DN617596

Overview
NameDN617596
Unique NameDN617596
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length679
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_SHIFL (Phosphoglycerate kinase OS=Shigella flexneri GN=pgk PE=3 SV=2)

HSP 1 Score: 167.548 bits (423), Expect = 5.597e-41
Identity = 93/201 (46.27%), Postives = 131/201 (65.17%), Query Frame = 3 
Query:   81 SVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG--VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            SV  + + DL GKRVF+R DLNVP+ D   +T D R+RA++PTI+  +  GAKV+++SHLGRP       ++SL P+V  L + L   V++  D +         ++ EG +++LENVRF+K E+K+D   +KK A+L D++V DAFG+AHRA AST G+ KF   + AG L+  ELD L  A+  P +P  AIVGGSKVS
Sbjct:    2 SVIKMTDLDLAGKRVFIRADLNVPVKDG-KVTSDARIRASLPTIELALKQGAKVMVTSHLGRPTEGEYNEEFSLLPVVNYLKDKLSNPVRLVKDYLDG------VDVAEGELVVLENVRFNKGEKKDDETLSKKYAALCDVFVMDAFGTAHRAQASTHGIGKFADVACAGPLLAAELDALGKALKEPARPMVAIVGGSKVS 195
[Close]
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_SHIF8 (Phosphoglycerate kinase OS=Shigella flexneri serotype 5b (strain 8401) GN=pgk PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 5.597e-41
Identity = 93/201 (46.27%), Postives = 131/201 (65.17%), Query Frame = 3 
Query:   81 SVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG--VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            SV  + + DL GKRVF+R DLNVP+ D   +T D R+RA++PTI+  +  GAKV+++SHLGRP       ++SL P+V  L + L   V++  D +         ++ EG +++LENVRF+K E+K+D   +KK A+L D++V DAFG+AHRA AST G+ KF   + AG L+  ELD L  A+  P +P  AIVGGSKVS
Sbjct:    2 SVIKMTDLDLAGKRVFIRADLNVPVKDG-KVTSDARIRASLPTIELALKQGAKVMVTSHLGRPTEGEYNEEFSLLPVVNYLKDKLSNPVRLVKDYLDG------VDVAEGELVVLENVRFNKGEKKDDETLSKKYAALCDVFVMDAFGTAHRAQASTHGIGKFADVACAGPLLAAELDALGKALKEPARPMVAIVGGSKVS 195
[Close]
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_SHIDS (Phosphoglycerate kinase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=pgk PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 5.597e-41
Identity = 93/201 (46.27%), Postives = 131/201 (65.17%), Query Frame = 3 
Query:   81 SVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG--VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            SV  + + DL GKRVF+R DLNVP+ D   +T D R+RA++PTI+  +  GAKV+++SHLGRP       ++SL P+V  L + L   V++  D +         ++ EG +++LENVRF+K E+K+D   +KK A+L D++V DAFG+AHRA AST G+ KF   + AG L+  ELD L  A+  P +P  AIVGGSKVS
Sbjct:    2 SVIKMTDLDLAGKRVFIRADLNVPVKDG-KVTSDARIRASLPTIELALKQGAKVMVTSHLGRPTEGEYNEEFSLLPVVNYLKDKLSNPVRLVKDYLDG------VDVAEGELVVLENVRFNKGEKKDDETLSKKYAALCDVFVMDAFGTAHRAQASTHGIGKFADVACAGPLLAAELDALGKALKEPARPMVAIVGGSKVS 195
[Close]
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_SHIBS (Phosphoglycerate kinase OS=Shigella boydii serotype 4 (strain Sb227) GN=pgk PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 5.597e-41
Identity = 93/201 (46.27%), Postives = 131/201 (65.17%), Query Frame = 3 
Query:   81 SVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG--VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            SV  + + DL GKRVF+R DLNVP+ D   +T D R+RA++PTI+  +  GAKV+++SHLGRP       ++SL P+V  L + L   V++  D +         ++ EG +++LENVRF+K E+K+D   +KK A+L D++V DAFG+AHRA AST G+ KF   + AG L+  ELD L  A+  P +P  AIVGGSKVS
Sbjct:    2 SVIKMTDLDLAGKRVFIRADLNVPVKDG-KVTSDARIRASLPTIELALKQGAKVMVTSHLGRPTEGEYNEEFSLLPVVNYLKDKLSNPVRLVKDYLDG------VDVAEGELVVLENVRFNKGEKKDDETLSKKYAALCDVFVMDAFGTAHRAQASTHGIGKFADVACAGPLLAAELDALGKALKEPARPMVAIVGGSKVS 195
[Close]
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_PSEPF (Phosphoglycerate kinase OS=Pseudomonas fluorescens (strain Pf0-1) GN=pgk PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 5.597e-41
Identity = 96/201 (47.76%), Postives = 131/201 (65.17%), Query Frame = 3 
Query:   81 SVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG--VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            +V  + + DL+GKRV +R DLNVP+ D + +T D R+ A++PTIK  +  GA V++ SHLGRP     + + SLKP+   LS+ LG EV +  D +G        ++  G ++L ENVRF+K E+KN  E A++ A+L D++V DAFG+AHRA  ST GVAKF K + AG L+  ELD L  A+  P KP AAIV GSKVS
Sbjct:    2 TVLKMSDLDLQGKRVLIREDLNVPVKDGV-VTSDARILASLPTIKLALEKGAAVMVCSHLGRPTEGEFSAENSLKPVADYLSKALGREVPLVADYLGG------VDVKAGDIVLFENVRFNKGEKKNADELAQQYAALCDVFVMDAFGTAHRAEGSTHGVAKFAKVAAAGPLLAAELDALGKALGAPAKPMAAIVAGSKVS 195
[Close]
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_PSEE4 (Phosphoglycerate kinase OS=Pseudomonas entomophila (strain L48) GN=pgk PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 5.597e-41
Identity = 100/202 (49.50%), Postives = 132/202 (65.35%), Query Frame = 3 
Query:   84 VSVLK--EADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG--VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            ++VLK  + DL+GKRV +R DLNVP+ D + +T D R+ AA+PTIK  +  GA V++ SHLGRP     + + SLKP+   LS+ LG EV +  D +         E+  G ++L ENVRF+K E+KN  E A+K A+L D++V DAFG+AHRA  ST GVAKF K + AG L+  ELD L  A+  P KP AAIV GSKVS
Sbjct:    1 MTVLKMTDLDLQGKRVLIREDLNVPVKDGV-VTSDARILAALPTIKLALEKGAAVMVCSHLGRPTEGEFSEENSLKPVAAYLSKALGREVPLVADYLDG------VEVKAGDLVLFENVRFNKGEKKNADELAQKYAALCDVFVMDAFGTAHRAEGSTHGVAKFAKVATAGPLLAAELDALGKALKAPAKPMAAIVAGSKVS 195
[Close]
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_PSEAE (Phosphoglycerate kinase OS=Pseudomonas aeruginosa GN=pgk PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 5.597e-41
Identity = 98/202 (48.51%), Postives = 132/202 (65.35%), Query Frame = 3 
Query:   84 VSVLK--EADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG--VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            ++VLK  + DLKGKRV +R DLNVP+ D   +  D R++AA+PT+K  +  GA V++ SHLGRP     + + SLKP+   LS+ LG EV +  D +         E+  G ++L ENVRF+K E+KN  E A+K A+L D++V DAFG+AHRA  ST GVA+F K + AG L+  ELD L  A+ NP +P AAIV GSKVS
Sbjct:    1 MTVLKMTDLDLKGKRVLIREDLNVPVKDG-QVQSDARIKAALPTLKLALEKGAAVMVCSHLGRPTEGEFSAENSLKPVAEYLSKALGREVPLLADYLDG------VEVKAGDLVLFENVRFNKGEKKNADELAQKYAALCDVFVMDAFGTAHRAEGSTHGVARFAKVAAAGPLLAAELDALGKALGNPARPMAAIVAGSKVS 195
[Close]
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_PSEAB (Phosphoglycerate kinase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=pgk PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 5.597e-41
Identity = 98/202 (48.51%), Postives = 132/202 (65.35%), Query Frame = 3 
Query:   84 VSVLK--EADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG--VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            ++VLK  + DLKGKRV +R DLNVP+ D   +  D R++AA+PT+K  +  GA V++ SHLGRP     + + SLKP+   LS+ LG EV +  D +         E+  G ++L ENVRF+K E+KN  E A+K A+L D++V DAFG+AHRA  ST GVA+F K + AG L+  ELD L  A+ NP +P AAIV GSKVS
Sbjct:    1 MTVLKMTDLDLKGKRVLIREDLNVPVKDG-QVQSDARIKAALPTLKLALEKGAAVMVCSHLGRPTEGEFSAENSLKPVAEYLSKALGREVPLLADYLDG------VEVKAGDLVLFENVRFNKGEKKNADELAQKYAALCDVFVMDAFGTAHRAEGSTHGVARFAKVAAAGPLLAAELDALGKALGNPARPMAAIVAGSKVS 195
[Close]
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_PSEA8 (Phosphoglycerate kinase OS=Pseudomonas aeruginosa (strain LESB58) GN=pgk PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 5.597e-41
Identity = 98/202 (48.51%), Postives = 132/202 (65.35%), Query Frame = 3 
Query:   84 VSVLK--EADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG--VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            ++VLK  + DLKGKRV +R DLNVP+ D   +  D R++AA+PT+K  +  GA V++ SHLGRP     + + SLKP+   LS+ LG EV +  D +         E+  G ++L ENVRF+K E+KN  E A+K A+L D++V DAFG+AHRA  ST GVA+F K + AG L+  ELD L  A+ NP +P AAIV GSKVS
Sbjct:    1 MTVLKMTDLDLKGKRVLIREDLNVPVKDG-QVQSDARIKAALPTLKLALEKGAAVMVCSHLGRPTEGEFSAENSLKPVAEYLSKALGREVPLLADYLDG------VEVKAGDLVLFENVRFNKGEKKNADELAQKYAALCDVFVMDAFGTAHRAEGSTHGVARFAKVAAAGPLLAAELDALGKALDNPARPMAAIVAGSKVS 195
[Close]
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_PSEA7 (Phosphoglycerate kinase OS=Pseudomonas aeruginosa (strain PA7) GN=pgk PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 5.597e-41
Identity = 98/202 (48.51%), Postives = 132/202 (65.35%), Query Frame = 3 
Query:   84 VSVLK--EADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG--VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            ++VLK  + DLKGKRV +R DLNVP+ D   +  D R++AA+PTI+  +  GA V++ SHLGRP     + + SLKP+   LS+ LG EV +  D +         E+  G ++L ENVRF+K E+KN  E A+K A+L D++V DAFG+AHRA  ST GVA+F K + AG L+  ELD L  A+ NP +P AAIV GSKVS
Sbjct:    1 MTVLKMTDLDLKGKRVLIREDLNVPVKDG-QVQSDARIKAALPTIRLALEKGAAVMVCSHLGRPSEGEFSAENSLKPVAEYLSKALGREVPLLADYLDG------VEVKAGDLVLFENVRFNKGEKKNADELAQKYAALCDVFVMDAFGTAHRAEGSTHGVARFAKVAAAGPLLAAELDALGKALGNPARPMAAIVAGSKVS 195
The following BLAST results are available for this feature:
BLAST of DN617596 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_SHIFL5.597e-4146.27Phosphoglycerate kinase OS=Shigella flexneri GN=pg... [more]
PGK_SHIF85.597e-4146.27Phosphoglycerate kinase OS=Shigella flexneri serot... [more]
PGK_SHIDS5.597e-4146.27Phosphoglycerate kinase OS=Shigella dysenteriae se... [more]
PGK_SHIBS5.597e-4146.27Phosphoglycerate kinase OS=Shigella boydii serotyp... [more]
PGK_PSEPF5.597e-4147.76Phosphoglycerate kinase OS=Pseudomonas fluorescens... [more]
PGK_PSEE45.597e-4149.50Phosphoglycerate kinase OS=Pseudomonas entomophila... [more]
PGK_PSEAE5.597e-4148.51Phosphoglycerate kinase OS=Pseudomonas aeruginosa ... [more]
PGK_PSEAB5.597e-4148.51Phosphoglycerate kinase OS=Pseudomonas aeruginosa ... [more]
PGK_PSEA85.597e-4148.51Phosphoglycerate kinase OS=Pseudomonas aeruginosa ... [more]
PGK_PSEA75.597e-4148.51Phosphoglycerate kinase OS=Pseudomonas aeruginosa ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01G20_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001G20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617596 ID=DN617596; Name=DN617596; organism=Citrus sinensis; type=EST; length=679bp
CTCATTCCAAAATCTAACCAAAACCCTTTCTCGATTTCTCTGATCTCGTG
TTTGATCGAATCAAAATGGCCGCCAAGAAGAGTGTAAGCGTTCTAAAAGA
AGCTGATTTGAAGGGAAAGAGAGTGTTCGTACGAGTGGATCTGAACGTGC
CGTTGGATGACAACTTGAATATCACCGATGACAACAGAGTCCGTGCTGCT
GTTCCCACTATCAAATACCTGATGGGTCATGGCGCCAAAGTCATTCTCTC
CAGTCACTTGGGGCGTCCAAAGGGTGTTACACCCAAGTACAGCTTGAAAC
CTCTTGTGCCAAGGCTTTCTGAACTTCTTGGAGTTGAGGTTAAAATGGCA
AACGACTGCATTGGTGAAGAAGTTGAAAAAATGGTGGCTGAAATTCCCGA
AGGGGGCGTCTTGCTCCTCGAAAATGTGAGGTTCCATAAGGAGGAAGAGA
AGAATGACCCAGAGTTTGCTAAGAAGCTAGCTTCTCTTGCAGATCTCTAT
GTTAATGATGCATTCGGATCTGCCCATAGAGCCCATGCTTCCACTGAGGG
TGTGGCTAAGTTCTTGAAGCCTTCTGTGGCTGGTTTCCTTATGCAAAAGG
AACTAGATTATCTTGTTGGAGCTGTTTCAAATCCCAAGAAACCATTTGCT
GCCATTGTTGGTGGTTCAAAGGTGTCAAC
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