DN617596

Overview
NameDN617596
Unique NameDN617596
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length679
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_THET8 (Phosphoglycerate kinase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=pgk PE=1 SV=3)

HSP 1 Score: 173.711 bits (439), Expect = 7.811e-43
Identity = 98/196 (50.00%), Postives = 131/196 (66.84%), Query Frame = 3
Query:   93 LKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGVTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAE-IPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            L + D KGKRV VRVD NVP+ D   + D+ R+  ++PT+++L+  GA ++L SHLGRPKG  PKYSL P+   L   L  E + A    G E  +  AE +  G VLLLENVRF   EEKNDPE + + A L + +V DAFGSAHRAHAS  GVA+ L P+ AGFLM+KE+  L   + +P++P+A ++GG+KVS
Sbjct:    4 LLDLDPKGKRVLVRVDYNVPVQDG-KVQDETRILESLPTLRHLLAGGASLVLLSHLGRPKGPDPKYSLAPVGEALRAHLP-EARFAPFPPGSEEARREAEALRPGEVLLLENVRFEPGEEKNDPELSARYARLGEAFVLDAFGSAHRAHASVVGVARLL-PAYAGFLMEKEVRALSRLLKDPERPYAVVLGGAKVS 196          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_LACS1 (Phosphoglycerate kinase OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=pgk PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 7.811e-43
Identity = 95/206 (46.12%), Postives = 136/206 (66.02%), Query Frame = 3
Query:   90 VLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGVTPK--YSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFH----KEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFL----KPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            ++ + D+KGK+V +RVD NVP+ + + I +DNR+ AA+PTI Y++ H  K IL SHLGR K    K   SL+P+  RL+ELL   V       G ++E  +  + +G VLL+EN RF     K+E  NDPE  K  ASL D++VNDAFG+AHR+HAS  G+++ +    K + AG+L++KE+ +L  AV +PK PF AI+GG+KVS
Sbjct:    5 IVSDLDVKGKKVLMRVDFNVPIKNGV-IGNDNRIVAALPTINYIIEHDGKAILFSHLGRIKKEEDKKELSLRPVAERLAELLNKPVTFVPATRGAQLEDAINNMNDGDVLLVENTRFEDLDGKKESGNDPELGKYWASLGDVFVNDAFGTAHRSHASNVGISEAMKAEGKQAAAGYLLEKEIKFLGNAVDSPKHPFVAILGGAKVS 209          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_JANMA (Phosphoglycerate kinase OS=Janthinobacterium sp. (strain Marseille) GN=pgk PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 7.811e-43
Identity = 96/206 (46.60%), Postives = 131/206 (63.59%), Query Frame = 3
Query:   66 MAAKKSVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG--VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            M  K+   ++   +L+GKRVF+R DLNVP D   NIT+D R+RA+VP I+  +  GA V+++SHLGRP      P  +L P+  RLSELLG  V +  + +         ++  G V+LLEN R +K E+KND   A+K+A+L D+YVNDAFG+AHRA A+T G+AK+   + AG L+  ELD L  A+  P  P  AIV GSKVS
Sbjct:    1 MQFKRLSDLIARGELQGKRVFIRADLNVPQDSTGNITEDTRIRASVPAIQQALQAGAAVMVTSHLGRPVEGEFKPADTLAPIAQRLSELLGQPVALKQNWVDG------VDVAPGQVVLLENCRVNKGEKKNDDALAQKIAALCDVYVNDAFGTAHRAEATTHGIAKYAPVACAGPLLAAELDALGKALGEPASPLVAIVAGSKVS 200          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_DEIGD (Phosphoglycerate kinase OS=Deinococcus geothermalis (strain DSM 11300) GN=pgk PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 7.811e-43
Identity = 97/200 (48.50%), Postives = 130/200 (65.00%), Query Frame = 3
Query:   84 VSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPK-GVTPKYSLKPLVPRLSELLGVEVK-MANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            +  L + D+ GKRV VRVD NVP+ D + + D+ RV A++PT+++L+  GA ++L SHLGRPK G   KYSL+P+   L   LG  VK +A+    EE  + V  +  G V LLENVRF   EEKNDPE  ++LA L D +V DAFGSAHRAHAS  GVA  L P  AG L+  E++ L   + +P +P+  I+GG+KVS
Sbjct:    1 MQTLDQLDVNGKRVLVRVDYNVPIKDGV-VQDETRVTASLPTLQHLLARGAALVLLSHLGRPKNGPEEKYSLRPVAAVLERALGRPVKFIASLPSSEETRRAVESLQPGEVALLENVRFEPGEEKNDPELVEQLARLGDAFVLDAFGSAHRAHASVSGVAGRL-PHAAGLLLHNEVEALSRLLHDPARPYVVIIGGAKVS 198          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGKB_TRYBB (Phosphoglycerate kinase, cytosolic OS=Trypanosoma brucei brucei PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 7.811e-43
Identity = 101/226 (44.69%), Postives = 140/226 (61.95%), Query Frame = 3
Query:   66 MAAKKSVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGVT-----------------PKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEE--EKNDPE---FAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            M+ K+  S+  E DLKGK+V +RVD NVPLDD  NIT+D R+R+A+P ++ ++  G   +L SHLGRPKGV+                  K +LKP+   LSELL   V  A DC+      +V+++  G V+LLENVRF+KEE  +K+  E    AK L+S  D+Y++DAFG+AHR  A+  G+ K L    AG+LM+KE+ Y    + NP +P  AIVGG+KVS
Sbjct:    1 MSLKERKSI-NECDLKGKKVLIRVDFNVPLDDG-NITNDYRIRSALPAVQKVLTEGGSCVLMSHLGRPKGVSMAEGKELGSAGGIPGFEQKATLKPVAKALSELLSRPVTFAPDCLN--AADVVSKMSPGDVVLLENVRFYKEEGSKKSTEEREAMAKILSSYGDVYISDAFGTAHRDSATMTGIPKILGNGAAGYLMEKEISYFAKVLGNPPRPLVAIVGGAKVS 222          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_HAEI8 (Phosphoglycerate kinase OS=Haemophilus influenzae (strain 86-028NP) GN=pgk PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.332e-42
Identity = 97/201 (48.26%), Postives = 132/201 (65.67%), Query Frame = 3
Query:   81 SVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG--VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            SV  + + DL GKRVF+R DLNVP+ D   +T D R+RA +PT+K  +  GAKV+++SHLGRP     TP+ SL+P+V  L    G  V++  D +         ++ +G +++LENVR +K E+KNDPE  KK A+L D++V DAFG+AHRA AST GVA+F   + AG L+  ELD L  A+  P +P  AIVGGSKVS
Sbjct:    2 SVIKMTDLDLAGKRVFIRADLNVPVKDG-KVTSDARIRATIPTLKLALEKGAKVMVTSHLGRPTEGEFTPEDSLQPVVDYLKNA-GFNVRLEQDYLNG------VDVKDGEIVVLENVRINKGEKKNDPELGKKYAALCDVFVMDAFGTAHRAQASTYGVAEFAPIACAGPLLAAELDALGKALKEPARPMVAIVGGSKVS 194          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_DEIRA (Phosphoglycerate kinase OS=Deinococcus radiodurans GN=pgk PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.332e-42
Identity = 101/197 (51.27%), Postives = 125/197 (63.45%), Query Frame = 3
Query:   93 LKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPK-GVTPKYSLKPLVPRLSELLGVEVKMANDCIG-EEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            L + D+KGKRV VRVD NVP+ D + + DD R+ A+VPTIK L+  GA V+L SH GRPK G   KYSLKP+   +S  LG +VK      G +E  + V  +  G V LLENVRF   EEKND     KLA L D +V DAFGSAHRAH+S  GVA  L P  AG L+Q E+D L   +  P+ P+  I+GG+KVS
Sbjct:   26 LSQLDVKGKRVLVRVDYNVPVGDGV-VQDDTRITASVPTIKKLLDGGASVVLMSHFGRPKNGPEDKYSLKPVAEAVSRALGQDVKFIPSLPGSDETLQAVQALRPGEVALLENVRFEAGEEKNDAALNDKLAKLGDAFVLDAFGSAHRAHSSVSGVAGKL-PHAAGGLLQSEVDALGKLLHAPEHPYVVIIGGAKVS 220          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_THET2 (Phosphoglycerate kinase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=pgk PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.740e-42
Identity = 97/196 (49.49%), Postives = 131/196 (66.84%), Query Frame = 3
Query:   93 LKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGVTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAE-IPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            L + D KGKRV VRVD NVP+ D   + D+ R+  ++PT+++L+  GA ++L SHLGRPKG  P+YSL P+   L   L  E + A    G E  +  AE +  G VLLLENVRF   EEKNDPE + + A L + +V DAFGSAHRAHAS  GVA+ L P+ AGFLM+KE+  L   + +P++P+A ++GG+KVS
Sbjct:    4 LLDLDPKGKRVLVRVDYNVPVQDG-KVQDETRILESLPTLRHLLAGGASLVLLSHLGRPKGPDPRYSLAPVGEALRAHLP-EARFAPFPPGSEEARREAEALRPGEVLLLENVRFEPGEEKNDPELSARYARLGEAFVLDAFGSAHRAHASVVGVARLL-PAYAGFLMEKEVRALSRLLKDPERPYAVVLGGAKVS 196          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_TETTH (Phosphoglycerate kinase OS=Tetrahymena thermophila GN=PGK PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.740e-42
Identity = 94/206 (45.63%), Postives = 132/206 (64.08%), Query Frame = 3
Query:  108 LKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAK-VILSSHLGRPKGV-TPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEE---------------KNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKV 674
            ++ KRV +RVD NVPL +   + D  R++ +VP+IK ++    K ++L SHLGRP G    K+S+KP+VP+L ELLG +V   NDC+G++VE+ V     G ++LLEN+RFH EEE               K   EF K L SL DL+VNDAFG+AHRAH+S  GV    K   AG+L+++ELDY   A+ +P +PF  ++GG+KV
Sbjct:   15 IENKRVLMRVDFNVPLKEG-KVKDPTRIQGSVPSIKKILEQNPKGLVLMSHLGRPDGNRVEKHSMKPVVPKLEELLGTKVTFLNDCVGKDVEEAVKSSRNGEIILLENLRFHPEEEGKYIDAAGNKVKADSKAVKEFRKSLTSLGDLFVNDAFGTAHRAHSSMVGVDH--KIRAAGYLLKRELDYFSKALESPNRPFLVVLGGAKV 217          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_LACRJ (Phosphoglycerate kinase OS=Lactobacillus reuteri (strain JCM 1112) GN=pgk PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.740e-42
Identity = 95/206 (46.12%), Postives = 133/206 (64.56%), Query Frame = 3
Query:   93 LKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGVT--PKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFH--------KEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLK-PSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            +++  L+GK+V +RVD NVP+ D + + DDNR+ AA+PTIKY++ HG + IL SHLGR K     P  SL+P+  RLS LL   V       G+++E  +  +  G VLL++N R+         K E  NDPE  K  ASL D++VNDAFG+AHR HAS  G+A  +   + AG+LM+KE+ +L  AV NP++PF AI+GG+KVS
Sbjct:    6 VEDLPLEGKKVLMRVDFNVPIKDGV-VGDDNRIVAALPTIKYVIDHGGRAILFSHLGRIKKEEDKPGLSLRPVAERLSNLLNKPVTFVPVTEGKQLEDAIDNMKNGDVLLVQNTRYEDVKDGEYVKRESGNDPELGKYWASLGDVFVNDAFGTAHRKHASNVGIATNMPGKAAAGYLMEKEIKFLGDAVDNPERPFVAILGGAKVS 210          
The following BLAST results are available for this feature:
BLAST of DN617596 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_THET87.811e-4350.00Phosphoglycerate kinase OS=Thermus thermophilus (s... [more]
PGK_LACS17.811e-4346.12Phosphoglycerate kinase OS=Lactobacillus salivariu... [more]
PGK_JANMA7.811e-4346.60Phosphoglycerate kinase OS=Janthinobacterium sp. (... [more]
PGK_DEIGD7.811e-4348.50Phosphoglycerate kinase OS=Deinococcus geothermali... [more]
PGKB_TRYBB7.811e-4344.69Phosphoglycerate kinase, cytosolic OS=Trypanosoma ... [more]
PGK_HAEI81.332e-4248.26Phosphoglycerate kinase OS=Haemophilus influenzae ... [more]
PGK_DEIRA1.332e-4251.27Phosphoglycerate kinase OS=Deinococcus radiodurans... [more]
PGK_THET21.740e-4249.49Phosphoglycerate kinase OS=Thermus thermophilus (s... [more]
PGK_TETTH1.740e-4245.63Phosphoglycerate kinase OS=Tetrahymena thermophila... [more]
PGK_LACRJ1.740e-4246.12Phosphoglycerate kinase OS=Lactobacillus reuteri (... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01G20_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001G20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617596 ID=DN617596; Name=DN617596; organism=Citrus sinensis; type=EST; length=679bp
CTCATTCCAAAATCTAACCAAAACCCTTTCTCGATTTCTCTGATCTCGTG
TTTGATCGAATCAAAATGGCCGCCAAGAAGAGTGTAAGCGTTCTAAAAGA
AGCTGATTTGAAGGGAAAGAGAGTGTTCGTACGAGTGGATCTGAACGTGC
CGTTGGATGACAACTTGAATATCACCGATGACAACAGAGTCCGTGCTGCT
GTTCCCACTATCAAATACCTGATGGGTCATGGCGCCAAAGTCATTCTCTC
CAGTCACTTGGGGCGTCCAAAGGGTGTTACACCCAAGTACAGCTTGAAAC
CTCTTGTGCCAAGGCTTTCTGAACTTCTTGGAGTTGAGGTTAAAATGGCA
AACGACTGCATTGGTGAAGAAGTTGAAAAAATGGTGGCTGAAATTCCCGA
AGGGGGCGTCTTGCTCCTCGAAAATGTGAGGTTCCATAAGGAGGAAGAGA
AGAATGACCCAGAGTTTGCTAAGAAGCTAGCTTCTCTTGCAGATCTCTAT
GTTAATGATGCATTCGGATCTGCCCATAGAGCCCATGCTTCCACTGAGGG
TGTGGCTAAGTTCTTGAAGCCTTCTGTGGCTGGTTTCCTTATGCAAAAGG
AACTAGATTATCTTGTTGGAGCTGTTTCAAATCCCAAGAAACCATTTGCT
GCCATTGTTGGTGGTTCAAAGGTGTCAAC
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