DN617596

Overview
NameDN617596
Unique NameDN617596
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length679
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_ANASK (Phosphoglycerate kinase OS=Anaeromyxobacter sp. (strain K) GN=pgk PE=3 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 1.674e-61
Identity = 118/194 (60.82%), Postives = 154/194 (79.38%), Query Frame = 3
Query:  105 DLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGVTP---KYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            DL GKRVF+RVD NVPLD    +TDD R+RAA+PTI++ +   AKVIL+SHLGRPKG      K +L+P   RLSELL  +V +A+DC+G+ V+K+V ++ +G VLLLEN+RFH EEEKND  FA++LASLAD++VNDAFG+AHRAHAST G+A+F+K   AGFL+QKE++YL  A+ +P +PF AIVGG+KVS
Sbjct:   10 DLAGKRVFIRVDFNVPLDPQGRVTDDARIRAALPTIRHAIQAKAKVILASHLGRPKGKPDDRQKLTLEPAAVRLSELLSQDVILADDCVGDGVKKLVRDLKDGHVLLLENLRFHPEEEKNDEAFARELASLADVWVNDAFGTAHRAHASTAGMARFVKEKAAGFLVQKEVEYLGKALGSPARPFVAIVGGAKVS 203          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_THEP1 (Phosphoglycerate kinase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=pgk PE=3 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 4.870e-61
Identity = 120/196 (61.22%), Postives = 151/196 (77.04%), Query Frame = 3
Query:   93 LKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGV-TPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            +K+ DLKGKRV +RVD NVP+ D + + DD R+RAA+PTIKY +  GAKVIL SHLGRPKG  +P++SL P+  RLSELLG EVK     +G+EV+K V E+ EG VLLLEN RFH  E KNDPE AK  ASLAD++VNDAFG+AHRAHAS  G+A+F+ PSVAGFLM+KE+ +L     NP+KP+  ++GG+KVS
Sbjct:    6 IKDVDLKGKRVIMRVDFNVPVKDGV-VQDDTRIRAALPTIKYALEQGAKVILLSHLGRPKGEPSPEFSLAPVAKRLSELLGKEVKFVPAVVGDEVKKAVEELKEGEVLLLENTRFHPGETKNDPELAKFWASLADIHVNDAFGTAHRAHASNVGIAQFI-PSVAGFLMEKEIKFLSKVTYNPEKPYVVVLGGAKVS 199          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_MOOTA (Phosphoglycerate kinase OS=Moorella thermoacetica (strain ATCC 39073) GN=pgk PE=3 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 4.870e-61
Identity = 120/196 (61.22%), Postives = 152/196 (77.55%), Query Frame = 3
Query:   93 LKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            LK+ +L  KRV VRVD NVPL+    +TD+ R+RAA+PTI+YL+ HGA+VIL SHLGRPKG V  +  L P+   L  LLG +V   NDC+G EVE   A +  G VLLLEN+RFH EEEKNDP FA++LASLAD+YVNDAFG+AHRAHASTEGVA +L P+ AGFL+QKE++ L  A+++P++PF AI+GG+KVS
Sbjct:    6 LKDLELNNKRVLVRVDFNVPLEAG-RVTDNTRIRAALPTIEYLLDHGARVILMSHLGRPKGKVKEELRLDPVARELESLLGRQVHKVNDCVGPEVEAAAAALKPGEVLLLENLRFHPEEEKNDPGFARQLASLADVYVNDAFGAAHRAHASTEGVAHYL-PAAAGFLLQKEIETLGKALADPERPFVAIIGGAKVS 199          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_BACME (Phosphoglycerate kinase OS=Bacillus megaterium GN=pgk PE=3 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 4.870e-61
Identity = 121/195 (62.05%), Postives = 152/195 (77.95%), Query Frame = 3
Query:   93 LKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKV 674
            LK+ D+KGKRVF RVD NVP+ D   +TD+ R+RAA+PTI+YL+  GAKVIL+SHLGRPKG V  +  L  +  RL  LLG +V  A++  GEEV+K +  + EG VL+LENVRF+  EEKNDPE AK  A LAD+YVNDAFG+AHRAHASTEG+A+ + P+VAGFLM+KELD L  A+SNP++PF AIVGG+KV
Sbjct:    6 LKDIDVKGKRVFCRVDFNVPMKDG-KVTDETRIRAAIPTIQYLVEQGAKVILASHLGRPKGEVVEELRLNAVAERLQALLGKDVAKADEAFGEEVKKTIDGMSEGDVLVLENVRFYPGEEKNDPELAKAFAELADVYVNDAFGAAHRAHASTEGIAQHI-PAVAGFLMEKELDVLSKALSNPERPFTAIVGGAKV 198          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_ANAD2 (Phosphoglycerate kinase OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=pgk PE=3 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 4.870e-61
Identity = 117/194 (60.31%), Postives = 154/194 (79.38%), Query Frame = 3
Query:  105 DLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGVTP---KYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            +L GKRVF+RVD NVPLD    +TDD R+RAA+PTI++ +   AKVIL+SHLGRPKG      K +L+P   RLSELL  +V +A+DC+G+ V+K+V ++ +G VLLLEN+RFH EEEKND  FA++LASLAD++VNDAFG+AHRAHAST G+A+F+K   AGFL+QKE++YL  A+ +P +PF AIVGG+KVS
Sbjct:   10 ELAGKRVFIRVDFNVPLDPQGRVTDDARIRAALPTIRHAIQAKAKVILASHLGRPKGKPEDRQKLTLEPAAVRLSELLSQDVILADDCVGDGVKKLVRDLKDGHVLLLENLRFHPEEEKNDEAFARELASLADVWVNDAFGTAHRAHASTAGMARFVKEKAAGFLVQKEVEYLGKALGSPARPFVAIVGGAKVS 203          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_BACSU (Phosphoglycerate kinase OS=Bacillus subtilis GN=pgk PE=1 SV=3)

HSP 1 Score: 233.802 bits (595), Expect = 6.360e-61
Identity = 121/195 (62.05%), Postives = 151/195 (77.44%), Query Frame = 3
Query:   93 LKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKV 674
            LK+ D+KGK VF RVD NVP+ D   +TDD R+RAA+PTIK+L   GAKV+L+SHLGRPKG V  +  L P+  RL ELLG EVK A++  G+ V+  ++E+ +G VL+LENVRF+  EEKNDPE AK  A LAD+YVNDAFG+AHRAHAST G+A+ L P+VAGFLM+KELD L  AVSNP +PF AI+GG+KV
Sbjct:    6 LKDIDVKGKVVFCRVDFNVPMKDG-EVTDDTRIRAALPTIKHLADQGAKVLLASHLGRPKGEVVEELRLTPVAARLGELLGKEVKKADEAYGDAVKAQISEMKDGDVLVLENVRFYPGEEKNDPELAKAFAELADVYVNDAFGAAHRAHASTAGIAEHL-PAVAGFLMEKELDVLGKAVSNPDRPFTAIIGGAKV 198          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_SYNJB (Phosphoglycerate kinase OS=Synechococcus sp. GN=pgk PE=3 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 8.306e-61
Identity = 122/201 (60.70%), Postives = 147/201 (73.13%), Query Frame = 3
Query:  105 DLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRP----------KGVTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            DL GKRV VR D NVPLD   NITDD R+RAA+PT++ L   GAKVIL+SHLGRP          K      SL P+  RLS+LLG  V  A DCIG E E +V  +  G V LLENVRF+ EEE NDPEFA+KLASLADL+VNDAFGSAHRAHAST GV  +L+P+VAG+L+++EL +L GA+ +P++P AAI+GGSKVS
Sbjct:   15 DLAGKRVLVRADFNVPLDAQGNITDDTRIRAALPTVQALTQAGAKVILTSHLGRPVKKDKETGAVKVAREGNSLAPVATRLSQLLGQPVAFAPDCIGPEAEAVVNRLENGQVALLENVRFYPEEEDNDPEFARKLASLADLFVNDAFGSAHRAHASTAGVTAYLQPAVAGYLVERELQFLSGAIEDPRRPLAAIIGGSKVS 215          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_PROMT (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain NATL2A) GN=pgk PE=3 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 8.306e-61
Identity = 126/203 (62.07%), Postives = 146/203 (71.92%), Query Frame = 3
Query:   72 AKKSVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            +K+S+S L   DL GKRV VRVD NVPL D   ITDD R+RAA+PTI  L+   A+VILS+H GRPKG V     L  +  RLSELLG  V     CIG E +  V  +  G V+LLENVRF   EEKND EFAK+LASLA++YVNDAFG+AHRAHASTEGV KFL P VAG+LM+KEL YL GA+  P+ P AAIVGGSKVS
Sbjct:    2 SKRSLSSLGAEDLCGKRVLVRVDFNVPLGDEGLITDDTRIRAALPTINDLLDKSARVILSAHFGRPKGQVNETMRLTAVAQRLSELLGKTVVKTESCIGAEAKSKVDAMSNGDVVLLENVRFISGEEKNDTEFAKELASLAEVYVNDAFGAAHRAHASTEGVTKFLSPCVAGYLMEKELKYLQGAIDQPQSPLAAIVGGSKVS 204          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_PELTS (Phosphoglycerate kinase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=pgk PE=3 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.085e-60
Identity = 122/203 (60.10%), Postives = 158/203 (77.83%), Query Frame = 3
Query:   72 AKKSVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            AKK+V   ++ D+KGKRV +RVD NVP++ N  + DD +++ AVPTI YL+G  A+VIL SHLGRPKG V  +Y + P+  RLSELLG  V  A DC+GE     VA++ +G V+LLENVRFH EEEKND +FA++LA LAD++VNDAFG+AHRAHASTEGVA FL P+VAG LM+KEL+ L   +++P++PFAA+VGGSKVS
Sbjct:    2 AKKTV---RDIDVKGKRVLLRVDFNVPME-NGRVADDVKIKEAVPTINYLIGQKARVILVSHLGRPKGRVDERYKMDPVARRLSELLGKTVVKAGDCVGEAARSAVAQMQDGDVVLLENVRFHPEEEKNDEKFARQLAELADVFVNDAFGTAHRAHASTEGVAGFL-PAVAGLLMEKELEILGRLLTSPERPFAAVVGGSKVS 199          
BLAST of DN617596 vs. ExPASy Swiss-Prot
Match: PGK_ACIC5 (Phosphoglycerate kinase OS=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) GN=pgk PE=3 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.085e-60
Identity = 119/203 (58.62%), Postives = 151/203 (74.38%), Query Frame = 3
Query:   93 LKEADLKGKRVFVRVDLNVPL-DDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG-VTPKYSLKPLVPRLSELLG------VEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVS 677
            +++ DL  K VF+RVD NVPL +D   ITDD R+R  +PTI+Y + H AK+IL+SHLGRPKG V PKYSL+P+V RL  LL       V V  + DC+G+  +++  ++  G VLLLEN+RFH EEE NDPEFA+KLASL ++YVNDAFGSAHRAHASTEG+  F+K S AG LM+KEL+YL  A+  P KPF AI+GG+KVS
Sbjct:    6 IRDLDLAHKHVFMRVDFNVPLSEDGSEITDDTRIRETLPTIEYALRHKAKLILASHLGRPKGKVNPKYSLRPVVDRLRTLLDHDVTSRVNVAFSPDCVGDVAKELSLQLESGQVLLLENLRFHAEEEANDPEFARKLASLCEIYVNDAFGSAHRAHASTEGITHFVKQSAAGLLMEKELEYLGKALEAPAKPFVAIIGGAKVS 208          
The following BLAST results are available for this feature:
BLAST of DN617596 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_ANASK1.674e-6160.82Phosphoglycerate kinase OS=Anaeromyxobacter sp. (s... [more]
PGK_THEP14.870e-6161.22Phosphoglycerate kinase OS=Thermotoga petrophila (... [more]
PGK_MOOTA4.870e-6161.22Phosphoglycerate kinase OS=Moorella thermoacetica ... [more]
PGK_BACME4.870e-6162.05Phosphoglycerate kinase OS=Bacillus megaterium GN=... [more]
PGK_ANAD24.870e-6160.31Phosphoglycerate kinase OS=Anaeromyxobacter dehalo... [more]
PGK_BACSU6.360e-6162.05Phosphoglycerate kinase OS=Bacillus subtilis GN=pg... [more]
PGK_SYNJB8.306e-6160.70Phosphoglycerate kinase OS=Synechococcus sp. GN=pg... [more]
PGK_PROMT8.306e-6162.07Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_PELTS1.085e-6060.10Phosphoglycerate kinase OS=Pelotomaculum thermopro... [more]
PGK_ACIC51.085e-6058.62Phosphoglycerate kinase OS=Acidobacterium capsulat... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS11_01G20_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001G20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617596 ID=DN617596; Name=DN617596; organism=Citrus sinensis; type=EST; length=679bp
CTCATTCCAAAATCTAACCAAAACCCTTTCTCGATTTCTCTGATCTCGTG
TTTGATCGAATCAAAATGGCCGCCAAGAAGAGTGTAAGCGTTCTAAAAGA
AGCTGATTTGAAGGGAAAGAGAGTGTTCGTACGAGTGGATCTGAACGTGC
CGTTGGATGACAACTTGAATATCACCGATGACAACAGAGTCCGTGCTGCT
GTTCCCACTATCAAATACCTGATGGGTCATGGCGCCAAAGTCATTCTCTC
CAGTCACTTGGGGCGTCCAAAGGGTGTTACACCCAAGTACAGCTTGAAAC
CTCTTGTGCCAAGGCTTTCTGAACTTCTTGGAGTTGAGGTTAAAATGGCA
AACGACTGCATTGGTGAAGAAGTTGAAAAAATGGTGGCTGAAATTCCCGA
AGGGGGCGTCTTGCTCCTCGAAAATGTGAGGTTCCATAAGGAGGAAGAGA
AGAATGACCCAGAGTTTGCTAAGAAGCTAGCTTCTCTTGCAGATCTCTAT
GTTAATGATGCATTCGGATCTGCCCATAGAGCCCATGCTTCCACTGAGGG
TGTGGCTAAGTTCTTGAAGCCTTCTGTGGCTGGTTTCCTTATGCAAAAGG
AACTAGATTATCTTGTTGGAGCTGTTTCAAATCCCAAGAAACCATTTGCT
GCCATTGTTGGTGGTTCAAAGGTGTCAAC
back to top