DN617595

Overview
NameDN617595
Unique NameDN617595
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length581
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2633 contig Csv1_Contig2633:27..607. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617595 vs. ExPASy Swiss-Prot
Match: PGK_CHLAD (Phosphoglycerate kinase OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=pgk PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 5.063e-31
Identity = 63/94 (67.02%), Postives = 77/94 (81.91%), Query Frame = -1
Query:  297 FSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 578
            +S  + + +T+IWNGPMGVFE + FAAGT AIA+ +AE S  G  TI+GGGDSVAAVE+ GLA+KM+H+STGGGASLELLEG+ LPGV AL DA
Sbjct:  306 YSAEIRSARTVIWNGPMGVFELEPFAAGTRAIAQAMAEASANGAITIVGGGDSVAAVEQAGLAEKMAHVSTGGGASLELLEGRVLPGVAALQDA 399          
BLAST of DN617595 vs. ExPASy Swiss-Prot
Match: PGK_CHLSY (Phosphoglycerate kinase OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=pgk PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 6.613e-31
Identity = 63/94 (67.02%), Postives = 75/94 (79.79%), Query Frame = -1
Query:  297 FSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 578
            +S  +   +T+IWNGPMGVFE + FA GT AIA+ +AE +  G  TI+GGGDSVAAVE+ GLADKMSH+STGGGASLELLEG+ LPGV AL DA
Sbjct:  306 YSAEIRAARTVIWNGPMGVFELEPFAVGTRAIAQAMAEAAANGAITIVGGGDSVAAVEQAGLADKMSHVSTGGGASLELLEGRVLPGVAALQDA 399          
BLAST of DN617595 vs. ExPASy Swiss-Prot
Match: PGK_CHLAA (Phosphoglycerate kinase OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=pgk PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 6.613e-31
Identity = 63/94 (67.02%), Postives = 75/94 (79.79%), Query Frame = -1
Query:  297 FSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 578
            +S  +   +T+IWNGPMGVFE + FA GT AIA+ +AE +  G  TI+GGGDSVAAVE+ GLADKMSH+STGGGASLELLEG+ LPGV AL DA
Sbjct:  306 YSAEIRAARTVIWNGPMGVFELEPFAVGTRAIAQAMAEAAANGAITIVGGGDSVAAVEQAGLADKMSHVSTGGGASLELLEGRVLPGVAALQDA 399          
BLAST of DN617595 vs. ExPASy Swiss-Prot
Match: PGK_TRIEI (Phosphoglycerate kinase OS=Trichodesmium erythraeum (strain IMS101) GN=pgk PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.128e-30
Identity = 67/93 (72.04%), Postives = 78/93 (83.87%), Query Frame = -1
Query:  300 FSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 578
            F +AL   KT+IWNGPMGVFE +KFA GTEAIA+ LA+   +   TIIGGGDSVAAVE++GL +KMSHISTGGGASLELLEGK LPG++ALDD
Sbjct:  307 FQDALADCKTVIWNGPMGVFEMEKFAKGTEAIAQTLADK--QDAITIIGGGDSVAAVEQLGLGEKMSHISTGGGASLELLEGKKLPGIVALDD 397          
BLAST of DN617595 vs. ExPASy Swiss-Prot
Match: PGK_HERA2 (Phosphoglycerate kinase OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) GN=pgk PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.247e-29
Identity = 63/94 (67.02%), Postives = 78/94 (82.98%), Query Frame = -1
Query:  300 SFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 581
            ++S+ +   KT+IWNGPMGVFE + FAAGT A+A+ LA+ S     TIIGGGDSVAA+E++GLA+KMSHISTGGGASLELLEGK LPG+ AL+D
Sbjct:  303 TYSQVVSEAKTVIWNGPMGVFELEPFAAGTRAVAQALADSSA---ITIIGGGDSVAAIEQMGLAEKMSHISTGGGASLELLEGKVLPGIAALND 393          
BLAST of DN617595 vs. ExPASy Swiss-Prot
Match: PGKH_CHLRE (Phosphoglycerate kinase, chloroplastic OS=Chlamydomonas reinhardtii PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.629e-29
Identity = 64/94 (68.09%), Postives = 76/94 (80.85%), Query Frame = -1
Query:  300 SFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 581
            +F++AL   KT++WNGPMGVFEF +    T +IA  LA L+ KG  TIIGGGDSVAAVE+ G+A+KMSHISTGGGASLELLEGK LPGV ALD+
Sbjct:  367 TFNDALADAKTVVWNGPMGVFEFPQVRQRTVSIANTLAGLTPKGCITIIGGGDSVAAVEQAGVAEKMSHISTGGGASLELLEGKVLPGVAALDE 460          
BLAST of DN617595 vs. ExPASy Swiss-Prot
Match: PGK_PELPB (Phosphoglycerate kinase OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=pgk PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 3.629e-29
Identity = 59/87 (67.82%), Postives = 73/87 (83.91%), Query Frame = -1
Query:  300 TTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 560
            + +T++WNGPMGVFE D FAAGT A+A+ +AE + +G TTIIGGGDS AAV K GLA++M+HISTGGGASLE LEGK LPG+ AL+D
Sbjct:  311 SARTVLWNGPMGVFEIDNFAAGTMAVAQAMAEATAEGATTIIGGGDSAAAVAKAGLANEMTHISTGGGASLEFLEGKELPGIAALND 397          
BLAST of DN617595 vs. ExPASy Swiss-Prot
Match: PGK_PELLD (Phosphoglycerate kinase OS=Pelodictyon luteolum (strain DSM 273) GN=pgk PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 3.629e-29
Identity = 61/84 (72.62%), Postives = 69/84 (82.14%), Query Frame = -1
Query:  303 KTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 554
            KT++WNGPMGVFE D FA GT A+A+ LA  + KG TTIIGGGDS AAV K GLADKM+HISTGGGASLE LEGK LPG+ AL+
Sbjct:  313 KTVLWNGPMGVFEIDNFAGGTIAVAEALAAATAKGATTIIGGGDSAAAVAKAGLADKMTHISTGGGASLEFLEGKELPGIAALN 396          
BLAST of DN617595 vs. ExPASy Swiss-Prot
Match: PGK_PROVI (Phosphoglycerate kinase OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=pgk PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.072e-28
Identity = 60/85 (70.59%), Postives = 69/85 (81.18%), Query Frame = -1
Query:  300 KTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 554
            +TI+WNGPMGVFE D FA GT A+A+ +A  + KG TTIIGGGDS AAV K GLA KM+HISTGGGASLE LEGK LPG+ AL+D
Sbjct:  313 RTILWNGPMGVFEIDSFANGTFAVAEAMALATAKGATTIIGGGDSAAAVAKAGLASKMTHISTGGGASLEFLEGKELPGIAALND 397          
BLAST of DN617595 vs. ExPASy Swiss-Prot
Match: PGK_CHLTE (Phosphoglycerate kinase OS=Chlorobium tepidum GN=pgk PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.072e-28
Identity = 59/91 (64.84%), Postives = 74/91 (81.32%), Query Frame = -1
Query:  300 EALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 572
            E LD  KT++WNGPMGVFE D+FA GT A+A+ LA+ + +G  TIIGGGDS AA+ K GL+DK++H+STGGGASLE LEGK LPG+ AL+D
Sbjct:  308 EILDA-KTVLWNGPMGVFEIDQFARGTFAVAQALADATAEGAITIIGGGDSAAAIAKAGLSDKVTHVSTGGGASLEFLEGKELPGIAALND 397          
The following BLAST results are available for this feature:
BLAST of DN617595 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_CHLAD5.063e-3167.02Phosphoglycerate kinase OS=Chloroflexus aggregans ... [more]
PGK_CHLSY6.613e-3167.02Phosphoglycerate kinase OS=Chloroflexus aurantiacu... [more]
PGK_CHLAA6.613e-3167.02Phosphoglycerate kinase OS=Chloroflexus aurantiacu... [more]
PGK_TRIEI1.128e-3072.04Phosphoglycerate kinase OS=Trichodesmium erythraeu... [more]
PGK_HERA21.247e-2967.02Phosphoglycerate kinase OS=Herpetosiphon aurantiac... [more]
PGKH_CHLRE1.629e-2968.09Phosphoglycerate kinase, chloroplastic OS=Chlamydo... [more]
PGK_PELPB3.629e-2967.82Phosphoglycerate kinase OS=Pelodictyon phaeoclathr... [more]
PGK_PELLD3.629e-2972.62Phosphoglycerate kinase OS=Pelodictyon luteolum (s... [more]
PGK_PROVI3.072e-2870.59Phosphoglycerate kinase OS=Prosthecochloris vibrio... [more]
PGK_CHLTE3.072e-2864.84Phosphoglycerate kinase OS=Chlorobium tepidum GN=p... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01G20_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001G20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617595 ID=DN617595; Name=DN617595; organism=Citrus sinensis; type=EST; length=581bp
GGATTCATGCATTATCTAACAATCATCAACGGCTCATTGTGATCAGAAAG
GAACAAGAACTTGACTTCAGGAAACTTATAGCCTTACCATCACAATGTTC
CAAAATGGGATCAAATCCAGAAAAATGCATCACCATTGATGCCTGTGAGA
AAGAATTTATTTTTACTCTTACAGCATCTACAAAACCAACTCTAATGATA
AAGTTTAACTTTTATCCACTCTGGGCTGACAACCAGCCACACATACAACT
CTGGAAATGGCACATTTAAAAAAGGAAAGTCCAGGAACTGGGTTTAAGCA
TCATCAAGAGCAAGCACACCAGGGAGTGTTTTGCCCTCAAGGAGCTCTAA
GCTGGCTCCACCTCCAGTGGAGATATGGCTCATCTTGTCAGCCAGACCAA
CCTTCTCTACGGCTGCAACTGAGTCACCTCCTCCAATGATTGTGGTCACT
CCCTTCCCGCTGAGCTCCGCAAGCTTCTTGGCAATTGCCTCAGTGCCAGC
AGCAAATTTATCAAATTCAAACACACCCATAGGTCCATTCCAGATGATGG
TTTTAGTAGTATCCAAAGCTTCACTGAATGA
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