DN617596

Overview
NameDN617596
Unique NameDN617596
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length679
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_FRATT (Phosphoglycerate kinase OS=Francisella tularensis subsp. tularensis GN=pgk PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 6.612e-42
Identity = 93/201 (46.27%), Postives = 130/201 (64.68%), Query Frame = 3 
Query:   81 SVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG--VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            S   LK+ DLK K+V VRVD NVP+ D   +T   R+ AA+PTI+Y++  G  VIL SHLGRP       ++SL+P+   LSE++   VK A D +         ++  G +++ ENVRF+  E+K+  + +KK+ASL D++V DAF +AHRA AST GVAK++  + AG L+  E+  L  A+ +PKKP AAIVGGSKVS
Sbjct:    2 SFLTLKDVDLKDKKVLVRVDFNVPVKDG-KVTSKVRIEAAIPTIQYILDQGGAVILMSHLGRPTEGEYDSQFSLEPVAKALSEIINKPVKFAKDWLDG------VDVKAGEIVMCENVRFNSGEKKSTDDLSKKIASLGDVFVMDAFATAHRAQASTYGVAKYIPVACAGILLTNEIQALEKALKSPKKPMAAIVGGSKVS 195
[Close]
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_FRATN (Phosphoglycerate kinase OS=Francisella tularensis subsp. novicida (strain U112) GN=pgk PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 6.612e-42
Identity = 93/201 (46.27%), Postives = 130/201 (64.68%), Query Frame = 3 
Query:   81 SVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG--VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            S   LK+ DLK K+V VRVD NVP+ D   +T   R+ AA+PTI+Y++  G  VIL SHLGRP       ++SL+P+   LSE++   VK A D +         ++  G +++ ENVRF+  E+K+  + +KK+ASL D++V DAF +AHRA AST GVAK++  + AG L+  E+  L  A+ +PKKP AAIVGGSKVS
Sbjct:    2 SFLTLKDVDLKDKKVLVRVDFNVPVKDG-KVTSKVRIEAAIPTIQYILDQGGAVILMSHLGRPTEGEYDSQFSLEPVAKALSEIINKPVKFAKDWLDG------VDVKAGEIVMCENVRFNSGEKKSTDDLSKKIASLGDVFVMDAFATAHRAQASTYGVAKYIPVACAGILLTNEIQALEKALKSPKKPMAAIVGGSKVS 195
[Close]
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_FRATM (Phosphoglycerate kinase OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=pgk PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 6.612e-42
Identity = 92/201 (45.77%), Postives = 130/201 (64.68%), Query Frame = 3 
Query:   81 SVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRP--KGVTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            S   LK+ DLK K+V VRVD NVP+ D   +T   R+ AA+PTI+Y++  G  VIL SHLGRP       ++SL+P+   LSE++   VK A D +         ++  G +++ ENVRF+  E+K+  + +KK+ASL D++V DAF +AHRA AST GVAK++  + AG L+  E+  L  A+ +PKKP AAIVGGSK+S
Sbjct:    2 SFLTLKDVDLKDKKVLVRVDFNVPVKDG-KVTSKVRIEAAIPTIQYILDQGGAVILMSHLGRPTESEYDSQFSLEPVAKALSEIINKPVKFAKDWLDG------VDVKAGEIVMCENVRFNSGEKKSTDDLSKKIASLGDVFVMDAFATAHRAQASTYGVAKYIPVACAGILLTNEIQALEKALKSPKKPMAAIVGGSKIS 195
[Close]
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_FRAT1 (Phosphoglycerate kinase OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=pgk PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 6.612e-42
Identity = 93/201 (46.27%), Postives = 130/201 (64.68%), Query Frame = 3 
Query:   81 SVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG--VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            S   LK+ DLK K+V VRVD NVP+ D   +T   R+ AA+PTI+Y++  G  VIL SHLGRP       ++SL+P+   LSE++   VK A D +         ++  G +++ ENVRF+  E+K+  + +KK+ASL D++V DAF +AHRA AST GVAK++  + AG L+  E+  L  A+ +PKKP AAIVGGSKVS
Sbjct:    2 SFLTLKDVDLKDKKVLVRVDFNVPVKDG-KVTSKVRIEAAIPTIQYILDQGGAVILMSHLGRPTEGEYDSQFSLEPVAKALSEIINKPVKFAKDWLDG------VDVKAGEIVMCENVRFNSGEKKSTDDLSKKIASLGDVFVMDAFATAHRAQASTYGVAKYIPVACAGILLTNEIQALEKALKSPKKPMAAIVGGSKVS 195
[Close]
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_MARMS (Phosphoglycerate kinase OS=Marinomonas sp. (strain MWYL1) GN=pgk PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 8.636e-42
Identity = 97/198 (48.99%), Postives = 133/198 (67.17%), Query Frame = 3 
Query:   93 LKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG--VTPKYSLKPLVPRLSELLGVEVKMANDCI-GEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            +K+ DL  KRV +R DLNVP+ D   +T D R+RAA+PTIK  +  GAKV++ SHLGRP       +YSL+P+   ++ LLG +V +  D + G EVE        G ++L+ENVRF+  E+K+D   +KK+A+L D++V DAFG+AHRA AST GVAKF   + AG L+  EL+ L  A++ P +P AAIVGGSKVS
Sbjct:    6 MKDVDLANKRVLIREDLNVPVKDG-KVTSDARIRAALPTIKMALEAGAKVMVMSHLGRPTEGQYEEEYSLQPVATHIAGLLGQDVPLVKDWLDGVEVES-------GQLVLVENVRFNLGEKKDDEALSKKMAALCDVFVMDAFGTAHRAQASTHGVAKFAPIACAGPLLSAELEALEKALAKPARPMAAIVGGSKVS 195
[Close]
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_HAES2 (Phosphoglycerate kinase OS=Haemophilus somnus (strain 2336) GN=pgk PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 8.636e-42
Identity = 96/201 (47.76%), Postives = 134/201 (66.67%), Query Frame = 3 
Query:   81 SVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG--VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            SV  + + DL GKRVF+R DLNVP+ +   +T D R++A +PT+K  +  GAKV+++SHLGRP      P+ SL+P+V  L    G  V++A D +         E+ EG +++LENVR +K E+KNDPE +KK A+L D++V DAFG+AHRA AST GVA+F   + AG L+  EL+ L  A+  P++P  AIVGGSKVS
Sbjct:    2 SVIKMTDLDLAGKRVFIRADLNVPVKEG-KVTSDARIKATIPTLKLALEKGAKVMVTSHLGRPTEGEFKPEDSLQPVVDYLKGA-GFNVRLAQDYLNG------VEVNEGEIVVLENVRVNKGEKKNDPELSKKYAALCDVFVMDAFGTAHRAQASTYGVAEFAPVACAGPLLAAELEALGKALKEPQRPMLAIVGGSKVS 194
[Close]
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_HAEIN (Phosphoglycerate kinase OS=Haemophilus influenzae GN=pgk PE=1 SV=2)

HSP 1 Score: 170.244 bits (430), Expect = 8.636e-42
Identity = 96/201 (47.76%), Postives = 131/201 (65.17%), Query Frame = 3 
Query:   81 SVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG--VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            SV  + + DL GKRVF+R DLNVP+ D   +T D R+RA +PT+K  +  GAKV+++SHLGRP      P+ SL+P+V  L    G  V++  D +         ++ +G +++LENVR +K E+KNDPE  KK A+L D++V DAFG+AHRA AST GVA+F   + AG L+  ELD L  A+  P +P  AIVGGSKVS
Sbjct:    2 SVIKMTDLDLAGKRVFIRADLNVPVKDG-KVTSDARIRATIPTLKLALEKGAKVMVTSHLGRPTEGEFKPEDSLQPVVDYLKNA-GFNVRLEQDYLNG------VDVKDGEIVVLENVRVNKGEKKNDPELGKKYAALCDVFVMDAFGTAHRAQASTYGVAEFAPIACAGPLLAAELDALGKALKEPARPMVAIVGGSKVS 194
[Close]
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_HAEIG (Phosphoglycerate kinase OS=Haemophilus influenzae (strain PittGG) GN=pgk PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 8.636e-42
Identity = 96/201 (47.76%), Postives = 131/201 (65.17%), Query Frame = 3 
Query:   81 SVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG--VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            SV  + + DL GKRVF+R DLNVP+ D   +T D R+RA +PT+K  +  GAKV+++SHLGRP      P+ SL+P+V  L    G  V++  D +         ++ +G +++LENVR +K E+KNDPE  KK A+L D++V DAFG+AHRA AST GVA+F   + AG L+  ELD L  A+  P +P  AIVGGSKVS
Sbjct:    2 SVIKMTDLDLAGKRVFIRADLNVPVKDG-KVTSDARIRATIPTLKLALEKGAKVMVTSHLGRPTEGEFKPEDSLQPVVDYLKNA-GFNVRLEQDYLNG------VDVKDGEIVVLENVRVNKGEKKNDPELGKKYAALCDVFVMDAFGTAHRAQASTYGVAEFAPIACAGPLLAAELDALGKALKEPARPMVAIVGGSKVS 194
[Close]
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_HAEIE (Phosphoglycerate kinase OS=Haemophilus influenzae (strain PittEE) GN=pgk PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 8.636e-42
Identity = 96/201 (47.76%), Postives = 131/201 (65.17%), Query Frame = 3 
Query:   81 SVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG--VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            SV  + + DL GKRVF+R DLNVP+ D   +T D R+RA +PT+K  +  GAKV+++SHLGRP      P+ SL+P+V  L    G  V++  D +         ++ +G +++LENVR +K E+KNDPE  KK A+L D++V DAFG+AHRA AST GVA+F   + AG L+  ELD L  A+  P +P  AIVGGSKVS
Sbjct:    2 SVIKMTDLDLAGKRVFIRADLNVPVKDG-KVTSDARIRATIPTLKLALEKGAKVMVTSHLGRPTEGEFKPEDSLQPVVDYLKNA-GFNVRLEQDYLNG------VDVKDGEIVVLENVRVNKGEKKNDPELGKKYAALCDVFVMDAFGTAHRAQASTYGVAEFAPIACAGPLLAAELDALGKALKEPARPMVAIVGGSKVS 194
[Close]
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_FRAAA (Phosphoglycerate kinase OS=Frankia alni (strain ACN14a) GN=pgk PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 8.636e-42
Identity = 103/207 (49.76%), Postives = 130/207 (62.80%), Query Frame = 3 
Query:   93 LKEADLKGKRVFVRVDLNVPLD---DNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGE----EVEKMVAEIPEGGVLLLENVRFHKEEEKND----PEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            + +  + G RV VR DLNVPLD   D   ITDD RVRA+VPTI  L+  GA+VI++SHLGRPKG   P+YSL+P+  RL ELLG  V  A D  G+       ++VA + +G V LLEN+RF   E   D      FA  LA+LA+ YV DAFG+ HRAHAS   V K L P  AG L+  ELD L    ++P +P+A ++GGSKVS
Sbjct:    4 IDDLQVAGHRVLVRSDLNVPLDRSGDTPRITDDGRVRASVPTIAALLDRGARVIVTSHLGRPKGEPDPRYSLEPVAARLGELLGRPVAFAGDGTGDIAGAHAREVVAGLGDGEVALLENLRFSPGETSKDAVTRASFADALAALAEFYVGDAFGAVHRAHASVADVPKRL-PHAAGRLVLTELDVLRRLSADPARPYAVVLGGSKVS 209
The following BLAST results are available for this feature:
BLAST of DN617596 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_FRATT6.612e-4246.27Phosphoglycerate kinase OS=Francisella tularensis ... [more]
PGK_FRATN6.612e-4246.27Phosphoglycerate kinase OS=Francisella tularensis ... [more]
PGK_FRATM6.612e-4245.77Phosphoglycerate kinase OS=Francisella tularensis ... [more]
PGK_FRAT16.612e-4246.27Phosphoglycerate kinase OS=Francisella tularensis ... [more]
PGK_MARMS8.636e-4248.99Phosphoglycerate kinase OS=Marinomonas sp. (strain... [more]
PGK_HAES28.636e-4247.76Phosphoglycerate kinase OS=Haemophilus somnus (str... [more]
PGK_HAEIN8.636e-4247.76Phosphoglycerate kinase OS=Haemophilus influenzae ... [more]
PGK_HAEIG8.636e-4247.76Phosphoglycerate kinase OS=Haemophilus influenzae ... [more]
PGK_HAEIE8.636e-4247.76Phosphoglycerate kinase OS=Haemophilus influenzae ... [more]
PGK_FRAAA8.636e-4249.76Phosphoglycerate kinase OS=Frankia alni (strain AC... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS11_01G20_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001G20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617596 ID=DN617596; Name=DN617596; organism=Citrus sinensis; type=EST; length=679bp
CTCATTCCAAAATCTAACCAAAACCCTTTCTCGATTTCTCTGATCTCGTG
TTTGATCGAATCAAAATGGCCGCCAAGAAGAGTGTAAGCGTTCTAAAAGA
AGCTGATTTGAAGGGAAAGAGAGTGTTCGTACGAGTGGATCTGAACGTGC
CGTTGGATGACAACTTGAATATCACCGATGACAACAGAGTCCGTGCTGCT
GTTCCCACTATCAAATACCTGATGGGTCATGGCGCCAAAGTCATTCTCTC
CAGTCACTTGGGGCGTCCAAAGGGTGTTACACCCAAGTACAGCTTGAAAC
CTCTTGTGCCAAGGCTTTCTGAACTTCTTGGAGTTGAGGTTAAAATGGCA
AACGACTGCATTGGTGAAGAAGTTGAAAAAATGGTGGCTGAAATTCCCGA
AGGGGGCGTCTTGCTCCTCGAAAATGTGAGGTTCCATAAGGAGGAAGAGA
AGAATGACCCAGAGTTTGCTAAGAAGCTAGCTTCTCTTGCAGATCTCTAT
GTTAATGATGCATTCGGATCTGCCCATAGAGCCCATGCTTCCACTGAGGG
TGTGGCTAAGTTCTTGAAGCCTTCTGTGGCTGGTTTCCTTATGCAAAAGG
AACTAGATTATCTTGTTGGAGCTGTTTCAAATCCCAAGAAACCATTTGCT
GCCATTGTTGGTGGTTCAAAGGTGTCAAC
back to top