DN617596

Overview
NameDN617596
Unique NameDN617596
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length679
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_YERPB (Phosphoglycerate kinase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=pgk PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 3.281e-41
Identity = 96/201 (47.76%), Postives = 131/201 (65.17%), Query Frame = 3
Query:   81 SVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG--VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            SV  + + DL GKRV +R DLNVP+ +   +T D R+RA++PTI+  +  GAKV+++SHLGRP       ++SL P+V  L E L   V++A D +         EI  G +++LENVRF+K E+K+D   +KK A+L D+YV DAFG+AHRA AST GV KF   + AG L+  EL+ L  A+ NP +P  AIVGGSKVS
Sbjct:    2 SVIKMTDLDLAGKRVLIRADLNVPVKEG-KVTSDARIRASLPTIEAALKQGAKVMVTSHLGRPTEGEYNEEFSLLPVVNYLKEKLSSPVRLAKDYLDG------VEIAAGELVVLENVRFNKGEKKDDEALSKKYAALCDVYVMDAFGTAHRAQASTHGVGKFAPIACAGPLLSAELEALGKALGNPARPMVAIVGGSKVS 195          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_YERPA (Phosphoglycerate kinase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=pgk PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 3.281e-41
Identity = 96/201 (47.76%), Postives = 131/201 (65.17%), Query Frame = 3
Query:   81 SVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG--VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            SV  + + DL GKRV +R DLNVP+ +   +T D R+RA++PTI+  +  GAKV+++SHLGRP       ++SL P+V  L E L   V++A D +         EI  G +++LENVRF+K E+K+D   +KK A+L D+YV DAFG+AHRA AST GV KF   + AG L+  EL+ L  A+ NP +P  AIVGGSKVS
Sbjct:    2 SVIKMTDLDLAGKRVLIRADLNVPVKEG-KVTSDARIRASLPTIEAALKQGAKVMVTSHLGRPTEGEYNEEFSLLPVVNYLKEKLSSPVRLAKDYLDG------VEIAAGELVVLENVRFNKGEKKDDEALSKKYAALCDVYVMDAFGTAHRAQASTHGVGKFAPIACAGPLLSAELEALGKALGNPARPMVAIVGGSKVS 195          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_YERP3 (Phosphoglycerate kinase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=pgk PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 3.281e-41
Identity = 96/201 (47.76%), Postives = 131/201 (65.17%), Query Frame = 3
Query:   81 SVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG--VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            SV  + + DL GKRV +R DLNVP+ +   +T D R+RA++PTI+  +  GAKV+++SHLGRP       ++SL P+V  L E L   V++A D +         EI  G +++LENVRF+K E+K+D   +KK A+L D+YV DAFG+AHRA AST GV KF   + AG L+  EL+ L  A+ NP +P  AIVGGSKVS
Sbjct:    2 SVIKMTDLDLAGKRVLIRADLNVPVKEG-KVTSDARIRASLPTIEAALKQGAKVMVTSHLGRPTEGEYNEEFSLLPVVNYLKEKLSSPVRLAKDYLDG------VEIAAGELVVLENVRFNKGEKKDDEALSKKYAALCDVYVMDAFGTAHRAQASTHGVGKFAPIACAGPLLSAELEALGKALGNPARPMVAIVGGSKVS 195          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_VIBPA (Phosphoglycerate kinase OS=Vibrio parahaemolyticus GN=pgk PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 3.281e-41
Identity = 95/201 (47.26%), Postives = 133/201 (66.17%), Query Frame = 3
Query:   81 SVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG--VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            SV  + + DL GKRVF+R DLNVP+ D   +T D R+ A++PTIK+ +  GAKV+++SHLGRP       ++SL+P+V  L++ L  EVK+A D +         E+  G +++LENVRF+K E+KN+ E +KK A+L D++V DAFG+AHRA AST GV      + AG L+  EL+ L  A+  P +P  AIVGGSKVS
Sbjct:    2 SVIKMTDLDLAGKRVFIRADLNVPVKDG-KVTSDARIIASLPTIKHCLEAGAKVMVTSHLGRPTEGEYAEEFSLQPVVNYLNDALDCEVKLAKDYLDG------LELNAGELVVLENVRFNKGEKKNEEELSKKYAALCDVFVMDAFGTAHRAQASTHGVGMHAPVACAGPLLANELEALGKAMDKPARPMVAIVGGSKVS 195          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_VIBF1 (Phosphoglycerate kinase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=pgk PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 3.281e-41
Identity = 97/202 (48.02%), Postives = 136/202 (67.33%), Query Frame = 3
Query:   84 VSVLKEADLK--GKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG--VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            +SV+K  DL+  GKRVF+R DLNVP+ D   +T D R+ A++PTIK  +  GAKV+++SHLGRP       ++SL P+V  L++ L  +VK+A D +         E+  G +++LENVRF+K E+KN+ E +KK A+L D++V DAFG+AHRA AST GV      + AG L+  EL+ L  A+SNP++P  AIVGGSKVS
Sbjct:    1 MSVIKMTDLELAGKRVFIRADLNVPVKDG-KVTSDARILASLPTIKLCLEAGAKVMVTSHLGRPTEGEYNEEFSLAPVVNYLNDALDCDVKLAKDYLDG------LELNAGELVVLENVRFNKGEKKNEEELSKKYAALCDIFVMDAFGTAHRAQASTHGVGMNAPVACAGPLLAAELEALGKAMSNPERPLVAIVGGSKVS 195          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_PROMH (Phosphoglycerate kinase OS=Proteus mirabilis (strain HI4320) GN=pgk PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 3.281e-41
Identity = 94/201 (46.77%), Postives = 132/201 (65.67%), Query Frame = 3
Query:   81 SVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG--VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            SV  + + DL GKRV +R DLNVP+ D   +T D R+RA++PTI+  +  GAKV+++SHLGRP       ++SLKP+V  L E L   V +A D +         ++  G +++LENVRF+K E+K+D   +K+ A+L D++V DAFG+AHRA AST GVAKF   + AG L+  EL+ L  A+  P++P  AIVGGSKVS
Sbjct:    2 SVIKMTDLDLAGKRVLIRADLNVPVKDG-KVTSDARIRASLPTIEAALKQGAKVMVTSHLGRPTEGEYNEEFSLKPVVDYLKEKLSAPVSLAKDYLNG------VDVNAGELVVLENVRFNKGEKKDDETLSKQYAALCDVFVMDAFGTAHRAQASTHGVAKFADIACAGPLLSAELEALGKALDKPERPMVAIVGGSKVS 195          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_ACTSZ (Phosphoglycerate kinase OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=pgk PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 3.281e-41
Identity = 95/202 (47.03%), Postives = 133/202 (65.84%), Query Frame = 3
Query:   81 SVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG--VTPKYSLKPLVPRLSEL-LGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            SV  + + DL GKRVF+R DLNVP+ D   +  D R+RA +PT+K  +  GAKV+++SHLGRP      P+ SL+P+V  L+   LGV V++  + +         ++  G +++LENVR +K E+KNDPE  KK A+L D++V DAFG+AHRA AST GVA++   + AG L+  ELD L  A+  P++P  AIVGGSKVS
Sbjct:    2 SVIKMTDLDLAGKRVFIRADLNVPVKDG-KVASDARIRATIPTLKLALEKGAKVMVTSHLGRPTEGEFKPEDSLQPVVDYLNNAELGVPVRLVQNYLDG------VDVQAGEIVVLENVRVNKGEKKNDPELGKKYAALCDVFVMDAFGTAHRAQASTYGVAEYAPVACAGPLLAAELDALGKALKEPQRPMLAIVGGSKVS 196          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_ACIAD (Phosphoglycerate kinase OS=Acinetobacter sp. (strain ADP1) GN=pgk PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 4.286e-41
Identity = 99/197 (50.25%), Postives = 128/197 (64.97%), Query Frame = 3
Query:   93 LKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGVTPK--YSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            + + DL  KRV +R DLNVP+  N  IT D R+RAA+PTI+  +  GA V++ SHLGRP    PK   SL P+   LS+ LG EVK+  D +         EI  G V+LLENVRF+  E+KN+ E A+K A+L D++V DAFG+AHRA ASTEG A++ K + AG L+  ELD L  A+  P+KP  AIV GSKVS
Sbjct:    6 MTDLDLSEKRVLIREDLNVPVK-NGQITSDARLRAALPTIQAALAQGAAVMVCSHLGRPVEGEPKPEQSLAPVAAYLSDALGQEVKLLTDYLEG------VEIAPGQVVLLENVRFNLGEKKNNAELAQKYAALCDVFVMDAFGTAHRAEASTEGAARYAKVAAAGPLLATELDALGRALQTPEKPMVAIVAGSKVS 195          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK1_TRYCO (Phosphoglycerate kinase, cytosolic OS=Trypanosoma congolense GN=C1PGK PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 4.286e-41
Identity = 99/222 (44.59%), Postives = 136/222 (61.26%), Query Frame = 3
Query:   75 KKSVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGVT-------------PKY----SLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEE----EKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            KKS++   E DLKGK+  VRVD NVP+   + IT+D R+R+A+PTI+ ++  G   IL SHLGRPKG++             P Y    +L+P+  RL ELL   V  A DC+  +   +V ++  G V+LLENVRF++EE    E+     AK LAS  D++V+DAFG+AHR  A+  G+ K L    AG+LM+KE+ Y    + NP +P  AIVGGSKVS
Sbjct:    6 KKSIN---ECDLKGKKTLVRVDFNVPVKGGV-ITNDYRIRSALPTIQKVLNEGGSCILMSHLGRPKGISISEAAAVRSAGKVPGYEEAATLRPVAQRLGELLSKPVVFAPDCL--DAADVVKKMSPGDVVLLENVRFYREEGSKKEEEREAMAKVLASYGDIFVSDAFGTAHRDSATMTGIPKVLGHGAAGYLMEKEISYFSKVLGNPPRPLVAIVGGSKVS 221          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_SHISS (Phosphoglycerate kinase OS=Shigella sonnei (strain Ss046) GN=pgk PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 5.597e-41
Identity = 93/201 (46.27%), Postives = 131/201 (65.17%), Query Frame = 3
Query:   81 SVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG--VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            SV  + + DL GKRVF+R DLNVP+ D   +T D R+RA++PTI+  +  GAKV+++SHLGRP       ++SL P+V  L + L   V++  D +         ++ EG +++LENVRF+K E+K+D   +KK A+L D++V DAFG+AHRA AST G+ KF   + AG L+  ELD L  A+  P +P  AIVGGSKVS
Sbjct:    2 SVIKMTDLDLAGKRVFIRADLNVPVKDG-KVTSDARIRASLPTIELALKQGAKVMVTSHLGRPTEGEYNEEFSLLPVVNYLKDKLSNPVRLVKDYLDG------VDVAEGELVVLENVRFNKGEKKDDETLSKKYAALCDVFVMDAFGTAHRAQASTHGIGKFADVACAGPLLAAELDALGKALKEPARPMVAIVGGSKVS 195          
The following BLAST results are available for this feature:
BLAST of DN617596 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_YERPB3.281e-4147.76Phosphoglycerate kinase OS=Yersinia pseudotubercul... [more]
PGK_YERPA3.281e-4147.76Phosphoglycerate kinase OS=Yersinia pestis bv. Ant... [more]
PGK_YERP33.281e-4147.76Phosphoglycerate kinase OS=Yersinia pseudotubercul... [more]
PGK_VIBPA3.281e-4147.26Phosphoglycerate kinase OS=Vibrio parahaemolyticus... [more]
PGK_VIBF13.281e-4148.02Phosphoglycerate kinase OS=Vibrio fischeri (strain... [more]
PGK_PROMH3.281e-4146.77Phosphoglycerate kinase OS=Proteus mirabilis (stra... [more]
PGK_ACTSZ3.281e-4147.03Phosphoglycerate kinase OS=Actinobacillus succinog... [more]
PGK_ACIAD4.286e-4150.25Phosphoglycerate kinase OS=Acinetobacter sp. (stra... [more]
PGK1_TRYCO4.286e-4144.59Phosphoglycerate kinase, cytosolic OS=Trypanosoma ... [more]
PGK_SHISS5.597e-4146.27Phosphoglycerate kinase OS=Shigella sonnei (strain... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01G20_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001G20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617596 ID=DN617596; Name=DN617596; organism=Citrus sinensis; type=EST; length=679bp
CTCATTCCAAAATCTAACCAAAACCCTTTCTCGATTTCTCTGATCTCGTG
TTTGATCGAATCAAAATGGCCGCCAAGAAGAGTGTAAGCGTTCTAAAAGA
AGCTGATTTGAAGGGAAAGAGAGTGTTCGTACGAGTGGATCTGAACGTGC
CGTTGGATGACAACTTGAATATCACCGATGACAACAGAGTCCGTGCTGCT
GTTCCCACTATCAAATACCTGATGGGTCATGGCGCCAAAGTCATTCTCTC
CAGTCACTTGGGGCGTCCAAAGGGTGTTACACCCAAGTACAGCTTGAAAC
CTCTTGTGCCAAGGCTTTCTGAACTTCTTGGAGTTGAGGTTAAAATGGCA
AACGACTGCATTGGTGAAGAAGTTGAAAAAATGGTGGCTGAAATTCCCGA
AGGGGGCGTCTTGCTCCTCGAAAATGTGAGGTTCCATAAGGAGGAAGAGA
AGAATGACCCAGAGTTTGCTAAGAAGCTAGCTTCTCTTGCAGATCTCTAT
GTTAATGATGCATTCGGATCTGCCCATAGAGCCCATGCTTCCACTGAGGG
TGTGGCTAAGTTCTTGAAGCCTTCTGTGGCTGGTTTCCTTATGCAAAAGG
AACTAGATTATCTTGTTGGAGCTGTTTCAAATCCCAAGAAACCATTTGCT
GCCATTGTTGGTGGTTCAAAGGTGTCAAC
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