DN617595

Overview
NameDN617595
Unique NameDN617595
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length581
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2633 contig Csv1_Contig2633:27..607. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617595 vs. ExPASy Swiss-Prot
Match: PGK_THEEB (Phosphoglycerate kinase OS=Thermosynechococcus elongatus (strain BP-1) GN=pgk PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 3.620e-37
Identity = 76/94 (80.85%), Postives = 84/94 (89.36%), Query Frame = -1
Query:  297 FSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 578
            F EAL   KT+IWNGPMGVFEFD+FA GTEAIA+ LAEL+ +GV TIIGGGDSVAAVEKVG+AD+MSHISTGGGASLELLEGK LPG+ ALDDA
Sbjct:  307 FQEALQDCKTVIWNGPMGVFEFDQFAKGTEAIARYLAELTSQGVCTIIGGGDSVAAVEKVGVADRMSHISTGGGASLELLEGKQLPGIAALDDA 400          
BLAST of DN617595 vs. ExPASy Swiss-Prot
Match: PGK_ANASP (Phosphoglycerate kinase OS=Anabaena sp. (strain PCC 7120) GN=pgk PE=1 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 4.728e-37
Identity = 77/94 (81.91%), Postives = 82/94 (87.23%), Query Frame = -1
Query:  297 FSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 578
            F  AL  TKT+IWNGPMGVFEFDKFAAGTEAIA  LAE+   G TTIIGGGDSVAAVEKVGLAD+MSHISTGGGASLELLEGK LPG+ ALD+A
Sbjct:  307 FQAALADTKTVIWNGPMGVFEFDKFAAGTEAIAHTLAEIGKTGTTTIIGGGDSVAAVEKVGLADQMSHISTGGGASLELLEGKVLPGIAALDEA 400          
BLAST of DN617595 vs. ExPASy Swiss-Prot
Match: PGK_PROMM (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain MIT 9313) GN=pgk PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 6.175e-37
Identity = 77/94 (81.91%), Postives = 82/94 (87.23%), Query Frame = -1
Query:  297 FSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 578
            F +AL   +T+IWNGPMGVFEFDKFAAGT AIA  LA+LSGKG  TIIGGGDSVAAVEK GLA+KMSHISTGGGASLELLEGK LPGV ALDDA
Sbjct:  308 FQDALADCQTVIWNGPMGVFEFDKFAAGTNAIATTLADLSGKGCCTIIGGGDSVAAVEKAGLAEKMSHISTGGGASLELLEGKVLPGVAALDDA 401          
BLAST of DN617595 vs. ExPASy Swiss-Prot
Match: PGK_PROM3 (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain MIT 9303) GN=pgk PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 6.175e-37
Identity = 77/94 (81.91%), Postives = 82/94 (87.23%), Query Frame = -1
Query:  297 FSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 578
            F +AL   +T+IWNGPMGVFEFDKFAAGT AIA  LA+LSGKG  TIIGGGDSVAAVEK GLA+KMSHISTGGGASLELLEGK LPGV ALDDA
Sbjct:  308 FQDALADCQTVIWNGPMGVFEFDKFAAGTNAIATTLADLSGKGCCTIIGGGDSVAAVEKAGLAEKMSHISTGGGASLELLEGKVLPGVAALDDA 401          
BLAST of DN617595 vs. ExPASy Swiss-Prot
Match: PGK_SYNPX (Phosphoglycerate kinase OS=Synechococcus sp. (strain WH8102) GN=pgk PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 2.347e-36
Identity = 76/94 (80.85%), Postives = 81/94 (86.17%), Query Frame = -1
Query:  297 FSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 578
            F +AL   +T+IWNGPMGVFEF+KFA GT AIA  LAELSGKG  TIIGGGDSVAAVEK GLADKMSHISTGGGASLELLEGK LPGV AL+DA
Sbjct:  308 FQDALGDCQTVIWNGPMGVFEFEKFATGTNAIATTLAELSGKGCCTIIGGGDSVAAVEKAGLADKMSHISTGGGASLELLEGKVLPGVAALNDA 401          
BLAST of DN617595 vs. ExPASy Swiss-Prot
Match: PGK_CYAP7 (Phosphoglycerate kinase OS=Cyanothece sp. (strain PCC 7424) GN=pgk PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 2.347e-36
Identity = 75/94 (79.79%), Postives = 82/94 (87.23%), Query Frame = -1
Query:  297 FSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 578
            F +AL   K++IWNGPMGVFEFDKFA GTEAIA  L  L+GKG TTIIGGGDSVAAVEKVG+ADKMSHISTGGGASLELLEGK LPG+ ALD+A
Sbjct:  308 FQDALADCKSVIWNGPMGVFEFDKFAKGTEAIAYTLETLTGKGATTIIGGGDSVAAVEKVGVADKMSHISTGGGASLELLEGKVLPGIAALDEA 401          
BLAST of DN617595 vs. ExPASy Swiss-Prot
Match: PGK_MICAN (Phosphoglycerate kinase OS=Microcystis aeruginosa (strain NIES-843) GN=pgk PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 3.065e-36
Identity = 73/94 (77.66%), Postives = 83/94 (88.30%), Query Frame = -1
Query:  297 FSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 578
            F EAL   K+++WNGPMGVFEFDKFAAGT+AIA  LA+L+  G TTIIGGGDSVAAVEKVG+A+KMSHISTGGGASLELLEGK LPG+ ALD+A
Sbjct:  309 FQEALSNCKSVLWNGPMGVFEFDKFAAGTDAIAHTLADLTATGTTTIIGGGDSVAAVEKVGVAEKMSHISTGGGASLELLEGKVLPGIAALDEA 402          
BLAST of DN617595 vs. ExPASy Swiss-Prot
Match: PGK_CYAP8 (Phosphoglycerate kinase OS=Cyanothece sp. (strain PCC 8801) GN=pgk PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 3.065e-36
Identity = 75/93 (80.65%), Postives = 81/93 (87.10%), Query Frame = -1
Query:  300 FSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 578
            F  AL   K++IWNGPMGVFEFDKFA GTEAIA  LAEL+GKG  TIIGGGDSVAAVEKVG+ADKMSHISTGGGASLELLEGK LPG+ ALD+
Sbjct:  307 FQAALADCKSVIWNGPMGVFEFDKFAKGTEAIAHTLAELTGKGTITIIGGGDSVAAVEKVGVADKMSHISTGGGASLELLEGKVLPGIAALDE 399          
BLAST of DN617595 vs. ExPASy Swiss-Prot
Match: PGK_SYNS9 (Phosphoglycerate kinase OS=Synechococcus sp. (strain CC9902) GN=pgk PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 4.003e-36
Identity = 76/94 (80.85%), Postives = 80/94 (85.11%), Query Frame = -1
Query:  297 FSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 578
            F  AL   KT+IWNGPMGVFEFDKFAAGT AIA  LAE+ GKG  TIIGGGDSVAAVEK GLA+KMSHISTGGGASLELLEGK LPGV ALD+A
Sbjct:  308 FQAALADCKTVIWNGPMGVFEFDKFAAGTNAIATTLAEIGGKGCCTIIGGGDSVAAVEKAGLAEKMSHISTGGGASLELLEGKVLPGVAALDNA 401          
BLAST of DN617595 vs. ExPASy Swiss-Prot
Match: PGK_SYNP2 (Phosphoglycerate kinase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=pgk PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 6.827e-36
Identity = 76/94 (80.85%), Postives = 80/94 (85.11%), Query Frame = -1
Query:  297 FSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 578
            F EALD   T IWNGPMGVFEFDKFA GTEAIAK LA  +  G  TIIGGGDSVAAVEKVG+ADKMSHISTGGGASLELLEGK LPG++ALDDA
Sbjct:  305 FQEALDGCGTAIWNGPMGVFEFDKFAVGTEAIAKTLAGATETGTVTIIGGGDSVAAVEKVGVADKMSHISTGGGASLELLEGKELPGIVALDDA 398          
The following BLAST results are available for this feature:
BLAST of DN617595 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_THEEB3.620e-3780.85Phosphoglycerate kinase OS=Thermosynechococcus elo... [more]
PGK_ANASP4.728e-3781.91Phosphoglycerate kinase OS=Anabaena sp. (strain PC... [more]
PGK_PROMM6.175e-3781.91Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_PROM36.175e-3781.91Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_SYNPX2.347e-3680.85Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_CYAP72.347e-3679.79Phosphoglycerate kinase OS=Cyanothece sp. (strain ... [more]
PGK_MICAN3.065e-3677.66Phosphoglycerate kinase OS=Microcystis aeruginosa ... [more]
PGK_CYAP83.065e-3680.65Phosphoglycerate kinase OS=Cyanothece sp. (strain ... [more]
PGK_SYNS94.003e-3680.85Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]
PGK_SYNP26.827e-3680.85Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01G20_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001G20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617595 ID=DN617595; Name=DN617595; organism=Citrus sinensis; type=EST; length=581bp
GGATTCATGCATTATCTAACAATCATCAACGGCTCATTGTGATCAGAAAG
GAACAAGAACTTGACTTCAGGAAACTTATAGCCTTACCATCACAATGTTC
CAAAATGGGATCAAATCCAGAAAAATGCATCACCATTGATGCCTGTGAGA
AAGAATTTATTTTTACTCTTACAGCATCTACAAAACCAACTCTAATGATA
AAGTTTAACTTTTATCCACTCTGGGCTGACAACCAGCCACACATACAACT
CTGGAAATGGCACATTTAAAAAAGGAAAGTCCAGGAACTGGGTTTAAGCA
TCATCAAGAGCAAGCACACCAGGGAGTGTTTTGCCCTCAAGGAGCTCTAA
GCTGGCTCCACCTCCAGTGGAGATATGGCTCATCTTGTCAGCCAGACCAA
CCTTCTCTACGGCTGCAACTGAGTCACCTCCTCCAATGATTGTGGTCACT
CCCTTCCCGCTGAGCTCCGCAAGCTTCTTGGCAATTGCCTCAGTGCCAGC
AGCAAATTTATCAAATTCAAACACACCCATAGGTCCATTCCAGATGATGG
TTTTAGTAGTATCCAAAGCTTCACTGAATGA
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