVS
Sbjct:    6 IKDLQLSNKRVFMRVDFNVPLDENGRVTDDTRIRETLPTIEYALRHGAKLILCSHLGRPKGKPNPKMSLKPVAERLRVMLDHAISPGQNVGFSPDCIGMQAQEMAKQLEKGQALLLENVRFHAEEEKNDPAFAKELASLCELYVNDAFGSAHRAHASTEGITHYVEKSAAGLLMQKELDYLGKATSNPAKPFVAILGGAKVS 207          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_SYNP6 (Phosphoglycerate kinase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=pgk PE=3 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 3.050e-63
Identity = 126/203 (62.07%), Postives = 148/203 (72.91%), Query Frame = 3
Query:   72 AKKSVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGV-TPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            +K++++ L  ADL+GKRV VRVD NVPLD N  ITDD R+RAA+PTI+YL   GAKVIL SH GRPKG       L P+  RLSELLG  V    D +G   E  VA    G V+LLENVRFH EEE ND EFAK LASLAD+YVNDAFG+AHRAHA T GV ++L P VAG+L++KEL YL  A+ NP++P AAIVGGSKVS
Sbjct:    2 SKRTLASLTAADLEGKRVLVRVDFNVPLDGNGKITDDTRIRAALPTIRYLSESGAKVILVSHFGRPKGKPVESMRLTPVAERLSELLGRPVVKTTDAVGAGAEAQVAATSNGQVVLLENVRFHAEEEANDAEFAKALASLADIYVNDAFGAAHRAHAPTAGVTEYLSPCVAGYLLEKELQYLQAAIDNPQRPLAAIVGGSKVS 204          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_BACP2 (Phosphoglycerate kinase OS=Bacillus pumilus (strain SAFR-032) GN=pgk PE=3 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 2.582e-62
Identity = 123/201 (61.19%), Postives = 157/201 (78.11%), Query Frame = 3
Query:   75 KKSVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKV 674
            KKSV   K+ D+KGK VF RVD NVP+ D   +TDD R+RAA+PTI+YL G GAKV+L+SHLGRPKG VT +  L P+  RL ELLG EVK A++  G+ V+K ++++ +G VL+LENVRF+  EEKNDPE +K  A LAD+YVNDAFG+AHRAHAST G+A +L P+V+GFLMQKEL+ L  A+SNP +PF AI+GG+KV
Sbjct:    3 KKSV---KDIDVKGKVVFCRVDFNVPMKDG-KVTDDTRIRAALPTIEYLTGQGAKVLLASHLGRPKGQVTEELRLTPVAKRLQELLGQEVKKADEAYGDNVKKQISDLKDGDVLVLENVRFYPGEEKNDPELSKAFADLADVYVNDAFGAAHRAHASTAGIAAYL-PAVSGFLMQKELEVLGKAISNPDRPFTAIIGGAKV 198          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_SYNJA (Phosphoglycerate kinase OS=Synechococcus sp. (strain JA-3-3Ab) GN=pgk PE=3 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 3.372e-62
Identity = 124/201 (61.69%), Postives = 149/201 (74.13%), Query Frame = 3
Query:  105 DLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRP----------KGVTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            DLKGKRV VR D NVPLD   NITDD R+RA++PTI+ L   GAKVIL+SHLGRP          +      SL P+  RL++LLG  V  A DCIG E E +V+ +  G V LLENVRFH EEE NDPEFA+KLASLADL+VNDAFGSAHRAHAST GV  +L+P+VAG+L++KEL +L GA+ NP++P AAI+GGSKVS
Sbjct:   15 DLKGKRVLVRADFNVPLDPQGNITDDTRIRASLPTIQALAQAGAKVILTSHLGRPIQKDKATGAIQIAREGNSLAPVAVRLAQLLGQPVAFAPDCIGPEAEAVVSSLENGQVALLENVRFHPEEEANDPEFARKLASLADLFVNDAFGSAHRAHASTAGVTAYLQPAVAGYLVEKELQFLSGAIENPQRPLAAIIGGSKVS 215          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_ANADF (Phosphoglycerate kinase OS=Anaeromyxobacter sp. (strain Fw109-5) GN=pgk PE=3 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 7.513e-62
Identity = 117/202 (57.92%), Postives = 157/202 (77.72%), Query Frame = 3
Query:   81 SVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGVTP---KYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            ++  +   DL GKRVF+RVD NVPLD+   +TDD R+RAA+PTIK+ +   AKVIL SHLGRPKG      K+SL+P   RLSELL  +V +A+DCIG+ V+K+V ++ EG VLLLEN+RFH +EEKND  FA++LA+L D++VNDAFG+AHRAHAST G+A F+K   AGFL+QKE++YL  A+ +P++PF A++GG+KVS
Sbjct:    2 ALKTIDALDLAGKRVFIRVDFNVPLDEQRRVTDDARIRAALPTIKHAIQARAKVILGSHLGRPKGKPDDREKFSLEPAAQRLSELLKQDVILADDCIGDGVKKLVRDLKEGQVLLLENLRFHPQEEKNDEGFARELATLCDVWVNDAFGTAHRAHASTAGMAAFVKEKAAGFLIQKEVEYLGKALGSPERPFVALIGGAKVS 203          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_ANADE (Phosphoglycerate kinase OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=pgk PE=3 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 7.513e-62
Identity = 119/194 (61.34%), Postives = 154/194 (79.38%), Query Frame = 3
Query:  105 DLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGVTP---KYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            DL GKRVF+RVD NVPLD    +TDD R+RAA+PTI++ +   AKVIL+SHLGRPKG      K +L+P   RLSELL  +V +A+DC+G+ V+K+V ++ +G VLLLEN+RFH EEEKND  FA++LASLAD++VNDAFG+AHRAHAST G+AKF+K   AGFL+QKE++YL  A+ +P +PF AIVGG+KVS
Sbjct:   10 DLAGKRVFIRVDFNVPLDPQGKVTDDARIRAALPTIRHAIQAKAKVILASHLGRPKGKPDDRTKLTLEPAAVRLSELLSQDVILADDCVGDGVKKLVRDLKDGHVLLLENLRFHPEEEKNDEAFARELASLADVWVNDAFGTAHRAHASTAGMAKFVKEKAAGFLVQKEVEYLGKALGSPARPFVAIVGGAKVS 203          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_PROM1 (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain NATL1A) GN=pgk PE=3 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.281e-61
Identity = 127/203 (62.56%), Postives = 146/203 (71.92%), Query Frame = 3
Query:   72 AKKSVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            +K+S+S L   DL GKRV VRVD NVPL D   ITDD R+RAA+PTI  L+   A+VILS+H GRPKG V     L  +  RLSELLG  V     CIG E +  V  +  G V+LLENVRF   EEKND EFAK+LASLA++YVNDAFG+AHRAHASTEGV KFL P VAG+LM+KEL YL GA+  PK P AAIVGGSKVS
Sbjct:    2 SKRSLSSLGAEDLCGKRVLVRVDFNVPLGDEGQITDDTRIRAALPTINDLLDKSARVILSAHFGRPKGEVNETMRLTAVAQRLSELLGKTVVKTESCIGAEAKSKVDAMSNGDVVLLENVRFISGEEKNDTEFAKELASLAEVYVNDAFGAAHRAHASTEGVTKFLSPCVAGYLMEKELKYLQGAIDQPKSPLAAIVGGSKVS 204          
The following BLAST results are available for this feature:
BLAST of DN617596 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_MICAN6.146e-6463.05Phosphoglycerate kinase OS=Microcystis aeruginosa ... [more]
PGK_SYNE78.027e-6462.56Phosphoglycerate kinase OS=Synechococcus elongatus... [more]
PGK_PROM41.048e-6361.58Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_ACIBL1.369e-6360.89Phosphoglycerate kinase OS=Acidobacteria bacterium... [more]
PGK_SYNP63.050e-6362.07Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_BACP22.582e-6261.19Phosphoglycerate kinase OS=Bacillus pumilus (strai... [more]
PGK_SYNJA3.372e-6261.69Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_ANADF7.513e-6257.92Phosphoglycerate kinase OS=Anaeromyxobacter sp. (s... [more]
PGK_ANADE7.513e-6261.34Phosphoglycerate kinase OS=Anaeromyxobacter dehalo... [more]
PGK_PROM11.281e-6162.56Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01G20_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001G20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617596 ID=DN617596; Name=DN617596; organism=Citrus sinensis; type=EST; length=679bp
CTCATTCCAAAATCTAACCAAAACCCTTTCTCGATTTCTCTGATCTCGTG
TTTGATCGAATCAAAATGGCCGCCAAGAAGAGTGTAAGCGTTCTAAAAGA
AGCTGATTTGAAGGGAAAGAGAGTGTTCGTACGAGTGGATCTGAACGTGC
CGTTGGATGACAACTTGAATATCACCGATGACAACAGAGTCCGTGCTGCT
GTTCCCACTATCAAATACCTGATGGGTCATGGCGCCAAAGTCATTCTCTC
CAGTCACTTGGGGCGTCCAAAGGGTGTTACACCCAAGTACAGCTTGAAAC
CTCTTGTGCCAAGGCTTTCTGAACTTCTTGGAGTTGAGGTTAAAATGGCA
AACGACTGCATTGGTGAAGAAGTTGAAAAAATGGTGGCTGAAATTCCCGA
AGGGGGCGTCTTGCTCCTCGAAAATGTGAGGTTCCATAAGGAGGAAGAGA
AGAATGACCCAGAGTTTGCTAAGAAGCTAGCTTCTCTTGCAGATCTCTAT
GTTAATGATGCATTCGGATCTGCCCATAGAGCCCATGCTTCCACTGAGGG
TGTGGCTAAGTTCTTGAAGCCTTCTGTGGCTGGTTTCCTTATGCAAAAGG
AACTAGATTATCTTGTTGGAGCTGTTTCAAATCCCAAGAAACCATTTGCT
GCCATTGTTGGTGGTTCAAAGGTGTCAAC
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