DN617595

Overview
NameDN617595
Unique NameDN617595
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length581
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617595 vs. ExPASy Swiss-Prot
Match: PGK_SHEFN (Phosphoglycerate kinase OS=Shewanella frigidimarina (strain NCIMB 400) GN=pgk PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.357e-20
Identity = 48/93 (51.61%), Postives = 67/93 (72.04%), Query Frame = -1
Query:  303 SFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 581
            + ++ ++   TI+WNGP+GVFEFD+F  GT+ IA+ +A        +I GGGD++AAV+K  +ADK+S+ISTGGGA LE LEGK LP V  L+
Sbjct:  298 ALAKIIEQAGTIVWNGPVGVFEFDQFGEGTKRIAQAIANSKA---FSIAGGGDTLAAVDKYNIADKVSYISTGGGAFLEFLEGKELPAVAMLE 387          
BLAST of DN617595 vs. ExPASy Swiss-Prot
Match: PGK_PHOPR (Phosphoglycerate kinase OS=Photobacterium profundum GN=pgk PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.357e-20
Identity = 48/92 (52.17%), Postives = 64/92 (69.57%), Query Frame = -1
Query:  300 SEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 575
            +E +   KTI+WNGP+GVFEF  F AGT  IAK +A+  G  V    GGGD++AA++K G+   +S+ISTGGGA LE +EGK LP V  L++
Sbjct:  300 AEIISNAKTILWNGPVGVFEFKNFEAGTAGIAKAIADSEGFSVA---GGGDTLAAIDKFGIKADVSYISTGGGAFLEFVEGKVLPAVAMLEE 388          
BLAST of DN617595 vs. ExPASy Swiss-Prot
Match: PGK_PENCI (Phosphoglycerate kinase OS=Penicillium citrinum GN=PGKA PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.357e-20
Identity = 48/91 (52.75%), Postives = 59/91 (64.84%), Query Frame = -1
Query:  306 FSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 578
            + + +   KTI+WNGP GVFE   FA+ TEA      + +  G   IIGGGD+     K  + DK+SH+STGGGASLELLEGK LPGV AL
Sbjct:  324 YQKTIAEAKTILWNGPPGVFELKPFASATEATLDAAVKAAESGSIVIIGGGDTATVAAKYKVEDKISHVSTGGGASLELLEGKELPGVAAL 414          
BLAST of DN617595 vs. ExPASy Swiss-Prot
Match: PGK_NEIMB (Phosphoglycerate kinase OS=Neisseria meningitidis serogroup B GN=pgk PE=3 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 2.357e-20
Identity = 46/93 (49.46%), Postives = 68/93 (73.12%), Query Frame = -1
Query:  303 SFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 581
            + ++ L    T++WNGP+GVFEFD+FA GT+A+A+ +A+       +I GGGD++AA+ K G+ +++ +ISTGGGA LE LEGK LP V AL+
Sbjct:  299 ALADLLKAAGTVVWNGPVGVFEFDQFAGGTKALAEAIAQSKA---FSIAGGGDTLAAIAKFGVTEQIGYISTGGGAFLEFLEGKELPAVAALE 388          
BLAST of DN617595 vs. ExPASy Swiss-Prot
Match: PGK_NEIG1 (Phosphoglycerate kinase OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=pgk PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.357e-20
Identity = 46/93 (49.46%), Postives = 68/93 (73.12%), Query Frame = -1
Query:  303 SFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 581
            + ++ L    T++WNGP+GVFEFD+FA GT+A+A+ +A+       +I GGGD++AA+ K G+ +++ +ISTGGGA LE LEGK LP V AL+
Sbjct:  299 ALADLLKAAGTVVWNGPVGVFEFDQFAGGTKALAEAIAQSKA---FSIAGGGDTLAAIAKFGVTEQIGYISTGGGAFLEFLEGKELPAVAALE 388          
BLAST of DN617595 vs. ExPASy Swiss-Prot
Match: PGK_FRAP2 (Phosphoglycerate kinase OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=pgk PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.357e-20
Identity = 48/94 (51.06%), Postives = 66/94 (70.21%), Query Frame = -1
Query:  300 SFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 581
            + +E L +  TI+WNGP+GVFEFD FA GT+A++  +AE       ++ GGGD++AA+EK  + DK+S+IST GGA LE LEGK LP V  L +
Sbjct:  298 NIAELLKSANTILWNGPVGVFEFDNFAEGTKALSLAIAE---SDAFSVAGGGDTIAAIEKFDIKDKVSYISTAGGAFLEFLEGKKLPAVEILKE 388          
BLAST of DN617595 vs. ExPASy Swiss-Prot
Match: PGK_CAMC5 (Phosphoglycerate kinase OS=Campylobacter curvus (strain 525.92) GN=pgk PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.357e-20
Identity = 49/94 (52.13%), Postives = 64/94 (68.09%), Query Frame = -1
Query:  297 FSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 578
            F E L   +T+ WNGPMGVFE DKF+ G+  ++  + E      TT++GGGD+   VE+ G AD+M+ ISTGGGASLEL+EGK LPG+  L  A
Sbjct:  308 FKEVLADAQTVWWNGPMGVFEMDKFSKGSIKMSHAIVETHA---TTVVGGGDTADVVERAGDADEMTFISTGGGASLELIEGKELPGIKPLRKA 398          
BLAST of DN617595 vs. ExPASy Swiss-Prot
Match: PGK_ANASK (Phosphoglycerate kinase OS=Anaeromyxobacter sp. (strain K) GN=pgk PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.357e-20
Identity = 45/93 (48.39%), Postives = 63/93 (67.74%), Query Frame = -1
Query:  300 FSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 578
            + + +   KT+ WNGPMG+FE   ++ GT  +AK +A        T++GGGDS AAVE+ G+ D M H+STGGGASLE +EG+ LPGV A ++
Sbjct:  307 YRQRIAAAKTVFWNGPMGLFEQKPWSEGTFGVAKAMA---ASPAVTVVGGGDSAAAVEQAGIVDAMKHVSTGGGASLEFIEGRELPGVKACEE 396          
BLAST of DN617595 vs. ExPASy Swiss-Prot
Match: PGK_ANADF (Phosphoglycerate kinase OS=Anaeromyxobacter sp. (strain Fw109-5) GN=pgk PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.357e-20
Identity = 45/92 (48.91%), Postives = 63/92 (68.48%), Query Frame = -1
Query:  303 FSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALD 578
            + + +   KT+ WNGPMG+FE   +A GT  +A+ +A+       T++GGGDS AAVE+ GL  KM H+STGGGASLE +EG+ LPG+  L+
Sbjct:  307 YRQRIVDAKTVFWNGPMGLFEQKPWAEGTFGVAQAMAQ---SPAVTVVGGGDSAAAVEEAGLVSKMKHVSTGGGASLEFIEGRVLPGIQVLE 395          
BLAST of DN617595 vs. ExPASy Swiss-Prot
Match: PGKC_RALEH (Phosphoglycerate kinase, chromosomal OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=cbbKC PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.357e-20
Identity = 48/90 (53.33%), Postives = 64/90 (71.11%), Query Frame = -1
Query:  306 SEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 575
            +E L    TI+WNGP+GVFEFD+F  GT  +A+ +AE       +I GGGD++AA+ K G+AD++ +ISTGGGA LE LEGKTLP +  L
Sbjct:  321 AEQLKAAGTIVWNGPVGVFEFDQFGNGTRVLAQAIAESKA---FSIAGGGDTLAAIAKHGIADRVGYISTGGGAFLEFLEGKTLPALAVL 407          
The following BLAST results are available for this feature:
BLAST of DN617595 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_SHEFN2.357e-2051.61Phosphoglycerate kinase OS=Shewanella frigidimarin... [more]
PGK_PHOPR2.357e-2052.17Phosphoglycerate kinase OS=Photobacterium profundu... [more]
PGK_PENCI2.357e-2052.75Phosphoglycerate kinase OS=Penicillium citrinum GN... [more]
PGK_NEIMB2.357e-2049.46Phosphoglycerate kinase OS=Neisseria meningitidis ... [more]
PGK_NEIG12.357e-2049.46Phosphoglycerate kinase OS=Neisseria gonorrhoeae (... [more]
PGK_FRAP22.357e-2051.06Phosphoglycerate kinase OS=Francisella philomiragi... [more]
PGK_CAMC52.357e-2052.13Phosphoglycerate kinase OS=Campylobacter curvus (s... [more]
PGK_ANASK2.357e-2048.39Phosphoglycerate kinase OS=Anaeromyxobacter sp. (s... [more]
PGK_ANADF2.357e-2048.91Phosphoglycerate kinase OS=Anaeromyxobacter sp. (s... [more]
PGKC_RALEH2.357e-2053.33Phosphoglycerate kinase, chromosomal OS=Ralstonia ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01G20_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001G20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617595 ID=DN617595; Name=DN617595; organism=Citrus sinensis; type=EST; length=581bp
GGATTCATGCATTATCTAACAATCATCAACGGCTCATTGTGATCAGAAAG
GAACAAGAACTTGACTTCAGGAAACTTATAGCCTTACCATCACAATGTTC
CAAAATGGGATCAAATCCAGAAAAATGCATCACCATTGATGCCTGTGAGA
AAGAATTTATTTTTACTCTTACAGCATCTACAAAACCAACTCTAATGATA
AAGTTTAACTTTTATCCACTCTGGGCTGACAACCAGCCACACATACAACT
CTGGAAATGGCACATTTAAAAAAGGAAAGTCCAGGAACTGGGTTTAAGCA
TCATCAAGAGCAAGCACACCAGGGAGTGTTTTGCCCTCAAGGAGCTCTAA
GCTGGCTCCACCTCCAGTGGAGATATGGCTCATCTTGTCAGCCAGACCAA
CCTTCTCTACGGCTGCAACTGAGTCACCTCCTCCAATGATTGTGGTCACT
CCCTTCCCGCTGAGCTCCGCAAGCTTCTTGGCAATTGCCTCAGTGCCAGC
AGCAAATTTATCAAATTCAAACACACCCATAGGTCCATTCCAGATGATGG
TTTTAGTAGTATCCAAAGCTTCACTGAATGA
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